RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 ZDHHC4Q9NPG8 344 aa11.34□□□□□ -0.59
USP49-204ENST00000423567 ELOVL2Q9NXB9 296 aa11.34□□□□□ -0.59
USP49-204ENST00000423567 STIM2Q9P246 746 aa11.34□□□□□ -0.59
USP49-204ENST00000423567 PIEZO1Q92508 2521 aa11.34□□□□□ -0.59
USP49-204ENST00000423567 ANTXRLA6NF34 631 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 GFRA2O00451 464 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 ARHGAP33O14559 1287 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 HRO43593 1189 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 ADAM23O75077 832 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 PABPC1P11940 636 aaKnown RBP11.33□□□□□ -0.6
USP49-204ENST00000423567 HNRNPLP14866 589 aaKnown RBP eCLIP11.33□□□□□ -0.61e-10■■■■■ 34.2
USP49-204ENST00000423567 CHRNB2P17787 502 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 TACR2P21452 398 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 MMP8P22894 467 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 WASP42768 502 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 UBASH3AP57075 661 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 PITX1P78337 314 aaPredicted RBP11.33□□□□□ -0.6
USP49-204ENST00000423567 DEUP1Q05D60 604 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 SRSF5Q13243 272 aaKnown RBP11.33□□□□□ -0.6
USP49-204ENST00000423567 NR1I3Q14994 352 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 ASIC2Q16515 512 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 LPAL2Q16609 132 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 GEN1Q17RS7 908 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 CLEC16AQ2KHT3 1053 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 SLC25A52Q3SY17 297 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 C2CD6Q53TS8 623 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 RABGAP1LQ5R372 815 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 TTC39BQ5VTQ0 682 aaPredicted RBP11.33□□□□□ -0.6
USP49-204ENST00000423567 SFMBT2Q5VUG0 894 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 RAP1GAP2Q684P5 730 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 NADSYN1Q6IA69 706 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 CHST9Q7L1S5 443 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 ARCQ7LC44 396 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 CARNMT1Q8N4J0 409 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 SLC30A5Q8TAD4 765 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 HMGB4Q8WW32 186 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 P2RY11Q96G91 374 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 SPACA7Q96KW9 195 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 NAP1L5Q96NT1 182 aaPredicted RBP11.33□□□□□ -0.6
USP49-204ENST00000423567 C11orf70Q9BRQ4 267 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 NUP58Q9BVL2 599 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 EDEM3Q9BZQ6 932 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 NUCKS1Q9H1E3 243 aaKnown RBP11.33□□□□□ -0.6
USP49-204ENST00000423567 TSPY26PQ9H489 355 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 WDCPQ9H6R7 721 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 ABCB8Q9NUT2 735 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 CACNA2D2Q9NY47 1150 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 ADAM22Q9P0K1 906 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 GGA2Q9UJY4 613 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 CLEC4EQ9ULY5 219 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 PLA2G4CQ9UP65 541 aa11.33□□□□□ -0.6
USP49-204ENST00000423567 ANKRD62A6NC57 917 aa11.32□□□□□ -0.6
USP49-204ENST00000423567 LRRC53A6NM62 1247 aa11.32□□□□□ -0.6
USP49-204ENST00000423567 H0Y626 953 aa11.32□□□□□ -0.6
USP49-204ENST00000423567 SYNCRIPO60506 623 aaKnown RBP11.32□□□□□ -0.6
USP49-204ENST00000423567 LUC7L3O95232 432 aaKnown RBP11.32□□□□□ -0.6
USP49-204ENST00000423567 MOCS3O95396 460 aa11.32□□□□□ -0.6
USP49-204ENST00000423567 ATP5BP06576 529 aaKnown RBP11.32□□□□□ -0.6
USP49-204ENST00000423567 UNGP13051 313 aaPredicted RBP11.32□□□□□ -0.6
USP49-204ENST00000423567 POLR2EP19388 210 aaKnown RBP11.32□□□□□ -0.6
USP49-204ENST00000423567 TNFAIP3P21580 790 aa11.32□□□□□ -0.6
USP49-204ENST00000423567 HLA-FP30511 346 aa11.32□□□□□ -0.6
USP49-204ENST00000423567 HOXC13P31276 330 aa11.32□□□□□ -0.6
USP49-204ENST00000423567 SDC4P31431 198 aa11.32□□□□□ -0.6
USP49-204ENST00000423567 SGSHP51688 502 aa11.32□□□□□ -0.6
USP49-204ENST00000423567 RPS24P62847 133 aaKnown RBP11.32□□□□□ -0.6
USP49-204ENST00000423567 CENPCQ03188 943 aa11.32□□□□□ -0.6
USP49-204ENST00000423567 EIF4EBP2Q13542 120 aaPredicted RBP11.32□□□□□ -0.6
USP49-204ENST00000423567 ELF2Q15723 593 aa11.32□□□□□ -0.6
USP49-204ENST00000423567 BRMS1LQ5PSV4 323 aa11.32□□□□□ -0.6
USP49-204ENST00000423567 ACBD5Q5T8D3 534 aaPredicted RBP11.32□□□□□ -0.6
USP49-204ENST00000423567 SERPINA13PQ6UXR4 307 aa11.32□□□□□ -0.6
USP49-204ENST00000423567 RASSF3Q86WH2 238 aa11.32□□□□□ -0.6
USP49-204ENST00000423567 GPR161Q8N6U8 529 aaKnown RBP11.32□□□□□ -0.6
USP49-204ENST00000423567 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.32□□□□□ -0.6
USP49-204ENST00000423567 MDGA1Q8NFP4 955 aa11.32□□□□□ -0.6
USP49-204ENST00000423567 FIBINQ8TAL6 211 aa11.32□□□□□ -0.6
USP49-204ENST00000423567 IQCDQ96DY2 449 aa11.32□□□□□ -0.6
USP49-204ENST00000423567 PGAP3Q96FM1 320 aaPredicted RBP11.32□□□□□ -0.6
USP49-204ENST00000423567 PRICKLE1Q96MT3 831 aaPredicted RBP11.32□□□□□ -0.6
USP49-204ENST00000423567 PCDHB18PQ96TA0 734 aa11.32□□□□□ -0.6
USP49-204ENST00000423567 ACOX2Q99424 681 aa11.32□□□□□ -0.6
USP49-204ENST00000423567 NPY6RQ99463 290 aa11.32□□□□□ -0.6
USP49-204ENST00000423567 GABRG3Q99928 467 aa11.32□□□□□ -0.6
USP49-204ENST00000423567 SELENOOQ9BVL4 669 aa11.32□□□□□ -0.6
USP49-204ENST00000423567 TPSD1Q9BZJ3 242 aa11.32□□□□□ -0.6
USP49-204ENST00000423567 METTL5Q9NRN9 209 aaKnown RBP11.32□□□□□ -0.6
USP49-204ENST00000423567 THAP10Q9P2Z0 257 aaPredicted RBP11.32□□□□□ -0.6
USP49-204ENST00000423567 XPO7Q9UIA9 1087 aaKnown RBP11.32□□□□□ -0.6
USP49-204ENST00000423567 STON1Q9Y6Q2 735 aa11.32□□□□□ -0.6
USP49-204ENST00000423567 ZFHX2Q9C0A1 2572 aaPredicted RBP11.31□□□□□ -0.6
USP49-204ENST00000423567 CBFA2T2O43439 604 aa11.31□□□□□ -0.6
USP49-204ENST00000423567 PAGE1O75459 146 aa11.31□□□□□ -0.6
USP49-204ENST00000423567 RHOBTB1O94844 696 aa11.31□□□□□ -0.6
USP49-204ENST00000423567 RETP07949 1114 aa11.31□□□□□ -0.6
USP49-204ENST00000423567 KRT3P12035 628 aa11.31□□□□□ -0.6
USP49-204ENST00000423567 PDGFRAP16234 1089 aa11.31□□□□□ -0.6
USP49-204ENST00000423567 DESP17661 470 aa11.31□□□□□ -0.6
USP49-204ENST00000423567 RDXP35241 583 aaKnown RBP11.31□□□□□ -0.6
USP49-204ENST00000423567 FLT3P36888 993 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms