RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 PMF1Q6P1K2 205 aa16.79■□□□□ 0.28
COL18A1-205ENST00000423214 ADIPOR2Q86V24 386 aa16.79■□□□□ 0.28
COL18A1-205ENST00000423214 CCDC117Q8IWD4 279 aaPredicted RBP16.79■□□□□ 0.28
COL18A1-205ENST00000423214 HJURPQ8NCD3 748 aaPredicted RBP16.79■□□□□ 0.28
COL18A1-205ENST00000423214 ENGASEQ8NFI3 743 aa16.79■□□□□ 0.28
COL18A1-205ENST00000423214 SPATA20Q8TB22 786 aa16.79■□□□□ 0.28
COL18A1-205ENST00000423214 WFDC5Q8TCV5 224 aa16.79■□□□□ 0.28
COL18A1-205ENST00000423214 DDX50Q9BQ39 737 aaKnown RBP16.79■□□□□ 0.28
COL18A1-205ENST00000423214 IRX2Q9BZI1 471 aaPredicted RBP16.79■□□□□ 0.28
COL18A1-205ENST00000423214 BTBD1Q9H0C5 482 aa16.79■□□□□ 0.28
COL18A1-205ENST00000423214 IL21RQ9HBE5 538 aa16.79■□□□□ 0.28
COL18A1-205ENST00000423214 STIM2Q9P246 746 aa16.79■□□□□ 0.28
COL18A1-205ENST00000423214 PCOLCE2Q9UKZ9 415 aa16.79■□□□□ 0.28
COL18A1-205ENST00000423214 GOLGA4Q13439 2230 aaKnown RBP16.78■□□□□ 0.28
COL18A1-205ENST00000423214 ADAMTS20P59510 1910 aa16.78■□□□□ 0.28
COL18A1-205ENST00000423214 CACNA1GO43497 2377 aa16.78■□□□□ 0.28
COL18A1-205ENST00000423214 A0A1B0GVT2 93 aa16.78■□□□□ 0.28
COL18A1-205ENST00000423214 FLRT2O43155 660 aa16.78■□□□□ 0.28
COL18A1-205ENST00000423214 ACSL4O60488 711 aa16.78■□□□□ 0.28
COL18A1-205ENST00000423214 ZNF883P0CG24 379 aa16.78■□□□□ 0.28
COL18A1-205ENST00000423214 CD70P32970 193 aa16.78■□□□□ 0.28
COL18A1-205ENST00000423214 ACSL1P33121 698 aa16.78■□□□□ 0.28
COL18A1-205ENST00000423214 RING1Q06587 406 aa16.78■□□□□ 0.28
COL18A1-205ENST00000423214 CNGA2Q16280 664 aa16.78■□□□□ 0.28
COL18A1-205ENST00000423214 FAM133BQ5BKY9 247 aaKnown RBP16.78■□□□□ 0.28
COL18A1-205ENST00000423214 PIK3R6Q5UE93 754 aa16.78■□□□□ 0.28
COL18A1-205ENST00000423214 ISM2Q6H9L7 571 aa16.78■□□□□ 0.28
COL18A1-205ENST00000423214 CLEC4CQ8WTT0 213 aa16.78■□□□□ 0.28
COL18A1-205ENST00000423214 SLC35F5Q8WV83 523 aa16.78■□□□□ 0.28
COL18A1-205ENST00000423214 ADAMTS14Q8WXS8 1223 aa16.78■□□□□ 0.28
COL18A1-205ENST00000423214 FAM149B1Q96BN6 582 aa16.78■□□□□ 0.28
COL18A1-205ENST00000423214 DHTKD1Q96HY7 919 aaPredicted RBP16.78■□□□□ 0.28
COL18A1-205ENST00000423214 SERPINB11Q96P15 392 aa16.78■□□□□ 0.28
COL18A1-205ENST00000423214 MIS12Q9H081 205 aa16.78■□□□□ 0.28
COL18A1-205ENST00000423214 C6orf106Q9H6K1 298 aaPredicted RBP16.78■□□□□ 0.28
COL18A1-205ENST00000423214 FNDC3AQ9Y2H6 1198 aaKnown RBP16.78■□□□□ 0.28
COL18A1-205ENST00000423214 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.78■□□□□ 0.28
COL18A1-205ENST00000423214 DMXL2Q8TDJ6 3036 aa16.78■□□□□ 0.28
COL18A1-205ENST00000423214 ACACAQ13085 2346 aa16.78■□□□□ 0.28
COL18A1-205ENST00000423214 GOLGA6L7A0A1B0GV03 622 aa16.77■□□□□ 0.28
COL18A1-205ENST00000423214 PMM2O15305 246 aa16.77■□□□□ 0.28
COL18A1-205ENST00000423214 P4HA2O15460 535 aa16.77■□□□□ 0.28
COL18A1-205ENST00000423214 SART1O43290 800 aaKnown RBP16.77■□□□□ 0.28
COL18A1-205ENST00000423214 SLC6A4P31645 630 aa16.77■□□□□ 0.28
COL18A1-205ENST00000423214 RPS14P62263 151 aaKnown RBP16.77■□□□□ 0.28
COL18A1-205ENST00000423214 CDH18Q13634 790 aa16.77■□□□□ 0.28
COL18A1-205ENST00000423214 PTPRNQ16849 979 aa16.77■□□□□ 0.28
COL18A1-205ENST00000423214 HLA-BQ31612 363 aa16.77■□□□□ 0.28
COL18A1-205ENST00000423214 ADAT2Q7Z6V5 191 aaKnown RBP16.77■□□□□ 0.28
COL18A1-205ENST00000423214 KIAA0907Q7Z7F0 614 aaPredicted RBP16.77■□□□□ 0.28
COL18A1-205ENST00000423214 PNPLA1Q8N8W4 532 aa16.77■□□□□ 0.28
COL18A1-205ENST00000423214 GANCQ8TET4 914 aa16.77■□□□□ 0.28
COL18A1-205ENST00000423214 KAT5Q92993 513 aa16.77■□□□□ 0.28
COL18A1-205ENST00000423214 HSFY1Q96LI6 401 aa16.77■□□□□ 0.28
COL18A1-205ENST00000423214 PRICKLE1Q96MT3 831 aaPredicted RBP16.77■□□□□ 0.28
COL18A1-205ENST00000423214 TIGD1Q96MW7 591 aa16.77■□□□□ 0.28
COL18A1-205ENST00000423214 PRSS16Q9NQE7 514 aa16.77■□□□□ 0.28
COL18A1-205ENST00000423214 ST7Q9NRC1 585 aa16.77■□□□□ 0.28
COL18A1-205ENST00000423214 SUN2Q9UH99 717 aa16.77■□□□□ 0.28
COL18A1-205ENST00000423214 NCKAP1Q9Y2A7 1128 aa16.77■□□□□ 0.28
COL18A1-205ENST00000423214 BICDL2A1A5D9 508 aa16.76■□□□□ 0.27
COL18A1-205ENST00000423214 FAM221BA6H8Z2 402 aa16.76■□□□□ 0.27
COL18A1-205ENST00000423214 RNASEH1O60930 286 aaKnown RBP16.76■□□□□ 0.27
COL18A1-205ENST00000423214 GADD45BO75293 160 aaPredicted RBP16.76■□□□□ 0.27
COL18A1-205ENST00000423214 FSBPO95073 299 aa16.76■□□□□ 0.27
COL18A1-205ENST00000423214 MOCS2O96007 188 aaPredicted RBP16.76■□□□□ 0.27
COL18A1-205ENST00000423214 ASLP04424 464 aa16.76■□□□□ 0.27
COL18A1-205ENST00000423214 GRIA4P48058 902 aa16.76■□□□□ 0.27
COL18A1-205ENST00000423214 CSNK1EP49674 416 aaKnown RBP16.76■□□□□ 0.27
COL18A1-205ENST00000423214 BNC1Q01954 994 aa16.76■□□□□ 0.27
COL18A1-205ENST00000423214 RRAGAQ7L523 313 aa16.76■□□□□ 0.27
COL18A1-205ENST00000423214 GLRX5Q86SX6 157 aa16.76■□□□□ 0.27
COL18A1-205ENST00000423214 ARHGEF19Q8IW93 802 aa16.76■□□□□ 0.27
COL18A1-205ENST00000423214 CARNMT1Q8N4J0 409 aa16.76■□□□□ 0.27
COL18A1-205ENST00000423214 TRIM62Q9BVG3 475 aa16.76■□□□□ 0.27
COL18A1-205ENST00000423214 SGK2Q9HBY8 427 aa16.76■□□□□ 0.27
COL18A1-205ENST00000423214 TM9SF3Q9HD45 589 aa16.76■□□□□ 0.27
COL18A1-205ENST00000423214 MAN1B1Q9UKM7 699 aa16.76■□□□□ 0.27
COL18A1-205ENST00000423214 CTNND2Q9UQB3 1225 aa16.76■□□□□ 0.27
COL18A1-205ENST00000423214 TLR6Q9Y2C9 796 aa16.76■□□□□ 0.27
COL18A1-205ENST00000423214 CEP83Q9Y592 693 aa16.76■□□□□ 0.27
COL18A1-205ENST00000423214 FREM2Q5SZK8 3169 aa16.76■□□□□ 0.27
COL18A1-205ENST00000423214 DSPP15924 2871 aaKnown RBP16.75■□□□□ 0.27
COL18A1-205ENST00000423214 COL5A1P20908 1838 aaPredicted RBP16.75■□□□□ 0.27
COL18A1-205ENST00000423214 RNF225M0QZC1 329 aaPredicted RBP16.75■□□□□ 0.27
COL18A1-205ENST00000423214 CAPN9O14815 690 aa16.75■□□□□ 0.27
COL18A1-205ENST00000423214 CBFA2T3O75081 653 aa16.75■□□□□ 0.27
COL18A1-205ENST00000423214 GABBR2O75899 941 aa16.75■□□□□ 0.27
COL18A1-205ENST00000423214 CALCAP01258 141 aa16.75■□□□□ 0.27
COL18A1-205ENST00000423214 APOEP02649 317 aa16.75■□□□□ 0.27
COL18A1-205ENST00000423214 KRT5P13647 590 aa16.75■□□□□ 0.27
COL18A1-205ENST00000423214 CD44P16070 742 aaKnown RBP16.75■□□□□ 0.27
COL18A1-205ENST00000423214 GCNT1Q02742 428 aa16.75■□□□□ 0.27
COL18A1-205ENST00000423214 NNTQ13423 1086 aa16.75■□□□□ 0.27
COL18A1-205ENST00000423214 SUZ12Q15022 739 aaKnown RBP16.75■□□□□ 0.27
COL18A1-205ENST00000423214 NADSYN1Q6IA69 706 aa16.75■□□□□ 0.27
COL18A1-205ENST00000423214 C1orf216Q8TAB5 229 aa16.75■□□□□ 0.27
COL18A1-205ENST00000423214 DQX1Q8TE96 717 aaKnown RBP16.75■□□□□ 0.27
COL18A1-205ENST00000423214 NELFBQ8WX92 580 aa16.75■□□□□ 0.27
COL18A1-205ENST00000423214 AZIN2Q96A70 460 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms