RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 CLCN6P51797 869 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 MBTD1Q05BQ5 628 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 GRSF1Q12849 480 aaKnown RBP eCLIP11□□□□□ -0.65
PTCH1-206ENST00000421141 HTR3CQ8WXA8 447 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 MFSD14AQ96MC6 490 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 LRRC1Q9BTT6 524 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 TUBGCP4Q9UGJ1 667 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 TDRKHQ9Y2W6 561 aaKnown RBP11□□□□□ -0.65
PTCH1-206ENST00000421141 UBR3Q6ZT12 1888 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 ASTN1O14525 1302 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 GYG2O15488 501 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 CCNG1P51959 295 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 CDH17Q12864 832 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 FAM47EQ6ZV65 393 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 PRKD2Q9BZL6 878 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 DCDC2Q9UHG0 476 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 COL2A1P02458 1487 aaPredicted RBP11□□□□□ -0.65
PTCH1-206ENST00000421141 ALOX15P16050 662 aaPredicted RBP11□□□□□ -0.65
PTCH1-206ENST00000421141 EPB42P16452 691 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 PURAQ00577 322 aaKnown RBP11□□□□□ -0.65
PTCH1-206ENST00000421141 ITGA9Q13797 1035 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 FAXCQ5TGI0 409 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 FAM183BPQ6ZVS7 135 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 SCLYQ96I15 445 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 SAMD11Q96NU1 681 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 NEUROG2Q9H2A3 272 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 TMEM161AQ9NX61 479 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 DCTN4Q9UJW0 460 aa11□□□□□ -0.65
PTCH1-206ENST00000421141 STMN1P16949 149 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 CNTFP26441 200 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 GGCXP38435 758 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 VEGFBP49765 207 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 ERVK-21P61565 698 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 ZC3H12AQ5D1E8 599 aaKnown RBP10.99□□□□□ -0.65
PTCH1-206ENST00000421141 DENND1BQ6P3S1 775 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 STK40Q8N2I9 435 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 C12orf29Q8N999 325 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 SHDQ96IW2 340 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 MLXIPLQ9NP71 852 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 AVENQ9NQS1 362 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-206ENST00000421141 AASDHPPTQ9NRN7 309 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 CAPN7Q9Y6W3 813 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 GRM6O15303 877 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 CCNE2O96020 404 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 MAPK7Q13164 816 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 ZNF618Q5T7W0 954 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 GRAMD4Q6IC98 578 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 DBF4BQ8NFT6 615 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 TNIP2Q8NFZ5 429 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 MYCBPAPQ8TBZ2 947 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 GPR152Q8TDT2 470 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 GRAMD1AQ96CP6 724 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 TBL1YQ9BQ87 522 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 FAM153AQ9UHL3 310 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 SOAT1P35610 550 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 INSCQ1MX18 579 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 ZBTB41Q5SVQ8 909 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 RARS2Q5T160 578 aaKnown RBP10.99□□□□□ -0.65
PTCH1-206ENST00000421141 LRRC6Q86X45 466 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 NAT16Q8N8M0 369 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 ELMO3Q96BJ8 720 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 YY1AP1Q9H869 796 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 TJP1Q07157 1748 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 O00370 1275 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 ADRB2P07550 413 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 GLI1P08151 1106 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 ARHGAP1Q07960 439 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 PPP3CAQ08209 521 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 FAM133BQ5BKY9 247 aaKnown RBP10.99□□□□□ -0.65
PTCH1-206ENST00000421141 VARS2Q5ST30 1063 aaKnown RBP10.99□□□□□ -0.65
PTCH1-206ENST00000421141 GDF6Q6KF10 455 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-206ENST00000421141 FAM35AQ86V20 835 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 TRAPPC5Q8IUR0 188 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 SLC35C1Q96A29 364 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 USP54Q70EL1 1684 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 TRIP12Q14669 1992 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-206ENST00000421141 A0A0B4J269 797 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 ZNF792Q3KQV3 632 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 DOK6Q6PKX4 331 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 ZFP42Q96MM3 310 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 DEC1Q9P2X7 70 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 GON4LQ3T8J9 2241 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 SMIM28A0A1B0GU29 152 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 PYGBP11216 843 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 MIPP30301 263 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 MPPE1Q53F39 396 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 MROH9Q5TGP6 573 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 KAT2BQ92831 832 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 PACSIN1Q9BY11 444 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 EIF2AQ9BY44 585 aaKnown RBP10.99□□□□□ -0.65
PTCH1-206ENST00000421141 RUBCNLQ9H714 662 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 DNAJC18Q9H819 358 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 WDR41Q9HAD4 459 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 RBM12Q9NTZ6 932 aaKnown RBP10.99□□□□□ -0.65
PTCH1-206ENST00000421141 CLDND1Q9NY35 253 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 C6orf203Q9P0P8 240 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-206ENST00000421141 MCM3APO60318 1980 aa10.99□□□□□ -0.65
PTCH1-206ENST00000421141 A0A087X0B3 334 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 PTPN7P35236 360 aa10.98□□□□□ -0.65
PTCH1-206ENST00000421141 BRCC3P46736 316 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms