RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 DRGXA6NNA5 263 aa12.9□□□□□ -0.34
TMEM53-206ENST00000420706 E9PAM4 449 aa12.9□□□□□ -0.34
TMEM53-206ENST00000420706 EEF2KO00418 725 aaKnown RBP12.9□□□□□ -0.34
TMEM53-206ENST00000420706 GFRA2O00451 464 aa12.9□□□□□ -0.34
TMEM53-206ENST00000420706 SRGAP2O75044 1071 aa12.9□□□□□ -0.34
TMEM53-206ENST00000420706 LRIG2O94898 1065 aa12.9□□□□□ -0.34
TMEM53-206ENST00000420706 GOT1P17174 413 aa12.9□□□□□ -0.34
TMEM53-206ENST00000420706 TCP1P17987 556 aaKnown RBP12.9□□□□□ -0.34
TMEM53-206ENST00000420706 CXCR5P32302 372 aa12.9□□□□□ -0.34
TMEM53-206ENST00000420706 ARL4AP40617 200 aa12.9□□□□□ -0.34
TMEM53-206ENST00000420706 CDKN2BP42772 138 aa12.9□□□□□ -0.34
TMEM53-206ENST00000420706 COPS2P61201 443 aa12.9□□□□□ -0.34
TMEM53-206ENST00000420706 AMPD2Q01433 879 aa12.9□□□□□ -0.34
TMEM53-206ENST00000420706 MMRN1Q13201 1228 aa12.9□□□□□ -0.34
TMEM53-206ENST00000420706 PUS10Q3MIT2 529 aaKnown RBP12.9□□□□□ -0.34
TMEM53-206ENST00000420706 ANKRD20A8PQ5CZ79 823 aa12.9□□□□□ -0.34
TMEM53-206ENST00000420706 MANEALQ5VSG8 457 aa12.9□□□□□ -0.34
TMEM53-206ENST00000420706 PTCRAQ6ISU1 281 aaPredicted RBP12.9□□□□□ -0.34
TMEM53-206ENST00000420706 RFWD3Q6PCD5 774 aa12.9□□□□□ -0.34
TMEM53-206ENST00000420706 PARM1Q6UWI2 310 aa12.9□□□□□ -0.34
TMEM53-206ENST00000420706 LRRC31Q6UY01 552 aa12.9□□□□□ -0.34
TMEM53-206ENST00000420706 CHSY1Q86X52 802 aa12.9□□□□□ -0.34
TMEM53-206ENST00000420706 CCDC50Q8IVM0 306 aa12.9□□□□□ -0.34
TMEM53-206ENST00000420706 MFSD6LQ8IWD5 586 aa12.9□□□□□ -0.34
TMEM53-206ENST00000420706 LGI2Q8N0V4 545 aa12.9□□□□□ -0.34
TMEM53-206ENST00000420706 CPXM2Q8N436 756 aa12.9□□□□□ -0.34
TMEM53-206ENST00000420706 IGSF8Q969P0 613 aa12.9□□□□□ -0.34
TMEM53-206ENST00000420706 ELSPBP1Q96BH3 223 aa12.9□□□□□ -0.34
TMEM53-206ENST00000420706 FAF2Q96CS3 445 aa12.9□□□□□ -0.34
TMEM53-206ENST00000420706 MYEOVQ96EZ4 313 aa12.9□□□□□ -0.34
TMEM53-206ENST00000420706 RNF157Q96PX1 679 aa12.9□□□□□ -0.34
TMEM53-206ENST00000420706 ZNF670Q9BS34 389 aa12.9□□□□□ -0.34
TMEM53-206ENST00000420706 RCOR3Q9P2K3 495 aaPredicted RBP12.9□□□□□ -0.34
TMEM53-206ENST00000420706 PPARGC1AQ9UBK2 798 aaKnown RBP12.9□□□□□ -0.34
TMEM53-206ENST00000420706 VANGL2Q9ULK5 521 aa12.9□□□□□ -0.34
TMEM53-206ENST00000420706 CDH23Q9H251 3354 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 IGLV3-10A0A075B6K4 115 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 hCG_1818297A0A087WSY0 165 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 ZNF487B1APH4 448 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 C2CD4DB7Z1M9 353 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 ANHXE9PGG2 379 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 F5H5T6 163 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 H3BRJ5 948 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 CES2O00748 559 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 TRDMT1O14717 391 aaKnown RBP12.89□□□□□ -0.35
TMEM53-206ENST00000420706 SLC9A3R1O14745 358 aaPredicted RBP12.89□□□□□ -0.35
TMEM53-206ENST00000420706 TSPAN3O60637 253 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 ECI2O75521 394 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 AMPD1P23109 780 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 SP100P23497 879 aaPredicted RBP12.89□□□□□ -0.35
TMEM53-206ENST00000420706 HOXC13P31276 330 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 HTR7P34969 479 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 PTPN7P35236 360 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 CHKAP35790 457 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 CETN2P41208 172 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 TPI1P60174 286 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 TFF2Q03403 129 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 LLGL1Q15334 1064 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 PPP2R5EQ16537 467 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 TFDP3Q5H9I0 405 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 SEL1L2Q5TEA6 688 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 VITQ6UXI7 678 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 RFX8Q6ZV50 586 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 ADGRG2Q8IZP9 1017 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 RASGEF1CQ8N431 466 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 KIF18AQ8NI77 898 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 PCDH19Q8TAB3 1148 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 COG1Q8WTW3 980 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 OSCP1Q8WVF1 389 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 FGF14Q92915 247 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 OTUB2Q96DC9 234 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 TBC1D31Q96DN5 1066 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 CSPG4P5Q96PW8 444 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 EPAS1Q99814 870 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 RPP25Q9BUL9 199 aaKnown RBP12.89□□□□□ -0.35
TMEM53-206ENST00000420706 CALN1Q9BXU9 219 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 STIM2Q9P246 746 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 BRWD1Q9NSI6 2320 aa12.89□□□□□ -0.35
TMEM53-206ENST00000420706 ZNF185O15231 689 aa12.88□□□□□ -0.35
TMEM53-206ENST00000420706 DAPK3O43293 454 aa12.88□□□□□ -0.35
TMEM53-206ENST00000420706 CEP104O60308 925 aa12.88□□□□□ -0.35
TMEM53-206ENST00000420706 KRT10P13645 584 aa12.88□□□□□ -0.35
TMEM53-206ENST00000420706 IL9P15248 144 aa12.88□□□□□ -0.35
TMEM53-206ENST00000420706 ERCC2P18074 760 aa12.88□□□□□ -0.35
TMEM53-206ENST00000420706 SGSHP51688 502 aa12.88□□□□□ -0.35
TMEM53-206ENST00000420706 ADCY2Q08462 1091 aa12.88□□□□□ -0.35
TMEM53-206ENST00000420706 FCHO2Q0JRZ9 810 aa12.88□□□□□ -0.35
TMEM53-206ENST00000420706 DPYSQ14117 519 aa12.88□□□□□ -0.35
TMEM53-206ENST00000420706 ALFQ53S48 1182 aa12.88□□□□□ -0.35
TMEM53-206ENST00000420706 MTSS1LQ765P7 747 aa12.88□□□□□ -0.35
TMEM53-206ENST00000420706 RFX6Q8HWS3 928 aa12.88□□□□□ -0.35
TMEM53-206ENST00000420706 ZDHHC14Q8IZN3 488 aa12.88□□□□□ -0.35
TMEM53-206ENST00000420706 PLCD3Q8N3E9 789 aa12.88□□□□□ -0.35
TMEM53-206ENST00000420706 PQLC3Q8N755 202 aa12.88□□□□□ -0.35
TMEM53-206ENST00000420706 TDRD5Q8NAT2 981 aaKnown RBP12.88□□□□□ -0.35
TMEM53-206ENST00000420706 TMA16Q96EY4 203 aaKnown RBP12.88□□□□□ -0.35
TMEM53-206ENST00000420706 RPGRIP1Q96KN7 1286 aa12.88□□□□□ -0.35
TMEM53-206ENST00000420706 RPRD1AQ96P16 312 aaPredicted RBP12.88□□□□□ -0.35
TMEM53-206ENST00000420706 KXD1Q9BQD3 176 aa12.88□□□□□ -0.35
TMEM53-206ENST00000420706 FAM83CQ9BQN1 747 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms