RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 MFSD11O43934 449 aa13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 LSM8O95777 96 aaKnown RBP13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 FESP07332 822 aa13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 TGM2P21980 687 aa13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 RBP5P82980 135 aa13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 ROR2Q01974 943 aaKnown RBP13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 ARHGAP17Q68EM7 881 aa13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 SLC45A3Q96JT2 553 aa13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 CDHR5Q9HBB8 845 aa13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 PDLIM7Q9NR12 457 aa13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 LRCH1Q9Y2L9 728 aa13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 SMAPO00193 183 aa13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 RFPL1O75677 317 aa13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 LTFP02788 710 aa13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 NCAM1P13591 858 aa13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 GSTT1P30711 240 aa13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 TRIM74Q86UV6 250 aa13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 TRIM73Q86UV7 250 aa13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 MFN1Q8IWA4 741 aa13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 ZFP42Q96MM3 310 aa13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 GRIP2Q9C0E4 1043 aa13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 RNF39Q9H2S5 420 aa13.56□□□□□ -0.24
TNFRSF8-203ENST00000417814 TCEA3O75764 348 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 CPA3P15088 417 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 RTP1P59025 263 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 PDE1CQ14123 709 aaPredicted RBP13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 PDK1Q15118 436 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 TWF2Q6IBS0 349 aaKnown RBP13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 NAT14Q8WUY8 206 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 TFB1MQ8WVM0 346 aaKnown RBP13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 HTR3CQ8WXA8 447 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 OR52B2Q96RD2 323 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 NDNQ99608 321 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 POPDC2Q9HBU9 364 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 EURLQ9NYK6 297 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 BARX2Q9UMQ3 279 aaPredicted RBP13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 STRCQ7RTU9 1775 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 HDAC4P56524 1084 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 TAP1Q03518 808 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 TMED1Q13445 227 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 GK3PQ14409 553 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 CTC1Q2NKJ3 1217 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 SFT2D3Q587I9 215 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 EFHC1Q5JVL4 640 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 SATL1Q86VE3 508 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 REPS2Q8NFH8 660 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 SPATA22Q8NHS9 363 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 PIWIL2Q8TC59 973 aaKnown RBP13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 LRGUKQ96M69 825 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 EPAS1Q99814 870 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 FOXP3Q9BZS1 431 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 USP29Q9HBJ7 922 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 A0A096LPK6 155 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 C2CD4BA6NLJ0 364 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 RNASEH1O60930 286 aaKnown RBP13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 CILPO75339 1184 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 MYCP01106 439 aaPredicted RBP13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 BPGMP07738 259 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 VDRP11473 427 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 ALADP13716 330 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 ARPP19P56211 112 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 CNGA3Q16281 694 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 SLC9B1Q4ZJI4 515 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 NOMO2Q5JPE7 1267 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 SYPL2Q5VXT5 272 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 FRMD7Q6ZUT3 714 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 HFE2Q6ZVN8 426 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 P2RY11Q96G91 374 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 B3GALT6Q96L58 329 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 LENG8Q96PV6 779 aaPredicted RBP13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 NPAS2Q99743 824 aa13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 EBNA1BP2Q99848 306 aaKnown RBP13.55□□□□□ -0.24
TNFRSF8-203ENST00000417814 SIN3BO75182 1162 aa13.54□□□□□ -0.24
TNFRSF8-203ENST00000417814 NPM3O75607 178 aaKnown RBP13.54□□□□□ -0.24
TNFRSF8-203ENST00000417814 MT-ND1P03886 318 aa13.54□□□□□ -0.24
TNFRSF8-203ENST00000417814 LYNP07948 512 aa13.54□□□□□ -0.24
TNFRSF8-203ENST00000417814 RPL10P27635 214 aaKnown RBP13.54□□□□□ -0.24
TNFRSF8-203ENST00000417814 PRPSAP1Q14558 356 aa13.54□□□□□ -0.24
TNFRSF8-203ENST00000417814 STILQ15468 1287 aa13.54□□□□□ -0.24
TNFRSF8-203ENST00000417814 BOLA3Q53S33 107 aa13.54□□□□□ -0.24
TNFRSF8-203ENST00000417814 ILDR2Q71H61 639 aa13.54□□□□□ -0.24
TNFRSF8-203ENST00000417814 ARHGAP22Q7Z5H3 698 aa13.54□□□□□ -0.24
TNFRSF8-203ENST00000417814 RPL10LQ96L21 214 aaKnown RBP13.54□□□□□ -0.24
TNFRSF8-203ENST00000417814 KCTD15Q96SI1 283 aaPredicted RBP13.54□□□□□ -0.24
TNFRSF8-203ENST00000417814 KCNK16Q96T55 309 aa13.54□□□□□ -0.24
TNFRSF8-203ENST00000417814 PRPF18Q99633 342 aaKnown RBP13.54□□□□□ -0.24
TNFRSF8-203ENST00000417814 GPR20Q99678 358 aa13.54□□□□□ -0.24
TNFRSF8-203ENST00000417814 LIN28AQ9H9Z2 209 aaKnown RBP13.54□□□□□ -0.24
TNFRSF8-203ENST00000417814 DDIT4Q9NX09 232 aa13.54□□□□□ -0.24
TNFRSF8-203ENST00000417814 SOX13Q9UN79 622 aa13.54□□□□□ -0.24
TNFRSF8-203ENST00000417814 SUPT3HO75486 399 aa13.54□□□□□ -0.24
TNFRSF8-203ENST00000417814 LMNAP02545 664 aaKnown RBP13.54□□□□□ -0.24
TNFRSF8-203ENST00000417814 HMBSP08397 361 aa13.54□□□□□ -0.24
TNFRSF8-203ENST00000417814 CDC16Q13042 620 aa13.54□□□□□ -0.24
TNFRSF8-203ENST00000417814 R3HDM1Q15032 1099 aaKnown RBP13.54□□□□□ -0.24
TNFRSF8-203ENST00000417814 ZPBP2Q6X784 338 aa13.54□□□□□ -0.24
TNFRSF8-203ENST00000417814 OTOP3Q7RTS5 596 aa13.54□□□□□ -0.24
TNFRSF8-203ENST00000417814 AMIGO2Q86SJ2 522 aa13.54□□□□□ -0.24
TNFRSF8-203ENST00000417814 PTCD3Q96EY7 689 aaKnown RBP13.54□□□□□ -0.24
TNFRSF8-203ENST00000417814 ZMAT2Q96NC0 199 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms