RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 DHRS13Q6UX07 377 aa18.79■□□□□ 0.6
VCP-202ENST00000417448 METTL3Q86U44 580 aaKnown RBP18.79■□□□□ 0.6
VCP-202ENST00000417448 CADM4Q8NFZ8 388 aa18.79■□□□□ 0.6
VCP-202ENST00000417448 SCAMP5Q8TAC9 235 aa18.79■□□□□ 0.6
VCP-202ENST00000417448 FAXDC2Q96IV6 333 aa18.79■□□□□ 0.6
VCP-202ENST00000417448 HNRNPABQ99729 332 aaKnown RBP18.79■□□□□ 0.6
VCP-202ENST00000417448 ZSWIM1Q9BR11 485 aa18.79■□□□□ 0.6
VCP-202ENST00000417448 ITM2CQ9NQX7 267 aa18.79■□□□□ 0.6
VCP-202ENST00000417448 CHORDC1Q9UHD1 332 aaPredicted RBP18.79■□□□□ 0.6
VCP-202ENST00000417448 EIF2B4Q9UI10 523 aaKnown RBP18.79■□□□□ 0.6
VCP-202ENST00000417448 DNAJC12Q9UKB3 198 aa18.79■□□□□ 0.6
VCP-202ENST00000417448 GTPBP10A4D1E9 387 aaKnown RBP18.78■□□□□ 0.6
VCP-202ENST00000417448 METTL12A8MUP2 240 aa18.78■□□□□ 0.6
VCP-202ENST00000417448 TEX33O43247 280 aa18.78■□□□□ 0.6
VCP-202ENST00000417448 TYRP14679 529 aa18.78■□□□□ 0.6
VCP-202ENST00000417448 BRD2P25440 801 aaKnown RBP18.78■□□□□ 0.6
VCP-202ENST00000417448 YWHAQP27348 245 aa18.78■□□□□ 0.6
VCP-202ENST00000417448 EIF2S3P41091 472 aaKnown RBP18.78■□□□□ 0.6
VCP-202ENST00000417448 TPMTP51580 245 aa18.78■□□□□ 0.6
VCP-202ENST00000417448 YWHAEP62258 255 aaKnown RBP18.78■□□□□ 0.6
VCP-202ENST00000417448 GCNT1Q02742 428 aa18.78■□□□□ 0.6
VCP-202ENST00000417448 GOLGA7BQ2TAP0 167 aa18.78■□□□□ 0.6
VCP-202ENST00000417448 HECTD3Q5T447 861 aa18.78■□□□□ 0.6
VCP-202ENST00000417448 GPRIN1Q7Z2K8 1008 aa18.78■□□□□ 0.6
VCP-202ENST00000417448 UBA3Q8TBC4 463 aa18.78■□□□□ 0.6
VCP-202ENST00000417448 FBXO32Q969P5 355 aa18.78■□□□□ 0.6
VCP-202ENST00000417448 P2RY11Q96G91 374 aa18.78■□□□□ 0.6
VCP-202ENST00000417448 FCRL3Q96P31 734 aaPredicted RBP18.78■□□□□ 0.6
VCP-202ENST00000417448 GMIPQ9P107 970 aa18.78■□□□□ 0.6
VCP-202ENST00000417448 APEX2Q9UBZ4 518 aa18.78■□□□□ 0.6
VCP-202ENST00000417448 FHOD1Q9Y613 1164 aa18.78■□□□□ 0.6
VCP-202ENST00000417448 ATP8B3O60423 1300 aa18.77■□□□□ 0.6
VCP-202ENST00000417448 TULP2O00295 520 aa18.77■□□□□ 0.6
VCP-202ENST00000417448 EPHB6O15197 1021 aa18.77■□□□□ 0.6
VCP-202ENST00000417448 TNFSF14O43557 240 aa18.77■□□□□ 0.6
VCP-202ENST00000417448 CISD3P0C7P0 127 aa18.77■□□□□ 0.6
VCP-202ENST00000417448 FAM200BP0CF97 657 aa18.77■□□□□ 0.6
VCP-202ENST00000417448 HLA-EP13747 358 aa18.77■□□□□ 0.6
VCP-202ENST00000417448 CSNK1EP49674 416 aaKnown RBP18.77■□□□□ 0.6
VCP-202ENST00000417448 PGFP49763 221 aa18.77■□□□□ 0.6
VCP-202ENST00000417448 MFAP3P55082 362 aa18.77■□□□□ 0.6
VCP-202ENST00000417448 CLDN6P56747 220 aa18.77■□□□□ 0.6
VCP-202ENST00000417448 UBXN1Q04323 297 aa18.77■□□□□ 0.6
VCP-202ENST00000417448 KIF19Q2TAC6 998 aa18.77■□□□□ 0.6
VCP-202ENST00000417448 KLHDC7AQ5VTJ3 777 aa18.77■□□□□ 0.6
VCP-202ENST00000417448 SNX30Q5VWJ9 437 aa18.77■□□□□ 0.6
VCP-202ENST00000417448 CLEC20AQ6ZU45 233 aa18.77■□□□□ 0.6
VCP-202ENST00000417448 NUP93Q8N1F7 819 aa18.77■□□□□ 0.6
VCP-202ENST00000417448 LSM14AQ8ND56 463 aaKnown RBP18.77■□□□□ 0.6
VCP-202ENST00000417448 SMARCD1Q96GM5 515 aa18.77■□□□□ 0.6
VCP-202ENST00000417448 NAP1L5Q96NT1 182 aaPredicted RBP18.77■□□□□ 0.6
VCP-202ENST00000417448 BBS2Q9BXC9 721 aa18.77■□□□□ 0.6
VCP-202ENST00000417448 STON1Q9Y6Q2 735 aa18.77■□□□□ 0.6
VCP-202ENST00000417448 COL6A6A6NMZ7 2263 aa18.77■□□□□ 0.6
VCP-202ENST00000417448 FAM170AA1A519 330 aa18.76■□□□□ 0.59
VCP-202ENST00000417448 E9PAM4 449 aa18.76■□□□□ 0.59
VCP-202ENST00000417448 FOXN3O00409 490 aaPredicted RBP18.76■□□□□ 0.59
VCP-202ENST00000417448 GFRA2O00451 464 aa18.76■□□□□ 0.59
VCP-202ENST00000417448 TPM2P07951 284 aa18.76■□□□□ 0.59
VCP-202ENST00000417448 RAPGEF1Q13905 1077 aa18.76■□□□□ 0.59
VCP-202ENST00000417448 SYCP1Q15431 976 aa18.76■□□□□ 0.59
VCP-202ENST00000417448 SGO2Q562F6 1265 aa18.76■□□□□ 0.59
VCP-202ENST00000417448 TPGS1Q6ZTW0 290 aa18.76■□□□□ 0.59
VCP-202ENST00000417448 TTC39CQ8N584 583 aa18.76■□□□□ 0.59
VCP-202ENST00000417448 PDZD8Q8NEN9 1154 aa18.76■□□□□ 0.59
VCP-202ENST00000417448 ANKRD20A12PQ8NF67 263 aa18.76■□□□□ 0.59
VCP-202ENST00000417448 OVCA2Q8WZ82 227 aa18.76■□□□□ 0.59
VCP-202ENST00000417448 PCMTD1Q96MG8 357 aaPredicted RBP18.76■□□□□ 0.59
VCP-202ENST00000417448 TSPY26PQ9H489 355 aa18.76■□□□□ 0.59
VCP-202ENST00000417448 DMAP1Q9NPF5 467 aaPredicted RBP18.76■□□□□ 0.59
VCP-202ENST00000417448 FAM207AQ9NSI2 230 aaPredicted RBP18.76■□□□□ 0.59
VCP-202ENST00000417448 MARK1Q9P0L2 795 aa18.76■□□□□ 0.59
VCP-202ENST00000417448 SNX11Q9Y5W9 270 aa18.76■□□□□ 0.59
VCP-202ENST00000417448 COL5A1P20908 1838 aaPredicted RBP18.75■□□□□ 0.59
VCP-202ENST00000417448 LGALS16A8MUM7 142 aa18.75■□□□□ 0.59
VCP-202ENST00000417448 HHLA1C9JL84 531 aa18.75■□□□□ 0.59
VCP-202ENST00000417448 ZDHHC11BP0C7U3 371 aa18.75■□□□□ 0.59
VCP-202ENST00000417448 TUBP50607 506 aa18.75■□□□□ 0.59
VCP-202ENST00000417448 ZNF132P52740 706 aa18.75■□□□□ 0.59
VCP-202ENST00000417448 FKBP15Q5T1M5 1219 aa18.75■□□□□ 0.59
VCP-202ENST00000417448 ARHGAP17Q68EM7 881 aa18.75■□□□□ 0.59
VCP-202ENST00000417448 HTR3DQ70Z44 454 aa18.75■□□□□ 0.59
VCP-202ENST00000417448 RNF214Q8ND24 703 aa18.75■□□□□ 0.59
VCP-202ENST00000417448 NXPE2Q96DL1 559 aa18.75■□□□□ 0.59
VCP-202ENST00000417448 XPO6Q96QU8 1125 aaKnown RBP18.75■□□□□ 0.59
VCP-202ENST00000417448 DUSP16Q9BY84 665 aa18.75■□□□□ 0.59
VCP-202ENST00000417448 TSPAN16Q9UKR8 245 aa18.75■□□□□ 0.59
VCP-202ENST00000417448 SIK3Q9Y2K2 1263 aa18.75■□□□□ 0.59
VCP-202ENST00000417448 LRRC10BA6NIK2 292 aa18.74■□□□□ 0.59
VCP-202ENST00000417448 J3QKU1 62 aa18.74■□□□□ 0.59
VCP-202ENST00000417448 O00370 1275 aa18.74■□□□□ 0.59
VCP-202ENST00000417448 KCNK3O14649 394 aa18.74■□□□□ 0.59
VCP-202ENST00000417448 CYP26A1O43174 497 aa18.74■□□□□ 0.59
VCP-202ENST00000417448 RTN3O95197 1032 aaPredicted RBP18.74■□□□□ 0.59
VCP-202ENST00000417448 IGLV3-19P01714 112 aa18.74■□□□□ 0.59
VCP-202ENST00000417448 VDRP11473 427 aa18.74■□□□□ 0.59
VCP-202ENST00000417448 TRIM21P19474 475 aaKnown RBP18.74■□□□□ 0.59
VCP-202ENST00000417448 IL12RB1P42701 662 aa18.74■□□□□ 0.59
VCP-202ENST00000417448 GRK6P43250 576 aa18.74■□□□□ 0.59
VCP-202ENST00000417448 DGKGP49619 791 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms