RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 IGLV3-19P01714 112 aa18.25■□□□□ 0.51
PDLIM2-208ENST00000416159 PON1P27169 355 aa18.25■□□□□ 0.51
PDLIM2-208ENST00000416159 CD70P32970 193 aa18.25■□□□□ 0.51
PDLIM2-208ENST00000416159 PTPRNQ16849 979 aa18.25■□□□□ 0.51
PDLIM2-208ENST00000416159 SYPL2Q5VXT5 272 aa18.25■□□□□ 0.51
PDLIM2-208ENST00000416159 TAC4Q86UU9 113 aa18.25■□□□□ 0.51
PDLIM2-208ENST00000416159 CCDC117Q8IWD4 279 aaPredicted RBP18.25■□□□□ 0.51
PDLIM2-208ENST00000416159 FAM114A1Q8IWE2 563 aa18.25■□□□□ 0.51
PDLIM2-208ENST00000416159 WFDC5Q8TCV5 224 aa18.25■□□□□ 0.51
PDLIM2-208ENST00000416159 DNASE2BQ8WZ79 361 aa18.25■□□□□ 0.51
PDLIM2-208ENST00000416159 SHC3Q92529 594 aa18.25■□□□□ 0.51
PDLIM2-208ENST00000416159 GTPBP2Q9BX10 602 aaKnown RBP18.25■□□□□ 0.51
PDLIM2-208ENST00000416159 CLSTN2Q9H4D0 955 aa18.25■□□□□ 0.51
PDLIM2-208ENST00000416159 ACP6Q9NPH0 428 aa18.25■□□□□ 0.51
PDLIM2-208ENST00000416159 ADAMTS9Q9P2N4 1935 aa18.25■□□□□ 0.51
PDLIM2-208ENST00000416159 MEI4A8MW99 385 aa18.24■□□□□ 0.51
PDLIM2-208ENST00000416159 UPK3BL1B0FP48 263 aa18.24■□□□□ 0.51
PDLIM2-208ENST00000416159 UPK3BL2E5RIL1 263 aa18.24■□□□□ 0.51
PDLIM2-208ENST00000416159 OPHN1O60890 802 aa18.24■□□□□ 0.51
PDLIM2-208ENST00000416159 APOEP02649 317 aa18.24■□□□□ 0.51
PDLIM2-208ENST00000416159 C7P10643 843 aa18.24■□□□□ 0.51
PDLIM2-208ENST00000416159 YWHAZP63104 245 aaKnown RBP18.24■□□□□ 0.51
PDLIM2-208ENST00000416159 PTK2Q05397 1052 aa18.24■□□□□ 0.51
PDLIM2-208ENST00000416159 ZNF252P-AS1Q0IIN9 211 aa18.24■□□□□ 0.51
PDLIM2-208ENST00000416159 PDCLQ13371 301 aa18.24■□□□□ 0.51
PDLIM2-208ENST00000416159 MAN2A1Q16706 1144 aa18.24■□□□□ 0.51
PDLIM2-208ENST00000416159 PLEKHG6Q3KR16 790 aa18.24■□□□□ 0.51
PDLIM2-208ENST00000416159 MS4A13Q5J8X5 152 aa18.24■□□□□ 0.51
PDLIM2-208ENST00000416159 ADAM32Q8TC27 787 aa18.24■□□□□ 0.51
PDLIM2-208ENST00000416159 TTC17Q96AE7 1141 aa18.24■□□□□ 0.51
PDLIM2-208ENST00000416159 LMLNQ96KR4 655 aa18.24■□□□□ 0.51
PDLIM2-208ENST00000416159 NUCKS1Q9H1E3 243 aaKnown RBP18.24■□□□□ 0.51
PDLIM2-208ENST00000416159 LHX5Q9H2C1 402 aa18.24■□□□□ 0.51
PDLIM2-208ENST00000416159 FSCN3Q9NQT6 498 aa18.24■□□□□ 0.51
PDLIM2-208ENST00000416159 PCDHGC3Q9UN70 934 aa18.24■□□□□ 0.51
PDLIM2-208ENST00000416159 CACNA1EQ15878 2313 aa18.24■□□□□ 0.51
PDLIM2-208ENST00000416159 METTL12A8MUP2 240 aa18.23■□□□□ 0.51
PDLIM2-208ENST00000416159 TRUB2O95900 331 aaKnown RBP18.23■□□□□ 0.51
PDLIM2-208ENST00000416159 MOCS2O96007 188 aaPredicted RBP18.23■□□□□ 0.51
PDLIM2-208ENST00000416159 ASLP04424 464 aa18.23■□□□□ 0.51
PDLIM2-208ENST00000416159 GLI1P08151 1106 aa18.23■□□□□ 0.51
PDLIM2-208ENST00000416159 MAOBP27338 520 aa18.23■□□□□ 0.51
PDLIM2-208ENST00000416159 RPS24P62847 133 aaKnown RBP18.23■□□□□ 0.51
PDLIM2-208ENST00000416159 SEMA3BQ13214 749 aa18.23■□□□□ 0.51
PDLIM2-208ENST00000416159 CARNMT1Q8N4J0 409 aa18.23■□□□□ 0.51
PDLIM2-208ENST00000416159 MINDY1Q8N5J2 469 aa18.23■□□□□ 0.51
PDLIM2-208ENST00000416159 ATP6V0D2Q8N8Y2 350 aa18.23■□□□□ 0.51
PDLIM2-208ENST00000416159 DEFB124Q8NES8 71 aa18.23■□□□□ 0.51
PDLIM2-208ENST00000416159 PRICKLE1Q96MT3 831 aaPredicted RBP18.23■□□□□ 0.51
PDLIM2-208ENST00000416159 PCED1AQ9H1Q7 454 aa18.23■□□□□ 0.51
PDLIM2-208ENST00000416159 PRSS16Q9NQE7 514 aa18.23■□□□□ 0.51
PDLIM2-208ENST00000416159 ASNSD1Q9NWL6 643 aa18.23■□□□□ 0.51
PDLIM2-208ENST00000416159 SLC12A6Q9UHW9 1150 aa18.23■□□□□ 0.51
PDLIM2-208ENST00000416159 DACH1Q9UI36 760 aa18.23■□□□□ 0.51
PDLIM2-208ENST00000416159 PCDH15Q96QU1 1955 aa18.22■□□□□ 0.51
PDLIM2-208ENST00000416159 A0A1B0GTW7 788 aa18.22■□□□□ 0.51
PDLIM2-208ENST00000416159 IGLV3-25P01717 112 aa18.22■□□□□ 0.51
PDLIM2-208ENST00000416159 PRKCSHP14314 528 aaPredicted RBP18.22■□□□□ 0.51
PDLIM2-208ENST00000416159 ERCC5P28715 1186 aaPredicted RBP18.22■□□□□ 0.51
PDLIM2-208ENST00000416159 SNX16P57768 344 aa18.22■□□□□ 0.51
PDLIM2-208ENST00000416159 ST8SIA6P61647 398 aa18.22■□□□□ 0.51
PDLIM2-208ENST00000416159 CDK17Q00537 523 aa18.22■□□□□ 0.51
PDLIM2-208ENST00000416159 APBA1Q02410 837 aa18.22■□□□□ 0.51
PDLIM2-208ENST00000416159 ZBTB16Q05516 673 aa18.22■□□□□ 0.51
PDLIM2-208ENST00000416159 CDH18Q13634 790 aa18.22■□□□□ 0.51
PDLIM2-208ENST00000416159 DCAF6Q58WW2 860 aa18.22■□□□□ 0.51
PDLIM2-208ENST00000416159 ZC3H12AQ5D1E8 599 aaKnown RBP18.22■□□□□ 0.51
PDLIM2-208ENST00000416159 EFHC1Q5JVL4 640 aa18.22■□□□□ 0.51
PDLIM2-208ENST00000416159 DCAF12L1Q5VU92 463 aa18.22■□□□□ 0.51
PDLIM2-208ENST00000416159 CACUL1Q86Y37 369 aa18.22■□□□□ 0.51
PDLIM2-208ENST00000416159 LGI2Q8N0V4 545 aa18.22■□□□□ 0.51
PDLIM2-208ENST00000416159 WDTC1Q8N5D0 677 aa18.22■□□□□ 0.51
PDLIM2-208ENST00000416159 ZNF366Q8N895 744 aa18.22■□□□□ 0.51
PDLIM2-208ENST00000416159 MYEOVQ96EZ4 313 aa18.22■□□□□ 0.51
PDLIM2-208ENST00000416159 PPP1R13BQ96KQ4 1090 aa18.22■□□□□ 0.51
PDLIM2-208ENST00000416159 BTN2A3PQ96KV6 586 aa18.22■□□□□ 0.51
PDLIM2-208ENST00000416159 NOX5Q96PH1 765 aa18.22■□□□□ 0.51
PDLIM2-208ENST00000416159 ZDHHC5Q9C0B5 715 aa18.22■□□□□ 0.51
PDLIM2-208ENST00000416159 SIX2Q9NPC8 291 aa18.22■□□□□ 0.51
PDLIM2-208ENST00000416159 DNAAF2Q9NVR5 837 aaKnown RBP18.22■□□□□ 0.51
PDLIM2-208ENST00000416159 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.22■□□□□ 0.51
PDLIM2-208ENST00000416159 TJP2Q9UDY2 1190 aa18.22■□□□□ 0.51
PDLIM2-208ENST00000416159 DNAJC12Q9UKB3 198 aa18.22■□□□□ 0.51
PDLIM2-208ENST00000416159 LUC7L3O95232 432 aaKnown RBP18.21■□□□□ 0.51
PDLIM2-208ENST00000416159 MOCS3O95396 460 aa18.21■□□□□ 0.51
PDLIM2-208ENST00000416159 SLC2A3P11169 496 aa18.21■□□□□ 0.51
PDLIM2-208ENST00000416159 TACR2P21452 398 aa18.21■□□□□ 0.51
PDLIM2-208ENST00000416159 KRT9P35527 623 aa18.21■□□□□ 0.51
PDLIM2-208ENST00000416159 EIF4EBP2Q13542 120 aaPredicted RBP18.21■□□□□ 0.51
PDLIM2-208ENST00000416159 PIP4P1Q86T03 277 aa18.21■□□□□ 0.51
PDLIM2-208ENST00000416159 FAM124AQ86V42 546 aa18.21■□□□□ 0.51
PDLIM2-208ENST00000416159 CHSY1Q86X52 802 aa18.21■□□□□ 0.51
PDLIM2-208ENST00000416159 DEFB106AQ8N104 65 aa18.21■□□□□ 0.51
PDLIM2-208ENST00000416159 KDM1BQ8NB78 822 aa18.21■□□□□ 0.51
PDLIM2-208ENST00000416159 CPXM1Q96SM3 734 aa18.21■□□□□ 0.51
PDLIM2-208ENST00000416159 MIR1-1HGQ9H1L0 117 aa18.21■□□□□ 0.51
PDLIM2-208ENST00000416159 KIAA1522Q9P206 1035 aaPredicted RBP18.21■□□□□ 0.51
PDLIM2-208ENST00000416159 XPO7Q9UIA9 1087 aaKnown RBP18.21■□□□□ 0.51
PDLIM2-208ENST00000416159 INTS6Q9UL03 887 aaKnown RBP18.21■□□□□ 0.51
PDLIM2-208ENST00000416159 NUMA1Q14980 2115 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms