RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 HSPA9P38646 679 aaKnown RBP15.03■□□□□ -0
SGCE-202ENST00000415788 HARS2P49590 506 aaKnown RBP15.03■□□□□ -0
SGCE-202ENST00000415788 PITX1P78337 314 aaPredicted RBP15.03■□□□□ -0
SGCE-202ENST00000415788 ATP11AP98196 1134 aa15.03■□□□□ -0
SGCE-202ENST00000415788 OGDHQ02218 1023 aa15.03■□□□□ -0
SGCE-202ENST00000415788 USP4Q13107 963 aa15.03■□□□□ -0
SGCE-202ENST00000415788 NME3Q13232 169 aa15.03■□□□□ -0
SGCE-202ENST00000415788 IFI16Q16666 785 aaKnown RBP15.03■□□□□ -0
SGCE-202ENST00000415788 OTUD1Q5VV17 481 aaPredicted RBP15.03■□□□□ -0
SGCE-202ENST00000415788 TTC19Q6DKK2 380 aaPredicted RBP15.03■□□□□ -0
SGCE-202ENST00000415788 UNC45BQ8IWX7 931 aa15.03■□□□□ -0
SGCE-202ENST00000415788 ADAM32Q8TC27 787 aa15.03■□□□□ -0
SGCE-202ENST00000415788 SH3RF2Q8TEC5 729 aa15.03■□□□□ -0
SGCE-202ENST00000415788 ELSPBP1Q96BH3 223 aa15.03■□□□□ -0
SGCE-202ENST00000415788 DCLK3Q9C098 648 aa15.03■□□□□ -0
SGCE-202ENST00000415788 SMG9Q9H0W8 520 aaKnown RBP15.03■□□□□ -0
SGCE-202ENST00000415788 EPB41L5Q9HCM4 733 aa15.03■□□□□ -0
SGCE-202ENST00000415788 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.03■□□□□ -0
SGCE-202ENST00000415788 SH3BP1Q9Y3L3 701 aa15.03■□□□□ -0
SGCE-202ENST00000415788 E2F8A0AVK6 867 aa15.03■□□□□ -0
SGCE-202ENST00000415788 ANHXE9PGG2 379 aa15.03■□□□□ -0
SGCE-202ENST00000415788 STC2O76061 302 aa15.03■□□□□ -0
SGCE-202ENST00000415788 KRT14P02533 472 aa15.03■□□□□ -0
SGCE-202ENST00000415788 APOEP02649 317 aa15.03■□□□□ -0
SGCE-202ENST00000415788 FCARP24071 287 aa15.03■□□□□ -0
SGCE-202ENST00000415788 MAN1A1P33908 653 aa15.03■□□□□ -0
SGCE-202ENST00000415788 CARSP49589 748 aaKnown RBP15.03■□□□□ -0
SGCE-202ENST00000415788 ATP1A2P50993 1020 aa15.03■□□□□ -0
SGCE-202ENST00000415788 KCNQ1P51787 676 aa15.03■□□□□ -0
SGCE-202ENST00000415788 PPP2R5DQ14738 602 aa15.03■□□□□ -0
SGCE-202ENST00000415788 ZNF77Q15935 545 aa15.03■□□□□ -0
SGCE-202ENST00000415788 CDO1Q16878 200 aa15.03■□□□□ -0
SGCE-202ENST00000415788 C15orf59Q2T9L4 293 aaPredicted RBP15.03■□□□□ -0
SGCE-202ENST00000415788 BRMS1LQ5PSV4 323 aa15.03■□□□□ -0
SGCE-202ENST00000415788 CCDC50Q8IVM0 306 aa15.03■□□□□ -0
SGCE-202ENST00000415788 ADHFE1Q8IWW8 467 aa15.03■□□□□ -0
SGCE-202ENST00000415788 SH2D3CQ8N5H7 860 aa15.03■□□□□ -0
SGCE-202ENST00000415788 GPATCH11Q8N954 259 aa15.03■□□□□ -0
SGCE-202ENST00000415788 FAM172AQ8WUF8 416 aa15.03■□□□□ -0
SGCE-202ENST00000415788 SLC39A13Q96H72 371 aa15.03■□□□□ -0
SGCE-202ENST00000415788 DOCK6Q96HP0 2047 aa15.03■□□□□ -0
SGCE-202ENST00000415788 CCT8L2Q96SF2 557 aa15.03■□□□□ -0
SGCE-202ENST00000415788 TRIM7Q9C029 511 aa15.03■□□□□ -0
SGCE-202ENST00000415788 RABEP2Q9H5N1 569 aa15.03■□□□□ -0
SGCE-202ENST00000415788 GKN1Q9NS71 199 aa15.03■□□□□ -0
SGCE-202ENST00000415788 CFAP97Q9P2B7 532 aa15.03■□□□□ -0
SGCE-202ENST00000415788 LSM7Q9UK45 103 aaKnown RBP15.03■□□□□ -0
SGCE-202ENST00000415788 NFU1Q9UMS0 254 aa15.03■□□□□ -0
SGCE-202ENST00000415788 CCL26Q9Y258 94 aa15.03■□□□□ -0
SGCE-202ENST00000415788 ZNF510Q9Y2H8 683 aa15.03■□□□□ -0
SGCE-202ENST00000415788 ANAPC1Q9H1A4 1944 aa15.03■□□□□ -0
SGCE-202ENST00000415788 GOLGA6L7A0A1B0GV03 622 aa15.02■□□□□ -0
SGCE-202ENST00000415788 KIF1CO43896 1103 aaKnown RBP15.02■□□□□ -0
SGCE-202ENST00000415788 LATS1O95835 1130 aa15.02■□□□□ -0
SGCE-202ENST00000415788 SP100P23497 879 aaPredicted RBP15.02■□□□□ -0
SGCE-202ENST00000415788 CXCR5P32302 372 aa15.02■□□□□ -0
SGCE-202ENST00000415788 CXCR3P49682 368 aa15.02■□□□□ -0
SGCE-202ENST00000415788 ZXDBP98169 803 aa15.02■□□□□ -0
SGCE-202ENST00000415788 GUCY2DQ02846 1103 aa15.02■□□□□ -0
SGCE-202ENST00000415788 ZNF252P-AS1Q0IIN9 211 aa15.02■□□□□ -0
SGCE-202ENST00000415788 HTR4Q13639 388 aa15.02■□□□□ -0
SGCE-202ENST00000415788 TAX1BP1Q86VP1 789 aa15.02■□□□□ -0
SGCE-202ENST00000415788 BPIFB1Q8TDL5 484 aa15.02■□□□□ -0
SGCE-202ENST00000415788 DEPDC1BQ8WUY9 529 aa15.02■□□□□ -0
SGCE-202ENST00000415788 RNF34Q969K3 372 aa15.02■□□□□ -0
SGCE-202ENST00000415788 FCRL2Q96LA5 508 aaPredicted RBP15.02■□□□□ -0
SGCE-202ENST00000415788 ASB2Q96Q27 587 aa15.02■□□□□ -0
SGCE-202ENST00000415788 WDCPQ9H6R7 721 aa15.02■□□□□ -0
SGCE-202ENST00000415788 TMBIM4Q9HC24 238 aa15.02■□□□□ -0
SGCE-202ENST00000415788 PIGVQ9NUD9 493 aa15.02■□□□□ -0
SGCE-202ENST00000415788 IGSF9Q9P2J2 1179 aa15.02■□□□□ -0
SGCE-202ENST00000415788 SLC12A6Q9UHW9 1150 aa15.02■□□□□ -0
SGCE-202ENST00000415788 DENND4CQ5VZ89 1909 aa15.02■□□□□ -0
SGCE-202ENST00000415788 SYNJ2BP-COX16A0A087WUM0 186 aa15.01□□□□□ -0.01
SGCE-202ENST00000415788 HEPACAM2A8MVW5 462 aa15.01□□□□□ -0.01
SGCE-202ENST00000415788 LOC730098B7Z3J9 87 aa15.01□□□□□ -0.01
SGCE-202ENST00000415788 PROSCO94903 275 aa15.01□□□□□ -0.01
SGCE-202ENST00000415788 TFE3P19532 575 aaPredicted RBP15.01□□□□□ -0.01
SGCE-202ENST00000415788 PCK1P35558 622 aa15.01□□□□□ -0.01
SGCE-202ENST00000415788 VIPR2P41587 438 aa15.01□□□□□ -0.01
SGCE-202ENST00000415788 AIF1P55008 147 aa15.01□□□□□ -0.01
SGCE-202ENST00000415788 HDAC4P56524 1084 aa15.01□□□□□ -0.01
SGCE-202ENST00000415788 ACBD5Q5T8D3 534 aaPredicted RBP15.01□□□□□ -0.01
SGCE-202ENST00000415788 KCTD16Q68DU8 428 aa15.01□□□□□ -0.01
SGCE-202ENST00000415788 PARM1Q6UWI2 310 aa15.01□□□□□ -0.01
SGCE-202ENST00000415788 C6orf89Q6UWU4 347 aa15.01□□□□□ -0.01
SGCE-202ENST00000415788 HTR3DQ70Z44 454 aa15.01□□□□□ -0.01
SGCE-202ENST00000415788 ADAMTS19Q8TE59 1207 aa15.01□□□□□ -0.01
SGCE-202ENST00000415788 AZIN2Q96A70 460 aa15.01□□□□□ -0.01
SGCE-202ENST00000415788 HINFPQ9BQA5 517 aa15.01□□□□□ -0.01
SGCE-202ENST00000415788 ADAM33Q9BZ11 813 aa15.01□□□□□ -0.01
SGCE-202ENST00000415788 THG1LQ9NWX6 298 aaKnown RBP15.01□□□□□ -0.01
SGCE-202ENST00000415788 COX16Q9P0S2 106 aa15.01□□□□□ -0.01
SGCE-202ENST00000415788 TBC1D14Q9P2M4 693 aa15.01□□□□□ -0.01
SGCE-202ENST00000415788 SLC9A3R1O14745 358 aaPredicted RBP15.01□□□□□ -0.01
SGCE-202ENST00000415788 HMBSP08397 361 aa15.01□□□□□ -0.01
SGCE-202ENST00000415788 IRF1P10914 325 aa15.01□□□□□ -0.01
SGCE-202ENST00000415788 SLC1A1P43005 524 aa15.01□□□□□ -0.01
SGCE-202ENST00000415788 SLC11A2P49281 568 aa15.01□□□□□ -0.01
SGCE-202ENST00000415788 GUCY1A3Q02108 690 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms