RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 KLF1Q13351 362 aaPredicted RBP16.05■□□□□ 0.16
SHMT2-202ENST00000414700 ADGRE1Q14246 886 aa16.05■□□□□ 0.16
SHMT2-202ENST00000414700 SIX1Q15475 284 aaPredicted RBP16.05■□□□□ 0.16
SHMT2-202ENST00000414700 TRIP4Q15650 581 aaPredicted RBP16.05■□□□□ 0.16
SHMT2-202ENST00000414700 TAZQ16635 292 aa16.05■□□□□ 0.16
SHMT2-202ENST00000414700 MICALCLQ6ZW33 695 aa16.05■□□□□ 0.16
SHMT2-202ENST00000414700 OTUD6BQ8N6M0 293 aa16.05■□□□□ 0.16
SHMT2-202ENST00000414700 SPATA4Q8NEY3 305 aa16.05■□□□□ 0.16
SHMT2-202ENST00000414700 ZFRQ96KR1 1074 aaKnown RBP16.05■□□□□ 0.16
SHMT2-202ENST00000414700 FAM118BQ9BPY3 351 aa16.05■□□□□ 0.16
SHMT2-202ENST00000414700 SIK2Q9H0K1 926 aa16.05■□□□□ 0.16
SHMT2-202ENST00000414700 RBM12Q9NTZ6 932 aaKnown RBP16.05■□□□□ 0.16
SHMT2-202ENST00000414700 NUP205Q92621 2012 aa16.04■□□□□ 0.16
SHMT2-202ENST00000414700 SCAMP3O14828 347 aaKnown RBP16.04■□□□□ 0.16
SHMT2-202ENST00000414700 CHUKO15111 745 aa16.04■□□□□ 0.16
SHMT2-202ENST00000414700 CREB3O43889 395 aa16.04■□□□□ 0.16
SHMT2-202ENST00000414700 DYNLT1P63172 113 aa16.04■□□□□ 0.16
SHMT2-202ENST00000414700 PPP2R5DQ14738 602 aa16.04■□□□□ 0.16
SHMT2-202ENST00000414700 EFHC2Q5JST6 749 aa16.04■□□□□ 0.16
SHMT2-202ENST00000414700 BRMS1LQ5PSV4 323 aa16.04■□□□□ 0.16
SHMT2-202ENST00000414700 KLHDC10Q6PID8 442 aa16.04■□□□□ 0.16
SHMT2-202ENST00000414700 PDZD4Q76G19 769 aaPredicted RBP16.04■□□□□ 0.16
SHMT2-202ENST00000414700 MRPS31Q92665 395 aaKnown RBP16.04■□□□□ 0.16
SHMT2-202ENST00000414700 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.04■□□□□ 0.16
SHMT2-202ENST00000414700 SAE1Q9UBE0 346 aaPredicted RBP16.04■□□□□ 0.16
SHMT2-202ENST00000414700 RNF14Q9UBS8 474 aa16.04■□□□□ 0.16
SHMT2-202ENST00000414700 OR12D3Q9UGF7 316 aa16.04■□□□□ 0.16
SHMT2-202ENST00000414700 DPP7Q9UHL4 492 aa16.04■□□□□ 0.16
SHMT2-202ENST00000414700 COL6A3P12111 3177 aa16.04■□□□□ 0.16
SHMT2-202ENST00000414700 NDUFAB1O14561 156 aa16.04■□□□□ 0.16
SHMT2-202ENST00000414700 XYLBO75191 536 aa16.04■□□□□ 0.16
SHMT2-202ENST00000414700 OLFM2O95897 454 aa16.04■□□□□ 0.16
SHMT2-202ENST00000414700 HDCP19113 662 aa16.04■□□□□ 0.16
SHMT2-202ENST00000414700 CDC25CP30307 473 aa16.04■□□□□ 0.16
SHMT2-202ENST00000414700 SEMA3BQ13214 749 aa16.04■□□□□ 0.16
SHMT2-202ENST00000414700 NNTQ13423 1086 aa16.04■□□□□ 0.16
SHMT2-202ENST00000414700 PDK2Q15119 407 aa16.04■□□□□ 0.16
SHMT2-202ENST00000414700 TEAD2Q15562 447 aa16.04■□□□□ 0.16
SHMT2-202ENST00000414700 ARL13BQ3SXY8 428 aa16.04■□□□□ 0.16
SHMT2-202ENST00000414700 ARTNQ5T4W7 220 aa16.04■□□□□ 0.16
SHMT2-202ENST00000414700 PIK3R6Q5UE93 754 aa16.04■□□□□ 0.16
SHMT2-202ENST00000414700 PCDH19Q8TAB3 1148 aa16.04■□□□□ 0.16
SHMT2-202ENST00000414700 SMG7Q92540 1137 aaKnown RBP16.04■□□□□ 0.16
SHMT2-202ENST00000414700 HAUS1Q96CS2 278 aa16.04■□□□□ 0.16
SHMT2-202ENST00000414700 CDK5RAP1Q96SZ6 601 aaKnown RBP16.04■□□□□ 0.16
SHMT2-202ENST00000414700 CDCA3Q99618 268 aaPredicted RBP16.04■□□□□ 0.16
SHMT2-202ENST00000414700 SLC46A2Q9BY10 475 aa16.04■□□□□ 0.16
SHMT2-202ENST00000414700 SMG9Q9H0W8 520 aaKnown RBP16.04■□□□□ 0.16
SHMT2-202ENST00000414700 MCM8Q9UJA3 840 aa16.04■□□□□ 0.16
SHMT2-202ENST00000414700 R3HDM2Q9Y2K5 976 aaKnown RBP16.04■□□□□ 0.16
SHMT2-202ENST00000414700 MFHAS1Q9Y4C4 1052 aa16.04■□□□□ 0.16
SHMT2-202ENST00000414700 DOCK4Q8N1I0 1966 aa16.03■□□□□ 0.16
SHMT2-202ENST00000414700 KRIT1O00522 736 aa16.03■□□□□ 0.16
SHMT2-202ENST00000414700 IRF1P10914 325 aa16.03■□□□□ 0.16
SHMT2-202ENST00000414700 MBL2P11226 248 aaPredicted RBP16.03■□□□□ 0.16
SHMT2-202ENST00000414700 AIF1P55008 147 aa16.03■□□□□ 0.16
SHMT2-202ENST00000414700 COPS2P61201 443 aa16.03■□□□□ 0.16
SHMT2-202ENST00000414700 MRPS25P82663 173 aaKnown RBP16.03■□□□□ 0.16
SHMT2-202ENST00000414700 PPP2R5EQ16537 467 aa16.03■□□□□ 0.16
SHMT2-202ENST00000414700 ANKRD20A8PQ5CZ79 823 aa16.03■□□□□ 0.16
SHMT2-202ENST00000414700 PRSS36Q5K4E3 855 aa16.03■□□□□ 0.16
SHMT2-202ENST00000414700 RARS2Q5T160 578 aaKnown RBP16.03■□□□□ 0.16
SHMT2-202ENST00000414700 ZNF572Q7Z3I7 529 aaPredicted RBP16.03■□□□□ 0.16
SHMT2-202ENST00000414700 YTHDF3Q7Z739 585 aaKnown RBP16.03■□□□□ 0.16
SHMT2-202ENST00000414700 PQLC3Q8N755 202 aa16.03■□□□□ 0.16
SHMT2-202ENST00000414700 TTC16Q8NEE8 873 aa16.03■□□□□ 0.16
SHMT2-202ENST00000414700 ATG4AQ8WYN0 398 aa16.03■□□□□ 0.16
SHMT2-202ENST00000414700 PPP2R3CQ969Q6 453 aa16.03■□□□□ 0.16
SHMT2-202ENST00000414700 CSPG4P5Q96PW8 444 aa16.03■□□□□ 0.16
SHMT2-202ENST00000414700 KLF16Q9BXK1 252 aaPredicted RBP16.03■□□□□ 0.16
SHMT2-202ENST00000414700 ETNK2Q9NVF9 386 aa16.03■□□□□ 0.16
SHMT2-202ENST00000414700 HS3ST4Q9Y661 456 aa16.03■□□□□ 0.16
SHMT2-202ENST00000414700 CST8O60676 142 aa16.02■□□□□ 0.16
SHMT2-202ENST00000414700 STC2O76061 302 aa16.02■□□□□ 0.16
SHMT2-202ENST00000414700 LRIG2O94898 1065 aa16.02■□□□□ 0.16
SHMT2-202ENST00000414700 KLKB1P03952 638 aa16.02■□□□□ 0.16
SHMT2-202ENST00000414700 CKMP06732 381 aa16.02■□□□□ 0.16
SHMT2-202ENST00000414700 DLX2Q07687 328 aaPredicted RBP16.02■□□□□ 0.16
SHMT2-202ENST00000414700 CBX2Q14781 532 aaPredicted RBP16.02■□□□□ 0.16
SHMT2-202ENST00000414700 PREPLQ4J6C6 727 aaPredicted RBP16.02■□□□□ 0.16
SHMT2-202ENST00000414700 ALS2CLQ60I27 953 aa16.02■□□□□ 0.16
SHMT2-202ENST00000414700 RFX6Q8HWS3 928 aa16.02■□□□□ 0.16
SHMT2-202ENST00000414700 PSTKQ8IV42 348 aaKnown RBP16.02■□□□□ 0.16
SHMT2-202ENST00000414700 MAP7D3Q8IWC1 876 aa16.02■□□□□ 0.16
SHMT2-202ENST00000414700 PRELID2Q8N945 189 aa16.02■□□□□ 0.16
SHMT2-202ENST00000414700 ADAMTS19Q8TE59 1207 aa16.02■□□□□ 0.16
SHMT2-202ENST00000414700 ING5Q8WYH8 240 aa16.02■□□□□ 0.16
SHMT2-202ENST00000414700 RNF157Q96PX1 679 aa16.02■□□□□ 0.16
SHMT2-202ENST00000414700 GCNAQ96QF7 691 aa16.02■□□□□ 0.16
SHMT2-202ENST00000414700 ZNF670Q9BS34 389 aa16.02■□□□□ 0.16
SHMT2-202ENST00000414700 RABEP2Q9H5N1 569 aa16.02■□□□□ 0.16
SHMT2-202ENST00000414700 SFXN1Q9H9B4 322 aa16.02■□□□□ 0.16
SHMT2-202ENST00000414700 PIDD1Q9HB75 910 aa16.02■□□□□ 0.16
SHMT2-202ENST00000414700 MTCH2Q9Y6C9 303 aa16.02■□□□□ 0.16
SHMT2-202ENST00000414700 HELZP42694 1942 aaKnown RBP16.02■□□□□ 0.16
SHMT2-202ENST00000414700 SRGAP2BP0DMP2 458 aa16.02■□□□□ 0.15
SHMT2-202ENST00000414700 AMPD1P23109 780 aa16.02■□□□□ 0.15
SHMT2-202ENST00000414700 PTPN7P35236 360 aa16.02■□□□□ 0.15
SHMT2-202ENST00000414700 SATB1Q01826 763 aa16.02■□□□□ 0.15
SHMT2-202ENST00000414700 RING1Q06587 406 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms