RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 TYW5A2RUC4 315 aaKnown RBP16.13■□□□□ 0.17
ACTB-202ENST00000414620 SYPP08247 313 aa16.13■□□□□ 0.17
ACTB-202ENST00000414620 GNSP15586 552 aa16.13■□□□□ 0.17
ACTB-202ENST00000414620 POLR2EP19388 210 aaKnown RBP16.13■□□□□ 0.17
ACTB-202ENST00000414620 ACADSBP45954 432 aa16.13■□□□□ 0.17
ACTB-202ENST00000414620 MTIF2P46199 727 aaKnown RBP16.13■□□□□ 0.17
ACTB-202ENST00000414620 RPL34P49207 117 aaKnown RBP16.13■□□□□ 0.17
ACTB-202ENST00000414620 NUMBP49757 651 aa16.13■□□□□ 0.17
ACTB-202ENST00000414620 PITX1P78337 314 aaPredicted RBP16.13■□□□□ 0.17
ACTB-202ENST00000414620 SHC2P98077 582 aa16.13■□□□□ 0.17
ACTB-202ENST00000414620 SEMA3BQ13214 749 aa16.13■□□□□ 0.17
ACTB-202ENST00000414620 CAMK2GQ13555 558 aaPredicted RBP16.13■□□□□ 0.17
ACTB-202ENST00000414620 GBP6Q6ZN66 633 aa16.13■□□□□ 0.17
ACTB-202ENST00000414620 KIAA0907Q7Z7F0 614 aaPredicted RBP16.13■□□□□ 0.17
ACTB-202ENST00000414620 PASD1Q8IV76 773 aa16.13■□□□□ 0.17
ACTB-202ENST00000414620 SNX19Q92543 992 aa16.13■□□□□ 0.17
ACTB-202ENST00000414620 SLC4A5Q9BY07 1137 aa16.13■□□□□ 0.17
ACTB-202ENST00000414620 SLC32A1Q9H598 525 aa16.13■□□□□ 0.17
ACTB-202ENST00000414620 SUSD2Q9UGT4 822 aa16.13■□□□□ 0.17
ACTB-202ENST00000414620 AJAP1Q9UKB5 411 aaPredicted RBP16.13■□□□□ 0.17
ACTB-202ENST00000414620 TLR6Q9Y2C9 796 aa16.13■□□□□ 0.17
ACTB-202ENST00000414620 CACNA1EQ15878 2313 aa16.13■□□□□ 0.17
ACTB-202ENST00000414620 SYNJ2BP-COX16A0A087WUM0 186 aa16.12■□□□□ 0.17
ACTB-202ENST00000414620 IRAK2O43187 625 aa16.12■□□□□ 0.17
ACTB-202ENST00000414620 SART1O43290 800 aaKnown RBP16.12■□□□□ 0.17
ACTB-202ENST00000414620 ATP5BP06576 529 aaKnown RBP16.12■□□□□ 0.17
ACTB-202ENST00000414620 DLDP09622 509 aaKnown RBP16.12■□□□□ 0.17
ACTB-202ENST00000414620 OXTRP30559 389 aa16.12■□□□□ 0.17
ACTB-202ENST00000414620 GRIK2Q13002 908 aa16.12■□□□□ 0.17
ACTB-202ENST00000414620 PDCLQ13371 301 aa16.12■□□□□ 0.17
ACTB-202ENST00000414620 CDH18Q13634 790 aa16.12■□□□□ 0.17
ACTB-202ENST00000414620 TPD52L1Q16890 204 aaPredicted RBP16.12■□□□□ 0.17
ACTB-202ENST00000414620 ZC3H12AQ5D1E8 599 aaKnown RBP16.12■□□□□ 0.17
ACTB-202ENST00000414620 MS4A13Q5J8X5 152 aa16.12■□□□□ 0.17
ACTB-202ENST00000414620 RAP1GAP2Q684P5 730 aa16.12■□□□□ 0.17
ACTB-202ENST00000414620 MMS22LQ6ZRQ5 1243 aa16.12■□□□□ 0.17
ACTB-202ENST00000414620 CHSY1Q86X52 802 aa16.12■□□□□ 0.17
ACTB-202ENST00000414620 LGI2Q8N0V4 545 aa16.12■□□□□ 0.17
ACTB-202ENST00000414620 SLC39A13Q96H72 371 aa16.12■□□□□ 0.17
ACTB-202ENST00000414620 DDX50Q9BQ39 737 aaKnown RBP16.12■□□□□ 0.17
ACTB-202ENST00000414620 NUP58Q9BVL2 599 aa16.12■□□□□ 0.17
ACTB-202ENST00000414620 PRSS16Q9NQE7 514 aa16.12■□□□□ 0.17
ACTB-202ENST00000414620 COX16Q9P0S2 106 aa16.12■□□□□ 0.17
ACTB-202ENST00000414620 APEX2Q9UBZ4 518 aa16.12■□□□□ 0.17
ACTB-202ENST00000414620 A0A1B0GTW7 788 aa16.11■□□□□ 0.17
ACTB-202ENST00000414620 IGLV3-19P01714 112 aa16.11■□□□□ 0.17
ACTB-202ENST00000414620 APOEP02649 317 aa16.11■□□□□ 0.17
ACTB-202ENST00000414620 PNMA6AP0CW24 399 aaPredicted RBP16.11■□□□□ 0.17
ACTB-202ENST00000414620 ACSL1P33121 698 aa16.11■□□□□ 0.17
ACTB-202ENST00000414620 CSKP41240 450 aa16.11■□□□□ 0.17
ACTB-202ENST00000414620 RPS14P62263 151 aaKnown RBP16.11■□□□□ 0.17
ACTB-202ENST00000414620 TAF5Q15542 800 aa16.11■□□□□ 0.17
ACTB-202ENST00000414620 EXOC3L4Q17RC7 722 aa16.11■□□□□ 0.17
ACTB-202ENST00000414620 HSP90AA4PQ58FG1 418 aa16.11■□□□□ 0.17
ACTB-202ENST00000414620 DCAF6Q58WW2 860 aa16.11■□□□□ 0.17
ACTB-202ENST00000414620 FSCBQ5H9T9 825 aa16.11■□□□□ 0.17
ACTB-202ENST00000414620 MPP7Q5T2T1 576 aa16.11■□□□□ 0.17
ACTB-202ENST00000414620 ENOSF1Q7L5Y1 443 aa16.11■□□□□ 0.17
ACTB-202ENST00000414620 PIP4P1Q86T03 277 aa16.11■□□□□ 0.17
ACTB-202ENST00000414620 IRF2BP1Q8IU81 584 aa16.11■□□□□ 0.17
ACTB-202ENST00000414620 DNASE2BQ8WZ79 361 aa16.11■□□□□ 0.17
ACTB-202ENST00000414620 AZIN2Q96A70 460 aa16.11■□□□□ 0.17
ACTB-202ENST00000414620 LMLNQ96KR4 655 aa16.11■□□□□ 0.17
ACTB-202ENST00000414620 CAMK1GQ96NX5 476 aa16.11■□□□□ 0.17
ACTB-202ENST00000414620 C6orf106Q9H6K1 298 aaPredicted RBP16.11■□□□□ 0.17
ACTB-202ENST00000414620 POPDC2Q9HBU9 364 aa16.11■□□□□ 0.17
ACTB-202ENST00000414620 EIF2B4Q9UI10 523 aaKnown RBP16.11■□□□□ 0.17
ACTB-202ENST00000414620 INTS6Q9UL03 887 aaKnown RBP16.11■□□□□ 0.17
ACTB-202ENST00000414620 CACNA1BQ00975 2339 aa16.1■□□□□ 0.17
ACTB-202ENST00000414620 FAM170AA1A519 330 aa16.1■□□□□ 0.17
ACTB-202ENST00000414620 METTL12A8MUP2 240 aa16.1■□□□□ 0.17
ACTB-202ENST00000414620 GRAP2O75791 330 aa16.1■□□□□ 0.17
ACTB-202ENST00000414620 LUC7L3O95232 432 aaKnown RBP16.1■□□□□ 0.17
ACTB-202ENST00000414620 TRUB2O95900 331 aaKnown RBP16.1■□□□□ 0.17
ACTB-202ENST00000414620 DNTTP04053 509 aa16.1■□□□□ 0.17
ACTB-202ENST00000414620 CD59P13987 128 aa16.1■□□□□ 0.17
ACTB-202ENST00000414620 TACR2P21452 398 aa16.1■□□□□ 0.17
ACTB-202ENST00000414620 PON1P27169 355 aa16.1■□□□□ 0.17
ACTB-202ENST00000414620 FAM193AP78312 1265 aa16.1■□□□□ 0.17
ACTB-202ENST00000414620 SIM1P81133 766 aaPredicted RBP16.1■□□□□ 0.17
ACTB-202ENST00000414620 NNTQ13423 1086 aa16.1■□□□□ 0.17
ACTB-202ENST00000414620 MEA1Q16626 185 aa16.1■□□□□ 0.17
ACTB-202ENST00000414620 TMEM110Q86TL2 294 aa16.1■□□□□ 0.17
ACTB-202ENST00000414620 CIR1Q86X95 450 aaPredicted RBP16.1■□□□□ 0.17
ACTB-202ENST00000414620 CCDC117Q8IWD4 279 aaPredicted RBP16.1■□□□□ 0.17
ACTB-202ENST00000414620 DEFB106AQ8N104 65 aa16.1■□□□□ 0.17
ACTB-202ENST00000414620 C1orf131Q8NDD1 294 aaKnown RBP16.1■□□□□ 0.17
ACTB-202ENST00000414620 CADM4Q8NFZ8 388 aa16.1■□□□□ 0.17
ACTB-202ENST00000414620 FIBINQ8TAL6 211 aa16.1■□□□□ 0.17
ACTB-202ENST00000414620 STK32AQ8WU08 396 aa16.1■□□□□ 0.17
ACTB-202ENST00000414620 MYO19Q96H55 970 aa16.1■□□□□ 0.17
ACTB-202ENST00000414620 CPXM1Q96SM3 734 aa16.1■□□□□ 0.17
ACTB-202ENST00000414620 TRIM62Q9BVG3 475 aa16.1■□□□□ 0.17
ACTB-202ENST00000414620 FAM204AQ9H8W3 233 aa16.1■□□□□ 0.17
ACTB-202ENST00000414620 SIX2Q9NPC8 291 aa16.1■□□□□ 0.17
ACTB-202ENST00000414620 DNAAF2Q9NVR5 837 aaKnown RBP16.1■□□□□ 0.17
ACTB-202ENST00000414620 CHMP5Q9NZZ3 219 aa16.1■□□□□ 0.17
ACTB-202ENST00000414620 SLCO1B1Q9Y6L6 691 aa16.1■□□□□ 0.17
ACTB-202ENST00000414620 ACACBO00763 2458 aa16.1■□□□□ 0.17
ACTB-202ENST00000414620 C1QTNF9BB2RNN3 333 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms