RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 SPRYD7Q5W111 196 aa17.67■□□□□ 0.42
PHRF1-202ENST00000413872 PALB2Q86YC2 1186 aa17.67■□□□□ 0.42
PHRF1-202ENST00000413872 RNF168Q8IYW5 571 aaPredicted RBP17.67■□□□□ 0.42
PHRF1-202ENST00000413872 SLAIN1Q8ND83 568 aa17.67■□□□□ 0.42
PHRF1-202ENST00000413872 PURBQ96QR8 312 aaKnown RBP17.67■□□□□ 0.42
PHRF1-202ENST00000413872 GPR20Q99678 358 aa17.67■□□□□ 0.42
PHRF1-202ENST00000413872 BAZ2BQ9UIF8 2168 aaKnown RBP17.67■□□□□ 0.42
PHRF1-202ENST00000413872 FMN2Q9NZ56 1722 aa17.67■□□□□ 0.42
PHRF1-202ENST00000413872 ZNF541Q9H0D2 1346 aa17.67■□□□□ 0.42
PHRF1-202ENST00000413872 ZSCAN5CA6NGD5 496 aaPredicted RBP17.67■□□□□ 0.42
PHRF1-202ENST00000413872 NCF1BA6NI72 391 aaPredicted RBP17.67■□□□□ 0.42
PHRF1-202ENST00000413872 NCF1CA8MVU1 366 aaPredicted RBP17.67■□□□□ 0.42
PHRF1-202ENST00000413872 USP2O75604 605 aaPredicted RBP17.67■□□□□ 0.42
PHRF1-202ENST00000413872 CYP1A1P04798 512 aaPredicted RBP17.67■□□□□ 0.42
PHRF1-202ENST00000413872 MMP3P08254 477 aa17.67■□□□□ 0.42
PHRF1-202ENST00000413872 NCF1P14598 390 aaPredicted RBP17.67■□□□□ 0.42
PHRF1-202ENST00000413872 GRK4P32298 578 aa17.67■□□□□ 0.42
PHRF1-202ENST00000413872 ELK3P41970 407 aa17.67■□□□□ 0.42
PHRF1-202ENST00000413872 GLRBP48167 497 aa17.67■□□□□ 0.42
PHRF1-202ENST00000413872 ITGA7Q13683 1181 aa17.67■□□□□ 0.42
PHRF1-202ENST00000413872 GJC2Q5T442 439 aaPredicted RBP17.67■□□□□ 0.42
PHRF1-202ENST00000413872 MCOLN3Q8TDD5 553 aa17.67■□□□□ 0.42
PHRF1-202ENST00000413872 POLG2Q9UHN1 485 aa17.67■□□□□ 0.42
PHRF1-202ENST00000413872 PFDN1O60925 122 aa17.67■□□□□ 0.42
PHRF1-202ENST00000413872 HDCP19113 662 aa17.67■□□□□ 0.42
PHRF1-202ENST00000413872 HALP42357 657 aa17.67■□□□□ 0.42
PHRF1-202ENST00000413872 ITGB3BPQ13352 177 aaPredicted RBP17.67■□□□□ 0.42
PHRF1-202ENST00000413872 TUSC3Q13454 348 aa17.67■□□□□ 0.42
PHRF1-202ENST00000413872 PIGZQ86VD9 579 aa17.67■□□□□ 0.42
PHRF1-202ENST00000413872 ZNF862O60290 1169 aa17.66■□□□□ 0.42
PHRF1-202ENST00000413872 PIK3CGP48736 1102 aa17.66■□□□□ 0.42
PHRF1-202ENST00000413872 DLG4P78352 724 aa17.66■□□□□ 0.42
PHRF1-202ENST00000413872 MAD2L1Q13257 205 aaPredicted RBP17.66■□□□□ 0.42
PHRF1-202ENST00000413872 KRT87PA6NCN2 255 aa17.66■□□□□ 0.42
PHRF1-202ENST00000413872 PDZK1P1A8MUH7 402 aa17.66■□□□□ 0.42
PHRF1-202ENST00000413872 TMEM114B3SHH9 223 aa17.66■□□□□ 0.42
PHRF1-202ENST00000413872 SMIM22K7EJ46 135 aa17.66■□□□□ 0.42
PHRF1-202ENST00000413872 KPNA3O00505 521 aaPredicted RBP17.66■□□□□ 0.42
PHRF1-202ENST00000413872 TRDMT1O14717 391 aaKnown RBP17.66■□□□□ 0.42
PHRF1-202ENST00000413872 DUSP11O75319 330 aaKnown RBP17.66■□□□□ 0.42
PHRF1-202ENST00000413872 RARAP10276 462 aa17.66■□□□□ 0.42
PHRF1-202ENST00000413872 PSMD5Q16401 504 aa17.66■□□□□ 0.42
PHRF1-202ENST00000413872 NECAB2Q7Z6G3 386 aa17.66■□□□□ 0.42
PHRF1-202ENST00000413872 PHF13Q86YI8 300 aaPredicted RBP17.66■□□□□ 0.42
PHRF1-202ENST00000413872 CCDC3Q9BQI4 270 aa17.66■□□□□ 0.42
PHRF1-202ENST00000413872 IGFLR1Q9H665 355 aa17.66■□□□□ 0.42
PHRF1-202ENST00000413872 MRPS23Q9Y3D9 190 aaKnown RBP17.66■□□□□ 0.42
PHRF1-202ENST00000413872 HES2Q9Y543 173 aa17.66■□□□□ 0.42
PHRF1-202ENST00000413872 IFNA14P01570 189 aa17.66■□□□□ 0.42
PHRF1-202ENST00000413872 CYP1A2P05177 515 aa17.66■□□□□ 0.42
PHRF1-202ENST00000413872 ZNF280AP59817 542 aaPredicted RBP17.66■□□□□ 0.42
PHRF1-202ENST00000413872 SNRPD1P62314 119 aaKnown RBP17.66■□□□□ 0.42
PHRF1-202ENST00000413872 SLC45A4Q5BKX6 768 aa17.66■□□□□ 0.42
PHRF1-202ENST00000413872 TRMT11Q7Z4G4 463 aaKnown RBP17.66■□□□□ 0.42
PHRF1-202ENST00000413872 OXCT2Q9BYC2 517 aaPredicted RBP17.66■□□□□ 0.42
PHRF1-202ENST00000413872 RGS18Q9NS28 235 aa17.66■□□□□ 0.42
PHRF1-202ENST00000413872 FBXL21Q9UKT6 434 aa17.66■□□□□ 0.42
PHRF1-202ENST00000413872 YDJCA8MPS7 323 aa17.66■□□□□ 0.42
PHRF1-202ENST00000413872 KCNK1O00180 336 aa17.66■□□□□ 0.42
PHRF1-202ENST00000413872 FGF19O95750 216 aa17.66■□□□□ 0.42
PHRF1-202ENST00000413872 CCNG1P51959 295 aa17.66■□□□□ 0.42
PHRF1-202ENST00000413872 ACOX1Q15067 660 aa17.65■□□□□ 0.42
PHRF1-202ENST00000413872 TLR10Q9BXR5 811 aa17.65■□□□□ 0.42
PHRF1-202ENST00000413872 KRCC1Q9NPI7 259 aaPredicted RBP17.65■□□□□ 0.42
PHRF1-202ENST00000413872 VAV3Q9UKW4 847 aa17.65■□□□□ 0.42
PHRF1-202ENST00000413872 PCDHGC5Q9Y5F6 944 aa17.65■□□□□ 0.42
PHRF1-202ENST00000413872 DARSP14868 501 aaKnown RBP17.65■□□□□ 0.42
PHRF1-202ENST00000413872 ICAM3P32942 547 aa17.65■□□□□ 0.42
PHRF1-202ENST00000413872 MYLPFQ96A32 169 aa17.65■□□□□ 0.42
PHRF1-202ENST00000413872 DEFB118Q96PH6 123 aa17.65■□□□□ 0.42
PHRF1-202ENST00000413872 ADNPQ9H2P0 1102 aa17.65■□□□□ 0.42
PHRF1-202ENST00000413872 DMGDHQ9UI17 866 aaKnown RBP17.65■□□□□ 0.42
PHRF1-202ENST00000413872 BMP10O95393 424 aa17.65■□□□□ 0.42
PHRF1-202ENST00000413872 MAMLD1Q13495 774 aa17.65■□□□□ 0.42
PHRF1-202ENST00000413872 FBXL19Q6PCT2 694 aa17.65■□□□□ 0.42
PHRF1-202ENST00000413872 MFSD14AQ96MC6 490 aa17.65■□□□□ 0.42
PHRF1-202ENST00000413872 CYP4F12Q9HCS2 524 aa17.65■□□□□ 0.42
PHRF1-202ENST00000413872 CNGB3Q9NQW8 809 aa17.65■□□□□ 0.42
PHRF1-202ENST00000413872 LAG3P18627 525 aa17.65■□□□□ 0.42
PHRF1-202ENST00000413872 NUDT2P50583 147 aa17.65■□□□□ 0.42
PHRF1-202ENST00000413872 SKP1P63208 163 aa17.65■□□□□ 0.42
PHRF1-202ENST00000413872 ITIH4Q14624 930 aa17.65■□□□□ 0.42
PHRF1-202ENST00000413872 LAYNQ6UX15 382 aa17.65■□□□□ 0.42
PHRF1-202ENST00000413872 NLNQ9BYT8 704 aa17.65■□□□□ 0.42
PHRF1-202ENST00000413872 IL1RL2Q9HB29 575 aa17.65■□□□□ 0.42
PHRF1-202ENST00000413872 TBC1D3BA6NDS4 549 aa17.65■□□□□ 0.42
PHRF1-202ENST00000413872 MGAT1P26572 445 aa17.65■□□□□ 0.42
PHRF1-202ENST00000413872 SERPINB10P48595 397 aa17.65■□□□□ 0.42
PHRF1-202ENST00000413872 SERPINH1P50454 418 aaKnown RBP17.65■□□□□ 0.42
PHRF1-202ENST00000413872 CDC16Q13042 620 aa17.65■□□□□ 0.42
PHRF1-202ENST00000413872 PRKAA1Q13131 559 aa17.65■□□□□ 0.42
PHRF1-202ENST00000413872 WLSQ5T9L3 541 aa17.65■□□□□ 0.42
PHRF1-202ENST00000413872 LRP10Q7Z4F1 713 aa17.65■□□□□ 0.42
PHRF1-202ENST00000413872 HJURPQ8NCD3 748 aaPredicted RBP17.65■□□□□ 0.42
PHRF1-202ENST00000413872 SPPL2BQ8TCT7 592 aa17.65■□□□□ 0.42
PHRF1-202ENST00000413872 JADE3Q92613 823 aa17.65■□□□□ 0.42
PHRF1-202ENST00000413872 REPS1Q96D71 796 aa17.65■□□□□ 0.42
PHRF1-202ENST00000413872 ASB2Q96Q27 587 aa17.65■□□□□ 0.42
PHRF1-202ENST00000413872 ZYG11BQ9C0D3 744 aa17.65■□□□□ 0.42
PHRF1-202ENST00000413872 RNPEPQ9H4A4 650 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms