RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 TRIM51Q9BSJ1 452 aa8.76□□□□□ -1.01
SYNE1-211ENST00000413186 SNRNP25Q9BV90 132 aaKnown RBP8.76□□□□□ -1.01
SYNE1-211ENST00000413186 C2orf49Q9BVC5 232 aaPredicted RBP8.76□□□□□ -1.01
SYNE1-211ENST00000413186 RCOR3Q9P2K3 495 aaPredicted RBP8.76□□□□□ -1.01
SYNE1-211ENST00000413186 NUDT5Q9UKK9 219 aa8.76□□□□□ -1.01
SYNE1-211ENST00000413186 ATRXP46100 2492 aa8.76□□□□□ -1.01
SYNE1-211ENST00000413186 PYGMP11217 842 aa8.76□□□□□ -1.01
SYNE1-211ENST00000413186 DAOAP59103 153 aa8.76□□□□□ -1.01
SYNE1-211ENST00000413186 RHOAP61586 193 aa8.76□□□□□ -1.01
SYNE1-211ENST00000413186 CLDN10P78369 228 aa8.76□□□□□ -1.01
SYNE1-211ENST00000413186 FSCBQ5H9T9 825 aa8.76□□□□□ -1.01
SYNE1-211ENST00000413186 LLGL2Q6P1M3 1020 aa8.76□□□□□ -1.01
SYNE1-211ENST00000413186 METTL3Q86U44 580 aaKnown RBP8.76□□□□□ -1.01
SYNE1-211ENST00000413186 IPMKQ8NFU5 416 aa8.76□□□□□ -1.01
SYNE1-211ENST00000413186 ZYG11BQ9C0D3 744 aa8.76□□□□□ -1.01
SYNE1-211ENST00000413186 GPR88Q9GZN0 384 aa8.76□□□□□ -1.01
SYNE1-211ENST00000413186 PCDH9Q9HC56 1237 aa8.76□□□□□ -1.01
SYNE1-211ENST00000413186 VCX3AQ9NNX9 186 aa8.76□□□□□ -1.01
SYNE1-211ENST00000413186 NSMCE4AQ9NXX6 385 aa8.76□□□□□ -1.01
SYNE1-211ENST00000413186 VANGL2Q9ULK5 521 aa8.76□□□□□ -1.01
SYNE1-211ENST00000413186 HBS1LQ9Y450 684 aaKnown RBP8.76□□□□□ -1.01
SYNE1-211ENST00000413186 RAD54BQ9Y620 910 aa8.76□□□□□ -1.01
SYNE1-211ENST00000413186 ZSCAN5CA6NGD5 496 aaPredicted RBP8.76□□□□□ -1.01
SYNE1-211ENST00000413186 JCHAINP01591 159 aa8.76□□□□□ -1.01
SYNE1-211ENST00000413186 RB1P06400 928 aa8.76□□□□□ -1.01
SYNE1-211ENST00000413186 FECHP22830 423 aa8.76□□□□□ -1.01
SYNE1-211ENST00000413186 AMPD1P23109 780 aa8.76□□□□□ -1.01
SYNE1-211ENST00000413186 GPD2P43304 727 aa8.76□□□□□ -1.01
SYNE1-211ENST00000413186 RBM23Q86U06 439 aaKnown RBP8.76□□□□□ -1.01
SYNE1-211ENST00000413186 CAVIN3Q969G5 261 aa8.76□□□□□ -1.01
SYNE1-211ENST00000413186 BTN2A3PQ96KV6 586 aa8.76□□□□□ -1.01
SYNE1-211ENST00000413186 FUT8Q9BYC5 575 aa8.76□□□□□ -1.01
SYNE1-211ENST00000413186 CIPCQ9C0C6 399 aa8.76□□□□□ -1.01
SYNE1-211ENST00000413186 PNPLA8Q9NP80 782 aa8.76□□□□□ -1.01
SYNE1-211ENST00000413186 ZFATQ9P243 1243 aa8.76□□□□□ -1.01
SYNE1-211ENST00000413186 SLC30A1Q9Y6M5 507 aa8.76□□□□□ -1.01
SYNE1-211ENST00000413186 CBX4O00257 560 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 PPEF2O14830 753 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 LSM1O15116 133 aaKnown RBP8.75□□□□□ -1.01
SYNE1-211ENST00000413186 TBC1D4O60343 1298 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 FGF18O76093 207 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 ATP5BP06576 529 aaKnown RBP8.75□□□□□ -1.01
SYNE1-211ENST00000413186 MAGEA11P43364 429 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 C15orf39Q6ZRI6 1047 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 RIBC1Q8N443 379 aaPredicted RBP8.75□□□□□ -1.01
SYNE1-211ENST00000413186 KCTD13Q8WZ19 329 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 GRAMD1AQ96CP6 724 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 C8orf48Q96LL4 319 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 RIPOR3Q96MK2 946 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 GBP5Q96PP8 586 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 XYLT2Q9H1B5 865 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 GMIPQ9P107 970 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 ZC3H7BQ9UGR2 993 aaKnown RBP8.75□□□□□ -1.01
SYNE1-211ENST00000413186 EFR3BQ9Y2G0 817 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 RRP15Q9Y3B9 282 aaKnown RBP8.75□□□□□ -1.01
SYNE1-211ENST00000413186 A0A1W2PQH9 124 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.75□□□□□ -1.01
SYNE1-211ENST00000413186 F5H423 210 aaPredicted RBP8.75□□□□□ -1.01
SYNE1-211ENST00000413186 CDC40O60508 579 aaKnown RBP eCLIP8.75□□□□□ -1.01
SYNE1-211ENST00000413186 ADRA1BP35368 520 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 HADHBP55084 474 aaKnown RBP8.75□□□□□ -1.01
SYNE1-211ENST00000413186 UBXN11Q5T124 520 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 MFN1Q8IWA4 741 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 PGBD3Q8N328 593 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 PPM1NQ8N819 430 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 MGARPQ8TDB4 240 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 MCUR1Q96AQ8 359 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 SH3GL2Q99962 352 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 FAM118BQ9BPY3 351 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 B3GNT5Q9BYG0 378 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 FAM96AQ9H5X1 160 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 DIABLOQ9NR28 239 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 RBM22Q9NW64 420 aaKnown RBP eCLIP8.75□□□□□ -1.01
SYNE1-211ENST00000413186 SMARCAL1Q9NZC9 954 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 KIF13BQ9NQT8 1826 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 MTA2O94776 668 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 POLBP06746 335 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 SERPINF2P08697 491 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 UNGP13051 313 aaPredicted RBP8.75□□□□□ -1.01
SYNE1-211ENST00000413186 CHRNB2P17787 502 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 SPARCL1Q14515 664 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 SPDYCQ5MJ68 293 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 MFSD4BQ5TF39 518 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 TFAP2DQ7Z6R9 452 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 TMEM139Q8IV31 216 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 ZNF461Q8TAF7 563 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 ASZ1Q8WWH4 475 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 OMA1Q96E52 524 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 ZNF333Q96JL9 665 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 SLC4A5Q9BY07 1137 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 EPC1Q9H2F5 836 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 TLR9Q9NR96 1032 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 WHRNQ9P202 907 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 SEPT3Q9UH03 358 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 GMNCA6NCL1 334 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 SLC38A8A6NNN8 435 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 MAN1A2O60476 641 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 TSPAN3O60637 253 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 KCNA4P22459 653 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 PHEXP78562 749 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 514.1 ms