RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 CHST13Q8NET6 341 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 TMEM47Q9BQJ4 181 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 EMC3Q9P0I2 261 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 BAIAP2Q9UQB8 552 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 SLC9A8Q9Y2E8 581 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 C1orf232A0A0U1RR37 186 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 OR14I1A6ND48 311 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 OR6B1O95007 311 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 PTPN1P18031 435 aaKnown RBP7.54□□□□□ -1.2
PTPN3-203ENST00000412145 CES1P23141 567 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 HSD17B3P37058 310 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 ALDH3A2P51648 485 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 PTSQ03393 145 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 FOXD4Q12950 439 aaPredicted RBP7.54□□□□□ -1.2
PTPN3-203ENST00000412145 ZBTB6Q15916 424 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 SLC15A2Q16348 729 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 NFE2Q16621 373 aaPredicted RBP7.54□□□□□ -1.2
PTPN3-203ENST00000412145 MDH1BQ5I0G3 518 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 MROH9Q5TGP6 573 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 RBM43Q6ZSC3 357 aaKnown RBP7.54□□□□□ -1.2
PTPN3-203ENST00000412145 RBM47A0AV96 593 aaKnown RBP7.54□□□□□ -1.2
PTPN3-203ENST00000412145 LHX1P48742 406 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 FXR2P51116 673 aaKnown RBP eCLIP7.54□□□□□ -1.2
PTPN3-203ENST00000412145 PDX1P52945 283 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 PCBP1Q15365 356 aaKnown RBP eCLIP7.54□□□□□ -1.2
PTPN3-203ENST00000412145 ZSWIM7Q19AV6 140 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 HKDC1Q2TB90 917 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 VPS26BQ4G0F5 336 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 SUSD4Q5VX71 490 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 TUBA3EQ6PEY2 450 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 LRRC74BQ6ZQY2 392 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 GAS2L3Q86XJ1 694 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 SPAG16Q8N0X2 631 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 SYNE4Q8N205 404 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 SMYD1Q8NB12 490 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 SRFBP1Q8NEF9 429 aaKnown RBP7.54□□□□□ -1.2
PTPN3-203ENST00000412145 BORCS5Q969J3 196 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 ATXN7L3BQ96GX2 97 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 MPP4Q96JB8 637 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 PRMT5O14744 637 aaPredicted RBP7.54□□□□□ -1.2
PTPN3-203ENST00000412145 KCNH1O95259 989 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 ITGA4P13612 1032 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 ALOX12P18054 663 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 TARSP26639 723 aaKnown RBP7.54□□□□□ -1.2
PTPN3-203ENST00000412145 RPL5P46777 297 aaKnown RBP7.54□□□□□ -1.2
PTPN3-203ENST00000412145 CREMQ03060 361 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 DPYSQ14117 519 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 AKAP14Q86UN6 197 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 GDPD5Q8WTR4 605 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 CKAP2Q8WWK9 683 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 RNPEPQ9H4A4 650 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 PCDH10Q9P2E7 1040 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 C15orf41Q9Y2V0 281 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 CLUHO75153 1309 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 IGSF1Q8N6C5 1336 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 A0A087WZ62 844 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 LOC100653049A0A140TA62 436 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 PRAMEF22A3QJZ6 481 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 MAGEB3O15480 346 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 CYP26A1O43174 497 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 HBP1O60381 514 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 BST2Q10589 180 aaKnown RBP7.54□□□□□ -1.2
PTPN3-203ENST00000412145 ZNF394Q53GI3 561 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 ZNF746Q6NUN9 644 aaPredicted RBP7.54□□□□□ -1.2
PTPN3-203ENST00000412145 PACS1Q6VY07 963 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 PLCZ1Q86YW0 608 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 ITFG1Q8TB96 612 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 C18orf25Q96B23 403 aaPredicted RBP7.54□□□□□ -1.2
PTPN3-203ENST00000412145 PIN4Q9Y237 131 aaKnown RBP7.54□□□□□ -1.2
PTPN3-203ENST00000412145 OVOS2A0A0G2JMS6 1433 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 OVOS2A0A0J9YW53 1432 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 OVOS2Q6IE36 1432 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 PLA2G6O60733 806 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 TNFRSF21O75509 655 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 GCATO75600 419 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 CPA3P15088 417 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 PTX3P26022 381 aaPredicted RBP7.54□□□□□ -1.2
PTPN3-203ENST00000412145 RPL9P32969 192 aaKnown RBP7.54□□□□□ -1.2
PTPN3-203ENST00000412145 UBE2SQ16763 222 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 NAIF1Q69YI7 327 aaPredicted RBP7.54□□□□□ -1.2
PTPN3-203ENST00000412145 COMMD2Q86X83 199 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 NEDD1Q8NHV4 660 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 WDR48Q8TAF3 677 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 PNPT1Q8TCS8 783 aaKnown RBP7.54□□□□□ -1.2
PTPN3-203ENST00000412145 TMEM159Q96B96 161 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 CAB39LQ9H9S4 337 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 POLR1BQ9H9Y6 1135 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 LY9Q9HBG7 655 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.54□□□□□ -1.2
PTPN3-203ENST00000412145 TAS2R13Q9NYV9 303 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 H7C1W4 665 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 SMNDC1O75940 238 aaKnown RBP eCLIP7.54□□□□□ -1.2
PTPN3-203ENST00000412145 LRG1P02750 347 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 HOXA13P31271 388 aaPredicted RBP7.54□□□□□ -1.2
PTPN3-203ENST00000412145 SDC2P34741 201 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 UBXN2AP68543 259 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 GALNTL6Q49A17 601 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 ARCQ7LC44 396 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 PHACTR4Q8IZ21 702 aa7.54□□□□□ -1.2
PTPN3-203ENST00000412145 MAGEE2Q8TD90 523 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms