RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 NPC1O15118 1278 aa12.03□□□□□ -0.48
LINC00963-201ENST00000412141 KRT37O76014 449 aa12.03□□□□□ -0.48
LINC00963-201ENST00000412141 TRUB2O95900 331 aaKnown RBP12.03□□□□□ -0.48
LINC00963-201ENST00000412141 APOEP02649 317 aa12.03□□□□□ -0.48
LINC00963-201ENST00000412141 CD6P30203 668 aa12.03□□□□□ -0.48
LINC00963-201ENST00000412141 RPL34P49207 117 aaKnown RBP12.03□□□□□ -0.48
LINC00963-201ENST00000412141 NOVA1P51513 510 aaKnown RBP12.03□□□□□ -0.48
LINC00963-201ENST00000412141 TPMTP51580 245 aa12.03□□□□□ -0.48
LINC00963-201ENST00000412141 ATXN3P54252 364 aaPredicted RBP12.03□□□□□ -0.48
LINC00963-201ENST00000412141 RNASE9P60153 205 aaKnown RBP12.03□□□□□ -0.48
LINC00963-201ENST00000412141 KCNJ12Q14500 433 aa12.03□□□□□ -0.48
LINC00963-201ENST00000412141 CHSY1Q86X52 802 aa12.03□□□□□ -0.48
LINC00963-201ENST00000412141 CIR1Q86X95 450 aaPredicted RBP12.03□□□□□ -0.48
LINC00963-201ENST00000412141 CCDC117Q8IWD4 279 aaPredicted RBP12.03□□□□□ -0.48
LINC00963-201ENST00000412141 DEFB106AQ8N104 65 aa12.03□□□□□ -0.48
LINC00963-201ENST00000412141 HJURPQ8NCD3 748 aaPredicted RBP12.03□□□□□ -0.48
LINC00963-201ENST00000412141 WFIKKN2Q8TEU8 576 aa12.03□□□□□ -0.48
LINC00963-201ENST00000412141 STK32AQ8WU08 396 aa12.03□□□□□ -0.48
LINC00963-201ENST00000412141 FAM81BQ96LP2 452 aa12.03□□□□□ -0.48
LINC00963-201ENST00000412141 PRICKLE1Q96MT3 831 aaPredicted RBP12.03□□□□□ -0.48
LINC00963-201ENST00000412141 DDX50Q9BQ39 737 aaKnown RBP12.03□□□□□ -0.48
LINC00963-201ENST00000412141 POPDC2Q9HBU9 364 aa12.03□□□□□ -0.48
LINC00963-201ENST00000412141 ITM2CQ9NQX7 267 aa12.03□□□□□ -0.48
LINC00963-201ENST00000412141 LMBRD1Q9NUN5 540 aa12.03□□□□□ -0.48
LINC00963-201ENST00000412141 TAB2Q9NYJ8 693 aa12.03□□□□□ -0.48
LINC00963-201ENST00000412141 DACH1Q9UI36 760 aa12.03□□□□□ -0.48
LINC00963-201ENST00000412141 CEP83Q9Y592 693 aa12.03□□□□□ -0.48
LINC00963-201ENST00000412141 ASCC3Q8N3C0 2202 aaKnown RBP12.03□□□□□ -0.48
LINC00963-201ENST00000412141 MEI4A8MW99 385 aa12.02□□□□□ -0.49
LINC00963-201ENST00000412141 H0Y626 953 aa12.02□□□□□ -0.49
LINC00963-201ENST00000412141 ERBB2P04626 1255 aa12.02□□□□□ -0.49
LINC00963-201ENST00000412141 ATP5BP06576 529 aaKnown RBP12.02□□□□□ -0.49
LINC00963-201ENST00000412141 DLDP09622 509 aaKnown RBP12.02□□□□□ -0.49
LINC00963-201ENST00000412141 TACR2P21452 398 aa12.02□□□□□ -0.49
LINC00963-201ENST00000412141 ERCC5P28715 1186 aaPredicted RBP12.02□□□□□ -0.49
LINC00963-201ENST00000412141 CLCN1P35523 988 aa12.02□□□□□ -0.49
LINC00963-201ENST00000412141 CTSOP43234 321 aaPredicted RBP12.02□□□□□ -0.49
LINC00963-201ENST00000412141 COPAP53621 1224 aa12.02□□□□□ -0.49
LINC00963-201ENST00000412141 ZNF445P59923 1031 aa12.02□□□□□ -0.49
LINC00963-201ENST00000412141 CDK17Q00537 523 aa12.02□□□□□ -0.49
LINC00963-201ENST00000412141 GFPT1Q06210 699 aaPredicted RBP12.02□□□□□ -0.49
LINC00963-201ENST00000412141 LMAN2Q12907 356 aa12.02□□□□□ -0.49
LINC00963-201ENST00000412141 NME3Q13232 169 aa12.02□□□□□ -0.49
LINC00963-201ENST00000412141 CDH18Q13634 790 aa12.02□□□□□ -0.49
LINC00963-201ENST00000412141 ENPP2Q13822 863 aa12.02□□□□□ -0.49
LINC00963-201ENST00000412141 DRAP1Q14919 205 aaPredicted RBP12.02□□□□□ -0.49
LINC00963-201ENST00000412141 DUOXA1Q1HG43 343 aa12.02□□□□□ -0.49
LINC00963-201ENST00000412141 FSCBQ5H9T9 825 aa12.02□□□□□ -0.49
LINC00963-201ENST00000412141 MS4A13Q5J8X5 152 aa12.02□□□□□ -0.49
LINC00963-201ENST00000412141 MIIPQ5JXC2 388 aa12.02□□□□□ -0.49
LINC00963-201ENST00000412141 SPDYCQ5MJ68 293 aa12.02□□□□□ -0.49
LINC00963-201ENST00000412141 SH3PXD2AQ5TCZ1 1133 aa12.02□□□□□ -0.49
LINC00963-201ENST00000412141 TAF3Q5VWG9 929 aa12.02□□□□□ -0.49
LINC00963-201ENST00000412141 FAM183BPQ6ZVS7 135 aa12.02□□□□□ -0.49
LINC00963-201ENST00000412141 AHI1Q8N157 1196 aa12.02□□□□□ -0.49
LINC00963-201ENST00000412141 SNX19Q92543 992 aa12.02□□□□□ -0.49
LINC00963-201ENST00000412141 SLC39A13Q96H72 371 aa12.02□□□□□ -0.49
LINC00963-201ENST00000412141 DDIT4Q9NX09 232 aa12.02□□□□□ -0.49
LINC00963-201ENST00000412141 WSB2Q9NYS7 404 aaPredicted RBP12.02□□□□□ -0.49
LINC00963-201ENST00000412141 EVLQ9UI08 416 aaPredicted RBP12.02□□□□□ -0.49
LINC00963-201ENST00000412141 SLC6A14Q9UN76 642 aa12.02□□□□□ -0.49
LINC00963-201ENST00000412141 FHOD1Q9Y613 1164 aa12.02□□□□□ -0.49
LINC00963-201ENST00000412141 WDFY3Q8IZQ1 3526 aa12.02□□□□□ -0.49
LINC00963-201ENST00000412141 MAP1BP46821 2468 aaKnown RBP12.02□□□□□ -0.49
LINC00963-201ENST00000412141 NUMA1Q14980 2115 aa12.01□□□□□ -0.49
LINC00963-201ENST00000412141 IRAK2O43187 625 aa12.01□□□□□ -0.49
LINC00963-201ENST00000412141 GGCXP38435 758 aa12.01□□□□□ -0.49
LINC00963-201ENST00000412141 CSKP41240 450 aa12.01□□□□□ -0.49
LINC00963-201ENST00000412141 KCNMA1Q12791 1236 aa12.01□□□□□ -0.49
LINC00963-201ENST00000412141 E2F5Q15329 346 aa12.01□□□□□ -0.49
LINC00963-201ENST00000412141 PTPRNQ16849 979 aa12.01□□□□□ -0.49
LINC00963-201ENST00000412141 PLEKHG6Q3KR16 790 aa12.01□□□□□ -0.49
LINC00963-201ENST00000412141 SYCP2LQ5T4T6 812 aa12.01□□□□□ -0.49
LINC00963-201ENST00000412141 SLC23A3Q6PIS1 610 aa12.01□□□□□ -0.49
LINC00963-201ENST00000412141 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.01□□□□□ -0.49
LINC00963-201ENST00000412141 DEFB124Q8NES8 71 aa12.01□□□□□ -0.49
LINC00963-201ENST00000412141 OR2T3Q8NH03 318 aa12.01□□□□□ -0.49
LINC00963-201ENST00000412141 FIBINQ8TAL6 211 aa12.01□□□□□ -0.49
LINC00963-201ENST00000412141 GANCQ8TET4 914 aa12.01□□□□□ -0.49
LINC00963-201ENST00000412141 AZIN2Q96A70 460 aa12.01□□□□□ -0.49
LINC00963-201ENST00000412141 ZNF419Q96HQ0 510 aaPredicted RBP12.01□□□□□ -0.49
LINC00963-201ENST00000412141 NOX5Q96PH1 765 aa12.01□□□□□ -0.49
LINC00963-201ENST00000412141 TRIM62Q9BVG3 475 aa12.01□□□□□ -0.49
LINC00963-201ENST00000412141 VPS16Q9H269 839 aa12.01□□□□□ -0.49
LINC00963-201ENST00000412141 LHX5Q9H2C1 402 aa12.01□□□□□ -0.49
LINC00963-201ENST00000412141 USP36Q9P275 1121 aaKnown RBP12.01□□□□□ -0.49
LINC00963-201ENST00000412141 SLC12A6Q9UHW9 1150 aa12.01□□□□□ -0.49
LINC00963-201ENST00000412141 INTS6Q9UL03 887 aaKnown RBP12.01□□□□□ -0.49
LINC00963-201ENST00000412141 NFE2L3Q9Y4A8 694 aa12.01□□□□□ -0.49
LINC00963-201ENST00000412141 CACNA1BQ00975 2339 aa12.01□□□□□ -0.49
LINC00963-201ENST00000412141 SERPINF2P08697 491 aa12□□□□□ -0.49
LINC00963-201ENST00000412141 ABCB4P21439 1286 aa12□□□□□ -0.49
LINC00963-201ENST00000412141 KLK7P49862 253 aa12□□□□□ -0.49
LINC00963-201ENST00000412141 ST8SIA6P61647 398 aa12□□□□□ -0.49
LINC00963-201ENST00000412141 NNTQ13423 1086 aa12□□□□□ -0.49
LINC00963-201ENST00000412141 CAMK2GQ13555 558 aaPredicted RBP12□□□□□ -0.49
LINC00963-201ENST00000412141 MEA1Q16626 185 aa12□□□□□ -0.49
LINC00963-201ENST00000412141 PTPN20Q4JDL3 420 aa12□□□□□ -0.49
LINC00963-201ENST00000412141 C2CD6Q53TS8 623 aa12□□□□□ -0.49
LINC00963-201ENST00000412141 TCP11X2Q5H9J9 407 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms