RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 CHKBQ9Y259 395 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 CFL2Q9Y281 166 aa4.69□□□□□ -1.66
PTPN13-202ENST00000411767 LCHNA4D1U4 455 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 PDE2AO00408 941 aaPredicted RBP4.68□□□□□ -1.66
PTPN13-202ENST00000411767 FPGTO14772 594 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 SORBS3O60504 671 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 GLRA3O75311 464 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 ME2P23368 584 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 MPIP34949 423 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 ZNF33AQ06730 810 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 CUL2Q13617 745 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 BRMS1LQ5PSV4 323 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 RPL7L1Q6DKI1 246 aaKnown RBP4.68□□□□□ -1.66
PTPN13-202ENST00000411767 TTI2Q6NXR4 508 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 FAM171BQ6P995 826 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 EGFL6Q8IUX8 553 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 GLYCTKQ8IVS8 523 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 MAGEB18Q96M61 343 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 MMADHCQ9H3L0 296 aaPredicted RBP4.68□□□□□ -1.66
PTPN13-202ENST00000411767 FAM83DQ9H4H8 585 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 VPS45Q9NRW7 570 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 TMEM184CQ9NVA4 438 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 PANK4Q9NVE7 773 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.68□□□□□ -1.66
PTPN13-202ENST00000411767 SSR3Q9UNL2 185 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 PKP3Q9Y446 797 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 TTLL8A6PVC2 850 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 TFPTP0C1Z6 253 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 MYL6BP14649 208 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 COPZ1P61923 177 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 MYBPC1Q00872 1141 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 GRIK3Q13003 919 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 CDK10Q15131 360 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 LRRC24Q50LG9 513 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 CYP4F22Q6NT55 531 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 IQCHQ86VS3 1027 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 NIPA2Q8N8Q9 360 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 LPIN2Q92539 896 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 BAP1Q92560 729 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 TATDN2Q93075 761 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 CABP2Q9NPB3 220 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 CCNL1Q9UK58 526 aaPredicted RBP4.68□□□□□ -1.66
PTPN13-202ENST00000411767 GNEQ9Y223 722 aaKnown RBP4.68□□□□□ -1.66
PTPN13-202ENST00000411767 MRPL11Q9Y3B7 192 aaKnown RBP4.68□□□□□ -1.66
PTPN13-202ENST00000411767 MAGEB16A2A368 324 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 C2orf72A6NCS6 295 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 SRRM3A6NNA2 597 aaPredicted RBP4.68□□□□□ -1.66
PTPN13-202ENST00000411767 FADS1O60427 444 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 FKTNO75072 461 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 METTL18O95568 372 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 SERPINE1P05121 402 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 ANXA6P08133 673 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 CYP2D6P10635 497 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 DNASE1L1P49184 302 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 FABP6P51161 128 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 RAB4BP61018 213 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 CDK3Q00526 305 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 ATP1A4Q13733 1029 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 ARHGEF7Q14155 803 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 SLC1A5Q15758 541 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 RBM48Q5RL73 367 aaKnown RBP4.68□□□□□ -1.66
PTPN13-202ENST00000411767 METTL21CQ5VZV1 264 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 GDPD4Q6W3E5 623 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 ETNPPLQ8TBG4 499 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 TBCKQ8TEA7 893 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 KIF12Q96FN5 646 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 NT5C1BQ96P26 610 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 HIST1H2AAQ96QV6 131 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 DGCR6LQ9BY27 220 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 IFT46Q9NQC8 304 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 HAO2Q9NYQ3 351 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 ZNF214Q9UL59 606 aaPredicted RBP4.68□□□□□ -1.66
PTPN13-202ENST00000411767 PPP2R2CQ9Y2T4 447 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 PRDM2Q13029 1718 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 ARHGAP35Q9NRY4 1499 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 BTBD11A6QL63 1104 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 PGRMC2O15173 223 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 PHGDHO43175 533 aaKnown RBP4.68□□□□□ -1.66
PTPN13-202ENST00000411767 GABBR2O75899 941 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 PGLSO95336 258 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 MT-CO2P00403 227 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 ALDH4A1P30038 563 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 GP5P40197 560 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 RPS6P62753 249 aaKnown RBP4.68□□□□□ -1.66
PTPN13-202ENST00000411767 RAB39AQ14964 217 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 MPPE1Q53F39 396 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 ARHGAP11AQ6P4F7 1023 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 C3orf62Q6ZUJ4 267 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 TMEM26Q6ZUK4 368 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 TMEM192Q8IY95 271 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 RTKN2Q8IZC4 609 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 RELL2Q8NC24 303 aaPredicted RBP4.68□□□□□ -1.66
PTPN13-202ENST00000411767 COQ8AQ8NI60 647 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 SGSM3Q96HU1 749 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 NECAB3Q96P71 396 aaPredicted RBP4.68□□□□□ -1.66
PTPN13-202ENST00000411767 IRX2Q9BZI1 471 aaPredicted RBP4.68□□□□□ -1.66
PTPN13-202ENST00000411767 DPY30Q9C005 99 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 SMURF1Q9HCE7 757 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 KCNIP2Q9NS61 270 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 PPP4R1LQ9P1A2 415 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms