RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 LRIG2O94898 1065 aa15.72■□□□□ 0.11
LSM5-207ENST00000410044 FTCDO95954 541 aa15.72■□□□□ 0.11
LSM5-207ENST00000410044 KDELR1P24390 212 aa15.72■□□□□ 0.11
LSM5-207ENST00000410044 IL4RP24394 825 aa15.72■□□□□ 0.11
LSM5-207ENST00000410044 GDI1P31150 447 aa15.72■□□□□ 0.11
LSM5-207ENST00000410044 GRM2Q14416 872 aa15.72■□□□□ 0.11
LSM5-207ENST00000410044 DHCR24Q15392 516 aa15.72■□□□□ 0.11
LSM5-207ENST00000410044 TAZQ16635 292 aa15.72■□□□□ 0.11
LSM5-207ENST00000410044 MPPE1Q53F39 396 aa15.72■□□□□ 0.11
LSM5-207ENST00000410044 ZNF569Q5MCW4 686 aa15.72■□□□□ 0.11
LSM5-207ENST00000410044 FAM72AQ5TYM5 149 aa15.72■□□□□ 0.11
LSM5-207ENST00000410044 FAM72DQ6L9T8 149 aa15.72■□□□□ 0.11
LSM5-207ENST00000410044 FAM72BQ86X60 149 aa15.72■□□□□ 0.11
LSM5-207ENST00000410044 RCOR2Q8IZ40 523 aa15.72■□□□□ 0.11
LSM5-207ENST00000410044 PYROXD2Q8N2H3 581 aa15.72■□□□□ 0.11
LSM5-207ENST00000410044 ST13P5Q8NFI4 369 aaPredicted RBP15.72■□□□□ 0.11
LSM5-207ENST00000410044 TSC1Q92574 1164 aa15.72■□□□□ 0.11
LSM5-207ENST00000410044 KRT35Q92764 455 aa15.72■□□□□ 0.11
LSM5-207ENST00000410044 ATP2A3Q93084 1043 aa15.72■□□□□ 0.11
LSM5-207ENST00000410044 TMA16Q96EY4 203 aaKnown RBP15.72■□□□□ 0.11
LSM5-207ENST00000410044 KCTD15Q96SI1 283 aaPredicted RBP15.72■□□□□ 0.11
LSM5-207ENST00000410044 DHX35Q9H5Z1 703 aaKnown RBP15.72■□□□□ 0.11
LSM5-207ENST00000410044 PCDH18Q9HCL0 1135 aa15.72■□□□□ 0.11
LSM5-207ENST00000410044 HPS4Q9NQG7 708 aa15.72■□□□□ 0.11
LSM5-207ENST00000410044 GPATCH2LQ9NWQ4 482 aa15.72■□□□□ 0.11
LSM5-207ENST00000410044 JRKLQ9Y4A0 524 aa15.72■□□□□ 0.11
LSM5-207ENST00000410044 C3orf70A6NLC5 250 aaPredicted RBP15.71■□□□□ 0.11
LSM5-207ENST00000410044 SCAMP3O14828 347 aaKnown RBP15.71■□□□□ 0.11
LSM5-207ENST00000410044 ZRANB2O95218 330 aaKnown RBP eCLIP15.71■□□□□ 0.11
LSM5-207ENST00000410044 NFATC1O95644 943 aa15.71■□□□□ 0.11
LSM5-207ENST00000410044 PENKP01210 267 aaPredicted RBP15.71■□□□□ 0.11
LSM5-207ENST00000410044 RWDD2BP57060 319 aa15.71■□□□□ 0.11
LSM5-207ENST00000410044 TDGQ13569 410 aa15.71■□□□□ 0.11
LSM5-207ENST00000410044 RUNX3Q13761 415 aa15.71■□□□□ 0.11
LSM5-207ENST00000410044 SMTNL2Q2TAL5 461 aa15.71■□□□□ 0.11
LSM5-207ENST00000410044 TTC39BQ5VTQ0 682 aaPredicted RBP15.71■□□□□ 0.11
LSM5-207ENST00000410044 FYB2Q5VWT5 728 aa15.71■□□□□ 0.11
LSM5-207ENST00000410044 RFWD3Q6PCD5 774 aa15.71■□□□□ 0.11
LSM5-207ENST00000410044 LRRC31Q6UY01 552 aa15.71■□□□□ 0.11
LSM5-207ENST00000410044 ZSCAN30Q86W11 494 aa15.71■□□□□ 0.11
LSM5-207ENST00000410044 CHSY1Q86X52 802 aa15.71■□□□□ 0.11
LSM5-207ENST00000410044 TMEM25Q86YD3 366 aa15.71■□□□□ 0.11
LSM5-207ENST00000410044 MAP7D3Q8IWC1 876 aa15.71■□□□□ 0.11
LSM5-207ENST00000410044 LGI2Q8N0V4 545 aa15.71■□□□□ 0.11
LSM5-207ENST00000410044 SLC35F6Q8N357 371 aa15.71■□□□□ 0.11
LSM5-207ENST00000410044 C17orf53Q8N3J3 647 aaPredicted RBP15.71■□□□□ 0.11
LSM5-207ENST00000410044 UBL4BQ8N7F7 174 aa15.71■□□□□ 0.11
LSM5-207ENST00000410044 KCTD6Q8NC69 237 aa15.71■□□□□ 0.11
LSM5-207ENST00000410044 EXD1Q8NHP7 514 aa15.71■□□□□ 0.11
LSM5-207ENST00000410044 RAPGEF5Q92565 580 aa15.71■□□□□ 0.11
LSM5-207ENST00000410044 HSPH1Q92598 858 aa15.71■□□□□ 0.11
LSM5-207ENST00000410044 IGSF8Q969P0 613 aa15.71■□□□□ 0.11
LSM5-207ENST00000410044 FAF2Q96CS3 445 aa15.71■□□□□ 0.11
LSM5-207ENST00000410044 MYEOVQ96EZ4 313 aa15.71■□□□□ 0.11
LSM5-207ENST00000410044 EPAS1Q99814 870 aa15.71■□□□□ 0.11
LSM5-207ENST00000410044 TLR10Q9BXR5 811 aa15.71■□□□□ 0.11
LSM5-207ENST00000410044 ECT2Q9H8V3 914 aa15.71■□□□□ 0.11
LSM5-207ENST00000410044 SLC2A4RGQ9NR83 387 aa15.71■□□□□ 0.11
LSM5-207ENST00000410044 CWC15Q9P013 229 aaKnown RBP15.71■□□□□ 0.11
LSM5-207ENST00000410044 FBXO10Q9UK96 956 aa15.71■□□□□ 0.11
LSM5-207ENST00000410044 VANGL2Q9ULK5 521 aa15.71■□□□□ 0.11
LSM5-207ENST00000410044 NEU3Q9UQ49 428 aa15.71■□□□□ 0.11
LSM5-207ENST00000410044 SNX10Q9Y5X0 201 aa15.71■□□□□ 0.11
LSM5-207ENST00000410044 COL6A3P12111 3177 aa15.71■□□□□ 0.11
LSM5-207ENST00000410044 SPTBN5Q9NRC6 3674 aaKnown RBP15.71■□□□□ 0.1
LSM5-207ENST00000410044 WASH4PA8MWX3 477 aa15.7■□□□□ 0.1
LSM5-207ENST00000410044 HOXC11O43248 304 aaPredicted RBP15.7■□□□□ 0.1
LSM5-207ENST00000410044 TUBB4AP04350 444 aa15.7■□□□□ 0.1
LSM5-207ENST00000410044 ARSAP15289 507 aa15.7■□□□□ 0.1
LSM5-207ENST00000410044 CDH6P55285 790 aa15.7■□□□□ 0.1
LSM5-207ENST00000410044 COPS2P61201 443 aa15.7■□□□□ 0.1
LSM5-207ENST00000410044 GAD2Q05329 585 aa15.7■□□□□ 0.1
LSM5-207ENST00000410044 NR1H3Q13133 447 aa15.7■□□□□ 0.1
LSM5-207ENST00000410044 DPYSL3Q14195 570 aa15.7■□□□□ 0.1
LSM5-207ENST00000410044 RPS6KA1Q15418 735 aa15.7■□□□□ 0.1
LSM5-207ENST00000410044 RABGAP1LQ5R372 815 aa15.7■□□□□ 0.1
LSM5-207ENST00000410044 LY6G5CQ5SRR4 150 aa15.7■□□□□ 0.1
LSM5-207ENST00000410044 TRIM68Q6AZZ1 485 aa15.7■□□□□ 0.1
LSM5-207ENST00000410044 NYAP1Q6ZVC0 841 aa15.7■□□□□ 0.1
LSM5-207ENST00000410044 CHST9Q7L1S5 443 aa15.7■□□□□ 0.1
LSM5-207ENST00000410044 HJURPQ8NCD3 748 aaPredicted RBP15.7■□□□□ 0.1
LSM5-207ENST00000410044 TTC16Q8NEE8 873 aa15.7■□□□□ 0.1
LSM5-207ENST00000410044 ALG3Q92685 438 aa15.7■□□□□ 0.1
LSM5-207ENST00000410044 DNASE1L2Q92874 299 aa15.7■□□□□ 0.1
LSM5-207ENST00000410044 TBC1D31Q96DN5 1066 aa15.7■□□□□ 0.1
LSM5-207ENST00000410044 P2RY11Q96G91 374 aa15.7■□□□□ 0.1
LSM5-207ENST00000410044 ZFYVE19Q96K21 471 aa15.7■□□□□ 0.1
LSM5-207ENST00000410044 PRICKLE1Q96MT3 831 aaPredicted RBP15.7■□□□□ 0.1
LSM5-207ENST00000410044 ZNF670Q9BS34 389 aa15.7■□□□□ 0.1
LSM5-207ENST00000410044 EBF3Q9H4W6 596 aa15.7■□□□□ 0.1
LSM5-207ENST00000410044 BRD9Q9H8M2 597 aa15.7■□□□□ 0.1
LSM5-207ENST00000410044 PRDM16Q9HAZ2 1276 aa15.7■□□□□ 0.1
LSM5-207ENST00000410044 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.7■□□□□ 0.1
LSM5-207ENST00000410044 ZNF212Q9UDV6 495 aa15.7■□□□□ 0.1
LSM5-207ENST00000410044 PACSIN2Q9UNF0 486 aaPredicted RBP15.7■□□□□ 0.1
LSM5-207ENST00000410044 OTOL1A6NHN0 477 aaPredicted RBP15.69■□□□□ 0.1
LSM5-207ENST00000410044 H3BRJ5 948 aa15.69■□□□□ 0.1
LSM5-207ENST00000410044 TRDMT1O14717 391 aaKnown RBP15.69■□□□□ 0.1
LSM5-207ENST00000410044 TSPAN3O60637 253 aa15.69■□□□□ 0.1
LSM5-207ENST00000410044 SRGAP2O75044 1071 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms