RNA–Protein interactions for RNA: ENST00000409946.5

LRPPRC-203, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 1 (best) BASIC

Gene LRPPRC, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-203ENST00000409946 CCSER2Q9H7U1 834 aa18.11■□□□□ 0.49
LRPPRC-203ENST00000409946 RAB6BQ9NRW1 208 aa18.11■□□□□ 0.49
LRPPRC-203ENST00000409946 PAK5Q9P286 719 aa18.11■□□□□ 0.49
LRPPRC-203ENST00000409946 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.1■□□□□ 0.49
LRPPRC-203ENST00000409946 SMIM23A6NLE4 172 aa18.1■□□□□ 0.49
LRPPRC-203ENST00000409946 KCNU1A8MYU2 1149 aa18.1■□□□□ 0.49
LRPPRC-203ENST00000409946 ABLIM3O94929 683 aa18.1■□□□□ 0.49
LRPPRC-203ENST00000409946 TTC4O95801 387 aa18.1■□□□□ 0.49
LRPPRC-203ENST00000409946 HMBSP08397 361 aa18.1■□□□□ 0.49
LRPPRC-203ENST00000409946 MAGEA4P43358 317 aa18.1■□□□□ 0.49
LRPPRC-203ENST00000409946 TBX4P57082 545 aa18.1■□□□□ 0.49
LRPPRC-203ENST00000409946 FPGSQ05932 587 aa18.1■□□□□ 0.49
LRPPRC-203ENST00000409946 PRKD1Q15139 912 aaPredicted RBP18.1■□□□□ 0.49
LRPPRC-203ENST00000409946 SKIDA1Q1XH10 827 aa18.1■□□□□ 0.49
LRPPRC-203ENST00000409946 KRT71Q3SY84 523 aa18.1■□□□□ 0.49
LRPPRC-203ENST00000409946 CCNYQ8ND76 341 aa18.1■□□□□ 0.49
LRPPRC-203ENST00000409946 ZNF461Q8TAF7 563 aa18.1■□□□□ 0.49
LRPPRC-203ENST00000409946 HTR3CQ8WXA8 447 aa18.1■□□□□ 0.49
LRPPRC-203ENST00000409946 SLC39A13Q96H72 371 aa18.1■□□□□ 0.49
LRPPRC-203ENST00000409946 HAPLN3Q96S86 360 aa18.1■□□□□ 0.49
LRPPRC-203ENST00000409946 TSPYL1Q9H0U9 437 aa18.1■□□□□ 0.49
LRPPRC-203ENST00000409946 PRDM16Q9HAZ2 1276 aa18.1■□□□□ 0.49
LRPPRC-203ENST00000409946 CYP4F11Q9HBI6 524 aa18.1■□□□□ 0.49
LRPPRC-203ENST00000409946 CLIC5Q9NZA1 410 aa18.1■□□□□ 0.49
LRPPRC-203ENST00000409946 TLR6Q9Y2C9 796 aa18.1■□□□□ 0.49
LRPPRC-203ENST00000409946 OBSL1O75147 1896 aa18.1■□□□□ 0.49
LRPPRC-203ENST00000409946 HACD1B0YJ81 288 aa18.09■□□□□ 0.49
LRPPRC-203ENST00000409946 EIF3HO15372 352 aaKnown RBP eCLIP18.09■□□□□ 0.492e-7■□□□□ 9.6
LRPPRC-203ENST00000409946 GJB5O95377 273 aa18.09■□□□□ 0.49
LRPPRC-203ENST00000409946 METTL18O95568 372 aa18.09■□□□□ 0.49
LRPPRC-203ENST00000409946 LINC00271P0C7V0 271 aa18.09■□□□□ 0.49
LRPPRC-203ENST00000409946 MYZAPP0CAP1 466 aa18.09■□□□□ 0.49
LRPPRC-203ENST00000409946 PPIGQ13427 754 aaKnown RBP eCLIP18.09■□□□□ 0.491e-8■□□□□ 11
LRPPRC-203ENST00000409946 KCNJ11Q14654 390 aa18.09■□□□□ 0.49
LRPPRC-203ENST00000409946 MSS51Q4VC12 460 aa18.09■□□□□ 0.49
LRPPRC-203ENST00000409946 PIK3R6Q5UE93 754 aa18.09■□□□□ 0.49
LRPPRC-203ENST00000409946 C14orf80Q86SX3 495 aa18.09■□□□□ 0.49
LRPPRC-203ENST00000409946 CCDC13Q8IYE1 715 aa18.09■□□□□ 0.49
LRPPRC-203ENST00000409946 C7orf61Q8IZ16 206 aa18.09■□□□□ 0.49
LRPPRC-203ENST00000409946 EPS8L3Q8TE67 593 aaKnown RBP18.09■□□□□ 0.49
LRPPRC-203ENST00000409946 FOXP3Q9BZS1 431 aa18.09■□□□□ 0.49
LRPPRC-203ENST00000409946 SEPT10Q9P0V9 454 aa18.09■□□□□ 0.49
LRPPRC-203ENST00000409946 PRKAG2Q9UGJ0 569 aa18.09■□□□□ 0.49
LRPPRC-203ENST00000409946 YIPF1Q9Y548 306 aa18.09■□□□□ 0.49
LRPPRC-203ENST00000409946 HS3ST4Q9Y661 456 aa18.09■□□□□ 0.49
LRPPRC-203ENST00000409946 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.09■□□□□ 0.49
LRPPRC-203ENST00000409946 SYN1P17600 705 aa18.09■□□□□ 0.49
LRPPRC-203ENST00000409946 CA8P35219 290 aa18.09■□□□□ 0.49
LRPPRC-203ENST00000409946 TUFMP49411 452 aaKnown RBP18.09■□□□□ 0.49
LRPPRC-203ENST00000409946 PDIA2Q13087 525 aaKnown RBP18.09■□□□□ 0.49
LRPPRC-203ENST00000409946 PDK1Q15118 436 aa18.09■□□□□ 0.49
LRPPRC-203ENST00000409946 HIF1AQ16665 826 aa18.09■□□□□ 0.49
LRPPRC-203ENST00000409946 MANEALQ5VSG8 457 aa18.09■□□□□ 0.49
LRPPRC-203ENST00000409946 BZW1Q7L1Q6 419 aaKnown RBP18.09■□□□□ 0.49
LRPPRC-203ENST00000409946 HOOK3Q86VS8 718 aa18.09■□□□□ 0.49
LRPPRC-203ENST00000409946 ANKMY2Q8IV38 441 aa18.09■□□□□ 0.49
LRPPRC-203ENST00000409946 P2RY11Q96G91 374 aa18.09■□□□□ 0.49
LRPPRC-203ENST00000409946 CELF6Q96J87 481 aaKnown RBP18.09■□□□□ 0.49
LRPPRC-203ENST00000409946 TTLL2Q9BWV7 592 aa18.09■□□□□ 0.49
LRPPRC-203ENST00000409946 ETNK1Q9HBU6 452 aa18.09■□□□□ 0.49
LRPPRC-203ENST00000409946 MARCH2Q9P0N8 246 aa18.09■□□□□ 0.49
LRPPRC-203ENST00000409946 BCCIPQ9P287 314 aaKnown RBP eCLIP18.09■□□□□ 0.49
LRPPRC-203ENST00000409946 LAMA2P24043 3122 aaKnown RBP18.08■□□□□ 0.49
LRPPRC-203ENST00000409946 RNF103O00237 685 aa18.08■□□□□ 0.48
LRPPRC-203ENST00000409946 PPP1R12AO14974 1030 aaPredicted RBP18.08■□□□□ 0.48
LRPPRC-203ENST00000409946 GCATO75600 419 aa18.08■□□□□ 0.48
LRPPRC-203ENST00000409946 FGF18O76093 207 aa18.08■□□□□ 0.48
LRPPRC-203ENST00000409946 CSPG5O95196 566 aa18.08■□□□□ 0.48
LRPPRC-203ENST00000409946 ZDHHC11BP0C7U3 371 aa18.08■□□□□ 0.48
LRPPRC-203ENST00000409946 PSEN1P49768 467 aa18.08■□□□□ 0.48
LRPPRC-203ENST00000409946 EIF3BP55884 814 aaKnown RBP18.08■□□□□ 0.48
LRPPRC-203ENST00000409946 DNAJC21Q5F1R6 531 aaKnown RBP18.08■□□□□ 0.48
LRPPRC-203ENST00000409946 CAPN12Q6ZSI9 719 aa18.08■□□□□ 0.48
LRPPRC-203ENST00000409946 RELL1Q8IUW5 271 aa18.08■□□□□ 0.48
LRPPRC-203ENST00000409946 ZBED8Q8IZ13 594 aa18.08■□□□□ 0.48
LRPPRC-203ENST00000409946 WDR83Q9BRX9 315 aaKnown RBP18.08■□□□□ 0.48
LRPPRC-203ENST00000409946 ZBED2Q9BTP6 218 aa18.08■□□□□ 0.48
LRPPRC-203ENST00000409946 COMMD8Q9NX08 183 aa18.08■□□□□ 0.48
LRPPRC-203ENST00000409946 SLC12A8A0AV02 714 aa18.07■□□□□ 0.48
LRPPRC-203ENST00000409946 TLDC2A0PJX2 215 aa18.07■□□□□ 0.48
LRPPRC-203ENST00000409946 C5orf60A6NFR6 353 aa18.07■□□□□ 0.48
LRPPRC-203ENST00000409946 NDC80O14777 642 aa18.07■□□□□ 0.48
LRPPRC-203ENST00000409946 TLR5O60602 858 aa18.07■□□□□ 0.48
LRPPRC-203ENST00000409946 HMGA1P17096 107 aaKnown RBP18.07■□□□□ 0.48
LRPPRC-203ENST00000409946 NR1D1P20393 614 aa18.07■□□□□ 0.48
LRPPRC-203ENST00000409946 SLCO1A2P46721 670 aa18.07■□□□□ 0.48
LRPPRC-203ENST00000409946 GNGT1P63211 74 aa18.07■□□□□ 0.48
LRPPRC-203ENST00000409946 HTRA4P83105 476 aaPredicted RBP18.07■□□□□ 0.48
LRPPRC-203ENST00000409946 ANKRD20A2Q5SQ80 823 aa18.07■□□□□ 0.48
LRPPRC-203ENST00000409946 TMEM240Q5SV17 173 aa18.07■□□□□ 0.48
LRPPRC-203ENST00000409946 ANKRD20A1Q5TYW2 823 aa18.07■□□□□ 0.48
LRPPRC-203ENST00000409946 ANKRD20A3Q5VUR7 823 aa18.07■□□□□ 0.48
LRPPRC-203ENST00000409946 CENPUQ71F23 418 aa18.07■□□□□ 0.48
LRPPRC-203ENST00000409946 FIBCD1Q8N539 461 aa18.07■□□□□ 0.48
LRPPRC-203ENST00000409946 TBC1D31Q96DN5 1066 aa18.07■□□□□ 0.48
LRPPRC-203ENST00000409946 UBE2OQ9C0C9 1292 aaKnown RBP18.07■□□□□ 0.48
LRPPRC-203ENST00000409946 KLC2Q9H0B6 622 aa18.07■□□□□ 0.48
LRPPRC-203ENST00000409946 OLA1Q9NTK5 396 aaKnown RBP18.07■□□□□ 0.48
LRPPRC-203ENST00000409946 MPP6Q9NZW5 540 aa18.07■□□□□ 0.48
LRPPRC-203ENST00000409946 PCDHB12Q9Y5F1 795 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms