RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 FOXK2Q01167 660 aa18.35■□□□□ 0.53
LSM5-204ENST00000409909 MYL5Q02045 173 aa18.35■□□□□ 0.53
LSM5-204ENST00000409909 NCAPHQ15003 741 aa18.35■□□□□ 0.53
LSM5-204ENST00000409909 PTPRNQ16849 979 aa18.35■□□□□ 0.53
LSM5-204ENST00000409909 SPDYCQ5MJ68 293 aa18.35■□□□□ 0.53
LSM5-204ENST00000409909 RAP1GAP2Q684P5 730 aa18.35■□□□□ 0.53
LSM5-204ENST00000409909 MBLAC2Q68D91 279 aa18.35■□□□□ 0.53
LSM5-204ENST00000409909 KIAA1324Q6UXG2 1013 aaKnown RBP18.35■□□□□ 0.53
LSM5-204ENST00000409909 SLC26A9Q7LBE3 791 aa18.35■□□□□ 0.53
LSM5-204ENST00000409909 AHI1Q8N157 1196 aa18.35■□□□□ 0.53
LSM5-204ENST00000409909 DEFB119Q8N690 84 aa18.35■□□□□ 0.53
LSM5-204ENST00000409909 TMEM35BQ8NCS4 154 aa18.35■□□□□ 0.53
LSM5-204ENST00000409909 FIBINQ8TAL6 211 aa18.35■□□□□ 0.53
LSM5-204ENST00000409909 PIGKQ92643 395 aa18.35■□□□□ 0.53
LSM5-204ENST00000409909 BTN2A3PQ96KV6 586 aa18.35■□□□□ 0.53
LSM5-204ENST00000409909 TMEM245Q9H330 911 aa18.35■□□□□ 0.53
LSM5-204ENST00000409909 SYNCQ9H7C4 482 aa18.35■□□□□ 0.53
LSM5-204ENST00000409909 FAM204AQ9H8W3 233 aa18.35■□□□□ 0.53
LSM5-204ENST00000409909 TMEM74BQ9NUR3 256 aa18.35■□□□□ 0.53
LSM5-204ENST00000409909 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.35■□□□□ 0.53
LSM5-204ENST00000409909 DDIT4Q9NX09 232 aa18.35■□□□□ 0.53
LSM5-204ENST00000409909 LIMA1Q9UHB6 759 aaKnown RBP18.35■□□□□ 0.53
LSM5-204ENST00000409909 SIK3Q9Y2K2 1263 aa18.35■□□□□ 0.53
LSM5-204ENST00000409909 CEP83Q9Y592 693 aa18.35■□□□□ 0.53
LSM5-204ENST00000409909 MUC22E2RYF6 1773 aaPredicted RBP18.35■□□□□ 0.53
LSM5-204ENST00000409909 CNOT1A5YKK6 2376 aaKnown RBP18.34■□□□□ 0.53
LSM5-204ENST00000409909 SYNJ2BP-COX16A0A087WUM0 186 aa18.34■□□□□ 0.53
LSM5-204ENST00000409909 SYNCRIPO60506 623 aaKnown RBP18.34■□□□□ 0.53
LSM5-204ENST00000409909 ZNF217O75362 1048 aa18.34■□□□□ 0.53
LSM5-204ENST00000409909 EPHX1P07099 455 aa18.34■□□□□ 0.53
LSM5-204ENST00000409909 TACR2P21452 398 aa18.34■□□□□ 0.53
LSM5-204ENST00000409909 GABRB2P47870 512 aa18.34■□□□□ 0.53
LSM5-204ENST00000409909 COPB1P53618 953 aaKnown RBP18.34■□□□□ 0.53
LSM5-204ENST00000409909 COPAP53621 1224 aa18.34■□□□□ 0.53
LSM5-204ENST00000409909 SNX16P57768 344 aa18.34■□□□□ 0.53
LSM5-204ENST00000409909 POLR2FP61218 127 aaKnown RBP18.34■□□□□ 0.53
LSM5-204ENST00000409909 RPL6Q02878 288 aaKnown RBP18.34■□□□□ 0.53
LSM5-204ENST00000409909 ARID5AQ03989 594 aa18.34■□□□□ 0.53
LSM5-204ENST00000409909 LMAN2Q12907 356 aa18.34■□□□□ 0.53
LSM5-204ENST00000409909 E2F5Q15329 346 aa18.34■□□□□ 0.53
LSM5-204ENST00000409909 FSCBQ5H9T9 825 aa18.34■□□□□ 0.53
LSM5-204ENST00000409909 SERPINA13PQ6UXR4 307 aa18.34■□□□□ 0.53
LSM5-204ENST00000409909 SLC36A4Q6YBV0 504 aa18.34■□□□□ 0.53
LSM5-204ENST00000409909 MFN1Q8IWA4 741 aa18.34■□□□□ 0.53
LSM5-204ENST00000409909 LGI2Q8N0V4 545 aa18.34■□□□□ 0.53
LSM5-204ENST00000409909 ZNF397Q8NF99 534 aaPredicted RBP18.34■□□□□ 0.53
LSM5-204ENST00000409909 PRMT1Q99873 361 aaKnown RBP18.34■□□□□ 0.53
LSM5-204ENST00000409909 ADAM33Q9BZ11 813 aa18.34■□□□□ 0.53
LSM5-204ENST00000409909 PDCL3Q9H2J4 239 aa18.34■□□□□ 0.53
LSM5-204ENST00000409909 PRDM16Q9HAZ2 1276 aa18.34■□□□□ 0.53
LSM5-204ENST00000409909 FAM207AQ9NSI2 230 aaPredicted RBP18.34■□□□□ 0.53
LSM5-204ENST00000409909 COX16Q9P0S2 106 aa18.34■□□□□ 0.53
LSM5-204ENST00000409909 INTS6Q9UL03 887 aaKnown RBP18.34■□□□□ 0.53
LSM5-204ENST00000409909 PLA2G4CQ9UP65 541 aa18.34■□□□□ 0.53
LSM5-204ENST00000409909 MED19A0JLT2 244 aaPredicted RBP18.33■□□□□ 0.52
LSM5-204ENST00000409909 LRRC10BA6NIK2 292 aa18.33■□□□□ 0.52
LSM5-204ENST00000409909 DAB1O75553 588 aa18.33■□□□□ 0.52
LSM5-204ENST00000409909 MMEP08473 750 aa18.33■□□□□ 0.52
LSM5-204ENST00000409909 ZNF18P17022 549 aa18.33■□□□□ 0.52
LSM5-204ENST00000409909 ITPKAP23677 461 aa18.33■□□□□ 0.52
LSM5-204ENST00000409909 LIMK1P53667 647 aa18.33■□□□□ 0.52
LSM5-204ENST00000409909 JAM2P57087 298 aa18.33■□□□□ 0.52
LSM5-204ENST00000409909 FNDC3BQ53EP0 1204 aaKnown RBP18.33■□□□□ 0.52
LSM5-204ENST00000409909 FKBP15Q5T1M5 1219 aa18.33■□□□□ 0.52
LSM5-204ENST00000409909 STPG1Q5TH74 334 aa18.33■□□□□ 0.52
LSM5-204ENST00000409909 OTUD1Q5VV17 481 aaPredicted RBP18.33■□□□□ 0.52
LSM5-204ENST00000409909 MMS22LQ6ZRQ5 1243 aa18.33■□□□□ 0.52
LSM5-204ENST00000409909 APTXQ7Z2E3 356 aaKnown RBP18.33■□□□□ 0.52
LSM5-204ENST00000409909 METTL3Q86U44 580 aaKnown RBP18.33■□□□□ 0.52
LSM5-204ENST00000409909 TMPRSS6Q8IU80 811 aa18.33■□□□□ 0.52
LSM5-204ENST00000409909 ZDHHC17Q8IUH5 632 aa18.33■□□□□ 0.52
LSM5-204ENST00000409909 CARNMT1Q8N4J0 409 aa18.33■□□□□ 0.52
LSM5-204ENST00000409909 ZNF366Q8N895 744 aa18.33■□□□□ 0.52
LSM5-204ENST00000409909 EPS8L1Q8TE68 723 aa18.33■□□□□ 0.52
LSM5-204ENST00000409909 TTC17Q96AE7 1141 aa18.33■□□□□ 0.52
LSM5-204ENST00000409909 NOCTQ9UK39 431 aaKnown RBP18.33■□□□□ 0.52
LSM5-204ENST00000409909 PI4KAP42356 2102 aa18.32■□□□□ 0.52
LSM5-204ENST00000409909 LNP1A1A4G5 178 aa18.32■□□□□ 0.52
LSM5-204ENST00000409909 TM4SF5O14894 197 aa18.32■□□□□ 0.52
LSM5-204ENST00000409909 AP5Z1O43299 807 aa18.32■□□□□ 0.52
LSM5-204ENST00000409909 GFPT2O94808 682 aa18.32■□□□□ 0.52
LSM5-204ENST00000409909 LUC7L3O95232 432 aaKnown RBP18.32■□□□□ 0.52
LSM5-204ENST00000409909 TPM2P07951 284 aa18.32■□□□□ 0.52
LSM5-204ENST00000409909 DLDP09622 509 aaKnown RBP18.32■□□□□ 0.52
LSM5-204ENST00000409909 POLR2EP19388 210 aaKnown RBP18.32■□□□□ 0.52
LSM5-204ENST00000409909 TFE3P19532 575 aaPredicted RBP18.32■□□□□ 0.52
LSM5-204ENST00000409909 CCR1P32246 355 aa18.32■□□□□ 0.52
LSM5-204ENST00000409909 NOS2P35228 1153 aa18.32■□□□□ 0.52
LSM5-204ENST00000409909 IRX4P78413 519 aa18.32■□□□□ 0.52
LSM5-204ENST00000409909 TYRO3Q06418 890 aa18.32■□□□□ 0.52
LSM5-204ENST00000409909 NME3Q13232 169 aa18.32■□□□□ 0.52
LSM5-204ENST00000409909 CAMK2GQ13555 558 aaPredicted RBP18.32■□□□□ 0.52
LSM5-204ENST00000409909 SYCP1Q15431 976 aa18.32■□□□□ 0.52
LSM5-204ENST00000409909 C2CD6Q53TS8 623 aa18.32■□□□□ 0.52
LSM5-204ENST00000409909 LYSMD4Q5XG99 296 aa18.32■□□□□ 0.52
LSM5-204ENST00000409909 CHSY1Q86X52 802 aa18.32■□□□□ 0.52
LSM5-204ENST00000409909 ERICH1Q86X53 443 aa18.32■□□□□ 0.52
LSM5-204ENST00000409909 XYLT1Q86Y38 959 aa18.32■□□□□ 0.52
LSM5-204ENST00000409909 SYT12Q8IV01 421 aa18.32■□□□□ 0.52
LSM5-204ENST00000409909 SLC41A1Q8IVJ1 513 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms