RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 LRRC31Q6UY01 552 aa11.28□□□□□ -0.6
CHMP3-205ENST00000409810 TMC6Q7Z403 805 aa11.28□□□□□ -0.6
CHMP3-205ENST00000409810 BNIPLQ7Z465 357 aa11.28□□□□□ -0.6
CHMP3-205ENST00000409810 MAML2Q8IZL2 1156 aaPredicted RBP11.28□□□□□ -0.6
CHMP3-205ENST00000409810 CARNMT1Q8N4J0 409 aa11.28□□□□□ -0.6
CHMP3-205ENST00000409810 CAMKK1Q8N5S9 505 aa11.28□□□□□ -0.6
CHMP3-205ENST00000409810 JOSD2Q8TAC2 188 aa11.28□□□□□ -0.6
CHMP3-205ENST00000409810 ZNF653Q96CK0 615 aa11.28□□□□□ -0.6
CHMP3-205ENST00000409810 PRICKLE1Q96MT3 831 aaPredicted RBP11.28□□□□□ -0.6
CHMP3-205ENST00000409810 RPRD1AQ96P16 312 aaPredicted RBP11.28□□□□□ -0.6
CHMP3-205ENST00000409810 DNAJC7Q99615 494 aa11.28□□□□□ -0.6
CHMP3-205ENST00000409810 MRPL47Q9HD33 250 aaKnown RBP11.28□□□□□ -0.6
CHMP3-205ENST00000409810 ZSCAN32Q9NX65 697 aa11.28□□□□□ -0.6
CHMP3-205ENST00000409810 STIM2Q9P246 746 aa11.28□□□□□ -0.6
CHMP3-205ENST00000409810 ADAMTS1Q9UHI8 967 aa11.28□□□□□ -0.6
CHMP3-205ENST00000409810 XPO7Q9UIA9 1087 aaKnown RBP11.28□□□□□ -0.6
CHMP3-205ENST00000409810 MMP17Q9ULZ9 603 aa11.28□□□□□ -0.6
CHMP3-205ENST00000409810 PCDHGA2Q9Y5H1 932 aa11.28□□□□□ -0.6
CHMP3-205ENST00000409810 CKAP5Q14008 2032 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 A0A1B0GVM2 712 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 SSU72P8A0A1W2PR75 194 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 TCRBV5S1A1TA0A578 114 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 TCAF2A6NFQ2 919 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 PRRT4C9JH25 899 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 AKR1B15C9JRZ8 316 aaPredicted RBP11.27□□□□□ -0.61
CHMP3-205ENST00000409810 H0Y626 953 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 TRIM24O15164 1050 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 ZBTB24O43167 697 aaPredicted RBP11.27□□□□□ -0.61
CHMP3-205ENST00000409810 MFAP3LO75121 409 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 ALDH1A2O94788 518 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 ENDOD1O94919 500 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 GJB6O95452 261 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 KLF8O95600 359 aaPredicted RBP11.27□□□□□ -0.61
CHMP3-205ENST00000409810 ADCY5O95622 1261 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 PABPC1P11940 636 aaKnown RBP11.27□□□□□ -0.61
CHMP3-205ENST00000409810 TFE3P19532 575 aaPredicted RBP11.27□□□□□ -0.61
CHMP3-205ENST00000409810 HOXA6P31267 233 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 RFC1P35251 1148 aaPredicted RBP11.27□□□□□ -0.61
CHMP3-205ENST00000409810 SGSHP51688 502 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 ZNF143P52747 638 aaPredicted RBP11.27□□□□□ -0.61
CHMP3-205ENST00000409810 RPS24P62847 133 aaKnown RBP11.27□□□□□ -0.61
CHMP3-205ENST00000409810 MESP2Q0VG99 397 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 MAMLD1Q13495 774 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 AUHQ13825 339 aaKnown RBP11.27□□□□□ -0.61
CHMP3-205ENST00000409810 DMC1Q14565 340 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 ARID5BQ14865 1188 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 C15orf59Q2T9L4 293 aaPredicted RBP11.27□□□□□ -0.61
CHMP3-205ENST00000409810 CCDC14Q49A88 953 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 RNF43Q68DV7 783 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 PLEKHA7Q6IQ23 1121 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 PKN3Q6P5Z2 889 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 WDR59Q6PJI9 974 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 CHST9Q7L1S5 443 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 FAM131BQ86XD5 332 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 SFTPA1Q8IWL2 248 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 ALLCQ8N6M5 410 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.27□□□□□ -0.61
CHMP3-205ENST00000409810 IL17RCQ8NAC3 791 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 TXNDC5Q8NBS9 432 aaKnown RBP11.27□□□□□ -0.61
CHMP3-205ENST00000409810 TSTD1Q8NFU3 115 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 OLIG1Q8TAK6 271 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 FIBINQ8TAL6 211 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 FAM172AQ8WUF8 416 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 ATRIPQ8WXE1 791 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 MRFAP1L1Q96HT8 127 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 C1orf74Q96LT6 269 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 HAPLN3Q96S86 360 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 PPP1R9BQ96SB3 815 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 PRMT1Q99873 361 aaKnown RBP11.27□□□□□ -0.61
CHMP3-205ENST00000409810 SIK2Q9H0K1 926 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 ISCUQ9H1K1 167 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 SEMA4AQ9H3S1 761 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 POLMQ9NP87 494 aaPredicted RBP11.27□□□□□ -0.61
CHMP3-205ENST00000409810 ABHD10Q9NUJ1 306 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 ABCB8Q9NUT2 735 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 CALCOCO1Q9P1Z2 691 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 KIAA1522Q9P206 1035 aaPredicted RBP11.27□□□□□ -0.61
CHMP3-205ENST00000409810 CNOT8Q9UFF9 292 aaKnown RBP11.27□□□□□ -0.61
CHMP3-205ENST00000409810 GGA2Q9UJY4 613 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 VANGL2Q9ULK5 521 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 HS3ST4Q9Y661 456 aa11.27□□□□□ -0.61
CHMP3-205ENST00000409810 CCDC163A0A0D9SF12 145 aa11.26□□□□□ -0.61
CHMP3-205ENST00000409810 K7ESF4 209 aa11.26□□□□□ -0.61
CHMP3-205ENST00000409810 ATMINO43313 823 aaPredicted RBP11.26□□□□□ -0.61
CHMP3-205ENST00000409810 APBB3O95704 486 aa11.26□□□□□ -0.61
CHMP3-205ENST00000409810 ATP5BP06576 529 aaKnown RBP11.26□□□□□ -0.61
CHMP3-205ENST00000409810 PLEKP08567 350 aaPredicted RBP11.26□□□□□ -0.61
CHMP3-205ENST00000409810 HNRNPLP14866 589 aaKnown RBP eCLIP11.26□□□□□ -0.61
CHMP3-205ENST00000409810 PSMA2P25787 234 aa11.26□□□□□ -0.61
CHMP3-205ENST00000409810 HLA-FP30511 346 aa11.26□□□□□ -0.61
CHMP3-205ENST00000409810 NTSR1P30989 418 aa11.26□□□□□ -0.61
CHMP3-205ENST00000409810 DGKEP52429 567 aa11.26□□□□□ -0.61
CHMP3-205ENST00000409810 ATXN1P54253 815 aaKnown RBP11.26□□□□□ -0.61
CHMP3-205ENST00000409810 AIF1P55008 147 aa11.26□□□□□ -0.61
CHMP3-205ENST00000409810 RPL7AP62424 266 aaKnown RBP11.26□□□□□ -0.61
CHMP3-205ENST00000409810 MAPK8IP2Q13387 824 aaPredicted RBP11.26□□□□□ -0.61
CHMP3-205ENST00000409810 GEN1Q17RS7 908 aa11.26□□□□□ -0.61
CHMP3-205ENST00000409810 PPP1R15BQ5SWA1 713 aa11.26□□□□□ -0.61
CHMP3-205ENST00000409810 CCDC122Q5T0U0 273 aa11.26□□□□□ -0.61
CHMP3-205ENST00000409810 EGFLAMQ63HQ2 1017 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms