RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 SCARA5Q6ZMJ2 495 aa13.3□□□□□ -0.28
CHRNA1-205ENST00000409542 GPRIN1Q7Z2K8 1008 aa13.3□□□□□ -0.28
CHRNA1-205ENST00000409542 CTAGE6Q86UF2 777 aa13.3□□□□□ -0.28
CHRNA1-205ENST00000409542 TRIM59Q8IWR1 403 aa13.3□□□□□ -0.28
CHRNA1-205ENST00000409542 CTAGE4Q8IX94 777 aa13.3□□□□□ -0.28
CHRNA1-205ENST00000409542 NELFCDQ8IXH7 590 aa13.3□□□□□ -0.28
CHRNA1-205ENST00000409542 TXLNBQ8N3L3 684 aa13.3□□□□□ -0.28
CHRNA1-205ENST00000409542 SCFD1Q8WVM8 642 aa13.3□□□□□ -0.28
CHRNA1-205ENST00000409542 TOE1Q96GM8 510 aaKnown RBP13.3□□□□□ -0.28
CHRNA1-205ENST00000409542 CCDC42Q96M95 316 aa13.3□□□□□ -0.28
CHRNA1-205ENST00000409542 FAM124BQ9H5Z6 455 aaPredicted RBP13.3□□□□□ -0.28
CHRNA1-205ENST00000409542 MMRN2Q9H8L6 949 aa13.3□□□□□ -0.28
CHRNA1-205ENST00000409542 KIAA1586Q9HCI6 787 aa13.3□□□□□ -0.28
CHRNA1-205ENST00000409542 TOR4AQ9NXH8 423 aa13.3□□□□□ -0.28
CHRNA1-205ENST00000409542 WSB2Q9NYS7 404 aaPredicted RBP13.3□□□□□ -0.28
CHRNA1-205ENST00000409542 TRIM10Q9UDY6 481 aa13.3□□□□□ -0.28
CHRNA1-205ENST00000409542 HMGXB4Q9UGU5 601 aa13.3□□□□□ -0.28
CHRNA1-205ENST00000409542 NUDT5Q9UKK9 219 aa13.3□□□□□ -0.28
CHRNA1-205ENST00000409542 APC2O95996 2303 aa13.3□□□□□ -0.28
CHRNA1-205ENST00000409542 SSU72P8A0A1W2PR75 194 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 EPHB6O15197 1021 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 ZIC2O95409 532 aaPredicted RBP13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 CD6P30203 668 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 KIF5AQ12840 1032 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 TRPC3Q13507 836 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 BMT2Q1RMZ1 405 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 FUT11Q495W5 492 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 SYCP2LQ5T4T6 812 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 SDE2Q6IQ49 451 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 NUDT18Q6ZVK8 323 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 ACOT1Q86TX2 421 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 ZCCHC9Q8N567 271 aaKnown RBP13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 DNASE2BQ8WZ79 361 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 SMARCD1Q96GM5 515 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 XPO6Q96QU8 1125 aaKnown RBP13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 GPR174Q9BXC1 333 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 MKRN2Q9H000 416 aaKnown RBP13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 NACA2Q9H009 215 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 NMUR1Q9HB89 426 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 ARFGAP3Q9NP61 516 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 DMAP1Q9NPF5 467 aaPredicted RBP13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 KRT82Q9NSB4 513 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 FAM207AQ9NSI2 230 aaPredicted RBP13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 MARK1Q9P0L2 795 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 ARHGAP20Q9P2F6 1191 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 TRAF3IP3Q9Y228 551 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 SLCO1B1Q9Y6L6 691 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 STON1Q9Y6Q2 735 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 MYH10P35580 1976 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 RCCD1A6NED2 376 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 VNN1O95497 513 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 GNSP15586 552 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 DGKGP49619 791 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 MAP3K7CLP57077 242 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 CKAP4Q07065 602 aaKnown RBP13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 DMTNQ08495 405 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 KCNMA1Q12791 1236 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 GLRX5Q86SX6 157 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 BAHD1Q8TBE0 780 aaPredicted RBP13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 CRELD1Q96HD1 420 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 LRIG1Q96JA1 1093 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 LACRTQ9GZZ8 138 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 MIR1-1HGQ9H1L0 117 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 ANKZF1Q9H8Y5 726 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 CSNK1G1Q9HCP0 422 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 ITM2CQ9NQX7 267 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 COMMD8Q9NX08 183 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 USP36Q9P275 1121 aaKnown RBP13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 SUSD2Q9UGT4 822 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 FBXO10Q9UK96 956 aa13.29□□□□□ -0.28
CHRNA1-205ENST00000409542 ACACAQ13085 2346 aa13.28□□□□□ -0.28
CHRNA1-205ENST00000409542 A0A1B0GTW7 788 aa13.28□□□□□ -0.28
CHRNA1-205ENST00000409542 LRRC53A6NM62 1247 aa13.28□□□□□ -0.28
CHRNA1-205ENST00000409542 HHLA1C9JL84 531 aa13.28□□□□□ -0.28
CHRNA1-205ENST00000409542 CETN3O15182 167 aa13.28□□□□□ -0.28
CHRNA1-205ENST00000409542 EIF3DO15371 548 aaKnown RBP eCLIP13.28□□□□□ -0.28
CHRNA1-205ENST00000409542 PJA2O43164 708 aa13.28□□□□□ -0.28
CHRNA1-205ENST00000409542 ZBTB24O43167 697 aaPredicted RBP13.28□□□□□ -0.28
CHRNA1-205ENST00000409542 CYP26A1O43174 497 aa13.28□□□□□ -0.28
CHRNA1-205ENST00000409542 ATXN1LP0C7T5 689 aaKnown RBP13.28□□□□□ -0.28
CHRNA1-205ENST00000409542 NCAM1P13591 858 aa13.28□□□□□ -0.28
CHRNA1-205ENST00000409542 ATICP31939 592 aa13.28□□□□□ -0.28
CHRNA1-205ENST00000409542 EIF4A3P38919 411 aaKnown RBP13.28□□□□□ -0.28
CHRNA1-205ENST00000409542 IL12RB1P42701 662 aa13.28□□□□□ -0.28
CHRNA1-205ENST00000409542 KIF11P52732 1056 aa13.28□□□□□ -0.28
CHRNA1-205ENST00000409542 WDR45BQ5MNZ6 344 aa13.28□□□□□ -0.28
CHRNA1-205ENST00000409542 DCAF12L1Q5VU92 463 aa13.28□□□□□ -0.28
CHRNA1-205ENST00000409542 Q6ZNB5 142 aa13.28□□□□□ -0.28
CHRNA1-205ENST00000409542 STXBP4Q6ZWJ1 553 aa13.28□□□□□ -0.28
CHRNA1-205ENST00000409542 RRAGAQ7L523 313 aa13.28□□□□□ -0.28
CHRNA1-205ENST00000409542 C12orf29Q8N999 325 aa13.28□□□□□ -0.28
CHRNA1-205ENST00000409542 XXYLT1Q8NBI6 393 aa13.28□□□□□ -0.28
CHRNA1-205ENST00000409542 SLC2A14Q8TDB8 520 aa13.28□□□□□ -0.28
CHRNA1-205ENST00000409542 SETD7Q8WTS6 366 aaKnown RBP13.28□□□□□ -0.28
CHRNA1-205ENST00000409542 FOXJ1Q92949 421 aa13.28□□□□□ -0.28
CHRNA1-205ENST00000409542 GAREM1Q9H706 876 aa13.28□□□□□ -0.28
CHRNA1-205ENST00000409542 VRTNQ9H8Y1 702 aa13.28□□□□□ -0.28
CHRNA1-205ENST00000409542 WDR35Q9P2L0 1181 aa13.28□□□□□ -0.28
CHRNA1-205ENST00000409542 APOBEC2Q9Y235 224 aaKnown RBP13.28□□□□□ -0.28
CHRNA1-205ENST00000409542 FNDC3AQ9Y2H6 1198 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms