RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 HDDC3Q8N4P3 179 aa14.15□□□□□ -0.14
AFF3-202ENST00000409236 TMBIM4Q9HC24 238 aa14.15□□□□□ -0.14
AFF3-202ENST00000409236 DNAJC11Q9NVH1 559 aa14.15□□□□□ -0.14
AFF3-202ENST00000409236 GIT1Q9Y2X7 761 aa14.15□□□□□ -0.14
AFF3-202ENST00000409236 ABCB11O95342 1321 aa14.15□□□□□ -0.14
AFF3-202ENST00000409236 CES2O00748 559 aa14.15□□□□□ -0.15
AFF3-202ENST00000409236 COPZ1P61923 177 aa14.15□□□□□ -0.15
AFF3-202ENST00000409236 RFX4Q33E94 735 aa14.15□□□□□ -0.15
AFF3-202ENST00000409236 EPS8L3Q8TE67 593 aaKnown RBP14.15□□□□□ -0.15
AFF3-202ENST00000409236 PDLIM2Q96JY6 352 aa14.15□□□□□ -0.15
AFF3-202ENST00000409236 SLC25A23Q9BV35 468 aa14.15□□□□□ -0.15
AFF3-202ENST00000409236 CDC25AP30304 524 aa14.14□□□□□ -0.15
AFF3-202ENST00000409236 FAM187BQ17R55 369 aa14.14□□□□□ -0.15
AFF3-202ENST00000409236 SFRP1Q8N474 314 aa14.14□□□□□ -0.15
AFF3-202ENST00000409236 BSDC1Q9NW68 430 aaPredicted RBP14.14□□□□□ -0.15
AFF3-202ENST00000409236 SAE1Q9UBE0 346 aaPredicted RBP14.14□□□□□ -0.15
AFF3-202ENST00000409236 CHST10O43529 356 aa14.14□□□□□ -0.15
AFF3-202ENST00000409236 IST1P53990 364 aa14.14□□□□□ -0.15
AFF3-202ENST00000409236 DDX39BQ13838 428 aaKnown RBP14.14□□□□□ -0.15
AFF3-202ENST00000409236 GRHL2Q6ISB3 625 aa14.14□□□□□ -0.15
AFF3-202ENST00000409236 CCDC86Q9H6F5 360 aaKnown RBP14.14□□□□□ -0.15
AFF3-202ENST00000409236 NCAM2O15394 837 aa14.14□□□□□ -0.15
AFF3-202ENST00000409236 CYP26A1O43174 497 aa14.14□□□□□ -0.15
AFF3-202ENST00000409236 ZNF37AP17032 561 aaPredicted RBP14.14□□□□□ -0.15
AFF3-202ENST00000409236 PCSK1P29120 753 aa14.14□□□□□ -0.15
AFF3-202ENST00000409236 NEK3P51956 506 aa14.14□□□□□ -0.15
AFF3-202ENST00000409236 HIPK1Q86Z02 1210 aa14.14□□□□□ -0.15
AFF3-202ENST00000409236 SLC35C2Q9NQQ7 365 aa14.14□□□□□ -0.15
AFF3-202ENST00000409236 IKZF3Q9UKT9 509 aa14.14□□□□□ -0.15
AFF3-202ENST00000409236 OR6A2O95222 327 aa14.14□□□□□ -0.15
AFF3-202ENST00000409236 UGT1A5P35504 534 aa14.14□□□□□ -0.15
AFF3-202ENST00000409236 RAB15P59190 212 aa14.14□□□□□ -0.15
AFF3-202ENST00000409236 NAB1Q13506 487 aa14.14□□□□□ -0.15
AFF3-202ENST00000409236 RHEBQ15382 184 aa14.14□□□□□ -0.15
AFF3-202ENST00000409236 TNFAIP8L1Q8WVP5 186 aa14.14□□□□□ -0.15
AFF3-202ENST00000409236 CPA5Q8WXQ8 436 aa14.14□□□□□ -0.15
AFF3-202ENST00000409236 PSMD11O00231 422 aa14.14□□□□□ -0.15
AFF3-202ENST00000409236 PLA2G6O60733 806 aa14.14□□□□□ -0.15
AFF3-202ENST00000409236 CCNE2O96020 404 aa14.14□□□□□ -0.15
AFF3-202ENST00000409236 PCCAP05165 728 aaPredicted RBP14.14□□□□□ -0.15
AFF3-202ENST00000409236 MSL3P1P0C860 447 aa14.14□□□□□ -0.15
AFF3-202ENST00000409236 RPL9P32969 192 aaKnown RBP14.14□□□□□ -0.15
AFF3-202ENST00000409236 OVGP1Q12889 678 aa14.14□□□□□ -0.15
AFF3-202ENST00000409236 MTA1Q13330 715 aa14.14□□□□□ -0.15
AFF3-202ENST00000409236 PEX5LQ8IYB4 626 aa14.14□□□□□ -0.15
AFF3-202ENST00000409236 MAGEB10Q96LZ2 347 aaPredicted RBP14.14□□□□□ -0.15
AFF3-202ENST00000409236 CSPG5O95196 566 aa14.14□□□□□ -0.15
AFF3-202ENST00000409236 POU5F1Q01860 360 aaKnown RBP14.14□□□□□ -0.15
AFF3-202ENST00000409236 ANO7Q6IWH7 933 aa14.14□□□□□ -0.15
AFF3-202ENST00000409236 NR4A1P22736 598 aa14.14□□□□□ -0.15
AFF3-202ENST00000409236 PIK3CBP42338 1070 aa14.14□□□□□ -0.15
AFF3-202ENST00000409236 USP11P51784 963 aa14.14□□□□□ -0.15
AFF3-202ENST00000409236 PERM1Q5SV97 790 aa14.14□□□□□ -0.15
AFF3-202ENST00000409236 COA7Q96BR5 231 aa14.14□□□□□ -0.15
AFF3-202ENST00000409236 CDK5RAP1Q96SZ6 601 aaKnown RBP14.14□□□□□ -0.15
AFF3-202ENST00000409236 MTG1Q9BT17 334 aaPredicted RBP14.14□□□□□ -0.15
AFF3-202ENST00000409236 OR7A10O76100 309 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 GPD1P21695 349 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 TMEM179Q6ZVK1 233 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 KCTD17Q8N5Z5 321 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 PRCCQ92733 491 aaPredicted RBP14.13□□□□□ -0.15
AFF3-202ENST00000409236 SPEF1Q9Y4P9 236 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 SERPINF2P08697 491 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 GPR15P49685 360 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 IL18Q14116 193 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 MARCH7Q9H992 704 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 COPRSQ9NQ92 184 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 TRNAU1APQ9NX07 287 aaKnown RBP14.13□□□□□ -0.15
AFF3-202ENST00000409236 GMIPQ9P107 970 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 SH3BP1Q9Y3L3 701 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 CPSF4O95639 269 aaKnown RBP14.13□□□□□ -0.15
AFF3-202ENST00000409236 CRABP2P29373 138 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 SCN1BQ07699 218 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 TNK2Q07912 1038 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 PLCL1Q15111 1095 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 FAM126BQ8IXS8 530 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 S100PBPQ96BU1 408 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 RAB23Q9ULC3 237 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 PLEKHG2Q9H7P9 1386 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 CYP21A2P08686 494 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 ZNF12P17014 697 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 FNDC5Q8NAU1 212 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 BHLHE22Q8NFJ8 381 aaPredicted RBP14.13□□□□□ -0.15
AFF3-202ENST00000409236 CHURC1-FNTBB4DL54 471 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 SERPINE1P05121 402 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 CDK7P50613 346 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 ATP2C1P98194 919 aaPredicted RBP14.13□□□□□ -0.15
AFF3-202ENST00000409236 GRB14Q14449 540 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 PLCZ1Q86YW0 608 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 SLC25A41Q8N5S1 370 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 OR8H1Q8NGG4 311 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 RNPEPL1Q9HAU8 725 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 JPH1Q9HDC5 661 aaPredicted RBP14.13□□□□□ -0.15
AFF3-202ENST00000409236 INTS10Q9NVR2 710 aaKnown RBP14.13□□□□□ -0.15
AFF3-202ENST00000409236 ZNF232Q9UNY5 417 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 QRICH2Q9H0J4 1663 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 RARGP13631 454 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 NME5P56597 212 aa14.13□□□□□ -0.15
AFF3-202ENST00000409236 PDCD4Q53EL6 469 aaKnown RBP14.13□□□□□ -0.15
AFF3-202ENST00000409236 OR2W6PQ8NHA6 318 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms