RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 CXCR3P49682 368 aa18.57■□□□□ 0.56
PDLIM2-206ENST00000409141 PTP4A2Q12974 167 aa18.57■□□□□ 0.56
PDLIM2-206ENST00000409141 E2F5Q15329 346 aa18.57■□□□□ 0.56
PDLIM2-206ENST00000409141 TMEM215Q68D42 235 aa18.57■□□□□ 0.56
PDLIM2-206ENST00000409141 RNF43Q68DV7 783 aa18.57■□□□□ 0.56
PDLIM2-206ENST00000409141 CHST9Q7L1S5 443 aa18.57■□□□□ 0.56
PDLIM2-206ENST00000409141 EMC1Q8N766 993 aa18.57■□□□□ 0.56
PDLIM2-206ENST00000409141 FIBINQ8TAL6 211 aa18.57■□□□□ 0.56
PDLIM2-206ENST00000409141 WFIKKN2Q8TEU8 576 aa18.57■□□□□ 0.56
PDLIM2-206ENST00000409141 CFAP57Q96MR6 1250 aa18.57■□□□□ 0.56
PDLIM2-206ENST00000409141 ADAM33Q9BZ11 813 aa18.57■□□□□ 0.56
PDLIM2-206ENST00000409141 HAUS4Q9H6D7 363 aa18.57■□□□□ 0.56
PDLIM2-206ENST00000409141 TMEM51Q9NW97 253 aa18.57■□□□□ 0.56
PDLIM2-206ENST00000409141 CACNA2D2Q9NY47 1150 aa18.57■□□□□ 0.56
PDLIM2-206ENST00000409141 THAP10Q9P2Z0 257 aaPredicted RBP18.57■□□□□ 0.56
PDLIM2-206ENST00000409141 GGA2Q9UJY4 613 aa18.57■□□□□ 0.56
PDLIM2-206ENST00000409141 SMG5Q9UPR3 1016 aaKnown RBP18.57■□□□□ 0.56
PDLIM2-206ENST00000409141 PAXBP1Q9Y5B6 917 aa18.57■□□□□ 0.56
PDLIM2-206ENST00000409141 TCRBV21S2A2A0A5A6 115 aa18.56■□□□□ 0.56
PDLIM2-206ENST00000409141 WASH3PC4AMC7 463 aa18.56■□□□□ 0.56
PDLIM2-206ENST00000409141 NPC1O15118 1278 aa18.56■□□□□ 0.56
PDLIM2-206ENST00000409141 RPP40O75818 363 aaKnown RBP18.56■□□□□ 0.56
PDLIM2-206ENST00000409141 ADCY5O95622 1261 aa18.56■□□□□ 0.56
PDLIM2-206ENST00000409141 TPM3P06753 285 aa18.56■□□□□ 0.56
PDLIM2-206ENST00000409141 PABPC1P11940 636 aaKnown RBP18.56■□□□□ 0.56
PDLIM2-206ENST00000409141 PDGFRAP16234 1089 aa18.56■□□□□ 0.56
PDLIM2-206ENST00000409141 LPAL2Q16609 132 aa18.56■□□□□ 0.56
PDLIM2-206ENST00000409141 BRMS1LQ5PSV4 323 aa18.56■□□□□ 0.56
PDLIM2-206ENST00000409141 ACAD10Q6JQN1 1059 aa18.56■□□□□ 0.56
PDLIM2-206ENST00000409141 TRNP1Q6NT89 227 aa18.56■□□□□ 0.56
PDLIM2-206ENST00000409141 RASSF3Q86WH2 238 aa18.56■□□□□ 0.56
PDLIM2-206ENST00000409141 PGBD3Q8N328 593 aa18.56■□□□□ 0.56
PDLIM2-206ENST00000409141 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.56■□□□□ 0.56
PDLIM2-206ENST00000409141 WFDC5Q8TCV5 224 aa18.56■□□□□ 0.56
PDLIM2-206ENST00000409141 CPLX3Q8WVH0 158 aa18.56■□□□□ 0.56
PDLIM2-206ENST00000409141 HMGB4Q8WW32 186 aa18.56■□□□□ 0.56
PDLIM2-206ENST00000409141 GAB3Q8WWW8 586 aa18.56■□□□□ 0.56
PDLIM2-206ENST00000409141 SORCS1Q8WY21 1168 aa18.56■□□□□ 0.56
PDLIM2-206ENST00000409141 PRMT1Q99873 361 aaKnown RBP18.56■□□□□ 0.56
PDLIM2-206ENST00000409141 GABRG3Q99928 467 aa18.56■□□□□ 0.56
PDLIM2-206ENST00000409141 TPSD1Q9BZJ3 242 aa18.56■□□□□ 0.56
PDLIM2-206ENST00000409141 TKTL2Q9H0I9 626 aa18.56■□□□□ 0.56
PDLIM2-206ENST00000409141 BCCIPQ9P287 314 aaKnown RBP eCLIP18.56■□□□□ 0.56
PDLIM2-206ENST00000409141 STON1Q9Y6Q2 735 aa18.56■□□□□ 0.56
PDLIM2-206ENST00000409141 GPR179Q6PRD1 2367 aa18.56■□□□□ 0.56
PDLIM2-206ENST00000409141 EP300Q09472 2414 aaPredicted RBP18.55■□□□□ 0.56
PDLIM2-206ENST00000409141 H0Y626 953 aa18.55■□□□□ 0.56
PDLIM2-206ENST00000409141 ZBTB24O43167 697 aaPredicted RBP18.55■□□□□ 0.56
PDLIM2-206ENST00000409141 PAGE1O75459 146 aa18.55■□□□□ 0.56
PDLIM2-206ENST00000409141 GJB6O95452 261 aa18.55■□□□□ 0.56
PDLIM2-206ENST00000409141 KRT3P12035 628 aa18.55■□□□□ 0.56
PDLIM2-206ENST00000409141 CD70P32970 193 aa18.55■□□□□ 0.56
PDLIM2-206ENST00000409141 ATP11AP98196 1134 aa18.55■□□□□ 0.56
PDLIM2-206ENST00000409141 C1QBPQ07021 282 aaKnown RBP18.55■□□□□ 0.56
PDLIM2-206ENST00000409141 KLHL30Q0D2K2 578 aa18.55■□□□□ 0.56
PDLIM2-206ENST00000409141 CDH18Q13634 790 aa18.55■□□□□ 0.56
PDLIM2-206ENST00000409141 RABGAP1LQ5R372 815 aa18.55■□□□□ 0.56
PDLIM2-206ENST00000409141 E4F1Q66K89 784 aaPredicted RBP18.55■□□□□ 0.56
PDLIM2-206ENST00000409141 MON1BQ7L1V2 547 aa18.55■□□□□ 0.56
PDLIM2-206ENST00000409141 KIAA0907Q7Z7F0 614 aaPredicted RBP18.55■□□□□ 0.56
PDLIM2-206ENST00000409141 AHI1Q8N157 1196 aa18.55■□□□□ 0.56
PDLIM2-206ENST00000409141 RNF214Q8ND24 703 aa18.55■□□□□ 0.56
PDLIM2-206ENST00000409141 MDGA1Q8NFP4 955 aa18.55■□□□□ 0.56
PDLIM2-206ENST00000409141 JOSD2Q8TAC2 188 aa18.55■□□□□ 0.56
PDLIM2-206ENST00000409141 RXFP2Q8WXD0 754 aa18.55■□□□□ 0.56
PDLIM2-206ENST00000409141 ERLEC1Q96DZ1 483 aa18.55■□□□□ 0.56
PDLIM2-206ENST00000409141 HINFPQ9BQA5 517 aa18.55■□□□□ 0.56
PDLIM2-206ENST00000409141 SYT11Q9BT88 431 aa18.55■□□□□ 0.56
PDLIM2-206ENST00000409141 SELENOOQ9BVL4 669 aa18.55■□□□□ 0.56
PDLIM2-206ENST00000409141 XPO4Q9C0E2 1151 aaKnown RBP18.55■□□□□ 0.56
PDLIM2-206ENST00000409141 SIK2Q9H0K1 926 aa18.55■□□□□ 0.56
PDLIM2-206ENST00000409141 ARHGEF38Q9NXL2 777 aa18.55■□□□□ 0.56
PDLIM2-206ENST00000409141 PLA2G4CQ9UP65 541 aa18.55■□□□□ 0.56
PDLIM2-206ENST00000409141 HS3ST4Q9Y661 456 aa18.55■□□□□ 0.56
PDLIM2-206ENST00000409141 MYO15AQ9UKN7 3530 aa18.54■□□□□ 0.56
PDLIM2-206ENST00000409141 A0A1W2PQF6 199 aa18.54■□□□□ 0.56
PDLIM2-206ENST00000409141 A0A1W2PQJ5 194 aa18.54■□□□□ 0.56
PDLIM2-206ENST00000409141 LUC7L3O95232 432 aaKnown RBP18.54■□□□□ 0.56
PDLIM2-206ENST00000409141 SKILP12757 684 aa18.54■□□□□ 0.56
PDLIM2-206ENST00000409141 SDC4P31431 198 aa18.54■□□□□ 0.56
PDLIM2-206ENST00000409141 RDXP35241 583 aaKnown RBP18.54■□□□□ 0.56
PDLIM2-206ENST00000409141 PRKCIP41743 596 aa18.54■□□□□ 0.56
PDLIM2-206ENST00000409141 ATXN1P54253 815 aaKnown RBP18.54■□□□□ 0.56
PDLIM2-206ENST00000409141 GSCP56915 257 aaPredicted RBP18.54■□□□□ 0.56
PDLIM2-206ENST00000409141 AUHQ13825 339 aaKnown RBP18.54■□□□□ 0.56
PDLIM2-206ENST00000409141 USP39Q53GS9 565 aaKnown RBP18.54■□□□□ 0.56
PDLIM2-206ENST00000409141 FBXL22Q6P050 247 aa18.54■□□□□ 0.56
PDLIM2-206ENST00000409141 ZNF571Q7Z3V5 609 aaPredicted RBP18.54■□□□□ 0.56
PDLIM2-206ENST00000409141 ADIPOR2Q86V24 386 aa18.54■□□□□ 0.56
PDLIM2-206ENST00000409141 RUBCNQ92622 972 aa18.54■□□□□ 0.56
PDLIM2-206ENST00000409141 IQCDQ96DY2 449 aa18.54■□□□□ 0.56
PDLIM2-206ENST00000409141 RPRD1AQ96P16 312 aaPredicted RBP18.54■□□□□ 0.56
PDLIM2-206ENST00000409141 NCDNQ9UBB6 729 aa18.54■□□□□ 0.56
PDLIM2-206ENST00000409141 RAD54BQ9Y620 910 aa18.54■□□□□ 0.56
PDLIM2-206ENST00000409141 FAM186AA6NE01 2351 aa18.54■□□□□ 0.56
PDLIM2-206ENST00000409141 VPS13AQ96RL7 3174 aa18.54■□□□□ 0.56
PDLIM2-206ENST00000409141 DMDP11532 3685 aa18.53■□□□□ 0.56
PDLIM2-206ENST00000409141 C2CD4BA6NLJ0 364 aa18.53■□□□□ 0.56
PDLIM2-206ENST00000409141 TMCO5BA8MYB1 307 aa18.53■□□□□ 0.56
PDLIM2-206ENST00000409141 CBFA2T2O43439 604 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms