RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 COLGALT2Q8IYK4 626 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 ATP11CQ8NB49 1132 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 STKLD1Q8NE28 680 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 FBF1Q8TES7 1133 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 ZNF473Q8WTR7 871 aaKnown RBP4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 HTR3CQ8WXA8 447 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 PGLYRP2Q96PD5 576 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 PRMT1Q99873 361 aaKnown RBP4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 WDR83Q9BRX9 315 aaKnown RBP4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 COLEC11Q9BWP8 271 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 TKTL2Q9H0I9 626 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 SIK2Q9H0K1 926 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 UNC93B1Q9H1C4 597 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 PRDM12Q9H4Q4 367 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 KANSL3Q9P2N6 904 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 FBXW11Q9UKB1 542 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 NUDT5Q9UKK9 219 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 USP3Q9Y6I4 520 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 CASP8AP2Q9UKL3 1982 aa4.11□□□□□ -1.75
LRRTM4-201ENST00000409088 NT5C1B-RDH14C9J2C7 533 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 ANKRD65E5RJM6 399 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 E7ESA3 106 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 CHADO15335 359 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 PQBP1O60828 265 aaKnown RBP4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 FAM107AO95990 144 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 F9P00740 461 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 VAV1P15498 845 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 ATP2A2P16615 1042 aaKnown RBP4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 ERCC2P18074 760 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 PAX3P23760 479 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 GCAP28676 217 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 TPI1P60174 286 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 BFSP2Q13515 415 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 EFTUD2Q15029 972 aaKnown RBP eCLIP4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 MTFR1Q15390 333 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 DDR2Q16832 855 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 ANKRD20A2Q5SQ80 823 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 ANKRD20A1Q5TYW2 823 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 FAM171A1Q5VUB5 890 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 ANKRD20A3Q5VUR7 823 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 BTBD8Q5XKL5 378 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 PM20D1Q6GTS8 502 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 PPP1R21Q6ZMI0 780 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 RFX8Q6ZV50 586 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 BNIPLQ7Z465 357 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 CPLX4Q7Z7G2 160 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 TAC4Q86UU9 113 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 VPS52Q8N1B4 723 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 SNIP1Q8TAD8 396 aaKnown RBP4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 MAML1Q92585 1016 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 RTP4Q96DX8 246 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 CFAP36Q96G28 342 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 SCLYQ96I15 445 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 DEFB118Q96PH6 123 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 SLC9A7Q96T83 725 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 PKMYT1Q99640 499 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 FTHL17Q9BXU8 183 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 TMEM161AQ9NX61 479 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 RCOR3Q9P2K3 495 aaPredicted RBP4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 OR12D3Q9UGF7 316 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 LRFN2Q9ULH4 789 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 PHF24Q9UPV7 400 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 PCDHB7Q9Y5E2 793 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 THSD7BQ9C0I4 1608 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 C5orf60A6NFR6 353 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 INPPL1O15357 1258 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 SPAG7O75391 227 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 GCATO75600 419 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 DGKIO75912 1065 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 ALDH2P05091 517 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 VIMP08670 466 aaKnown RBP4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 SRGAP2BP0DMP2 458 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 EPHB2P29323 1055 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 GRIA1P42261 906 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 PGFP49763 221 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 CDK7P50613 346 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 SLC5A3P53794 718 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 CCL23P55773 120 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 GEMIN4P57678 1058 aaKnown RBP4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 MPP2Q14168 576 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 GPNMBQ14956 572 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 PKN2Q16513 984 aaKnown RBP4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 VSTM1Q6UX27 236 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 DENND5BQ6ZUT9 1274 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 TADA2BQ86TJ2 420 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 NPAS3Q8IXF0 933 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 FAM126BQ8IXS8 530 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 DCP1BQ8IZD4 617 aaKnown RBP4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 C4orf33Q8N1A6 199 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 RIBC1Q8N443 379 aaPredicted RBP4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 COLGALT1Q8NBJ5 622 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 GDAP1Q8TB36 358 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 DQX1Q8TE96 717 aaKnown RBP4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 ATXN2LQ8WWM7 1075 aaKnown RBP4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 IRGQQ8WZA9 623 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 NTAN1Q96AB6 310 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 CENPTQ96BT3 561 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 P2RY11Q96G91 374 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 B3GALT6Q96L58 329 aa4.1□□□□□ -1.75
LRRTM4-201ENST00000409088 QKIQ96PU8 341 aaKnown RBP eCLIP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms