RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 SPIRE1Q08AE8 756 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 CAMK2GQ13555 558 aaPredicted RBP13.25□□□□□ -0.29
RNF43-201ENST00000407977 INO80DQ53TQ3 878 aaPredicted RBP13.25□□□□□ -0.29
RNF43-201ENST00000407977 DGKKQ5KSL6 1271 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 ABRAXAS1Q6UWZ7 409 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.25□□□□□ -0.29
RNF43-201ENST00000407977 TMEM132CQ8N3T6 1108 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 LZTR1Q8N653 840 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 KIAA1683Q9H0B3 1180 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 CDH9Q9ULB4 789 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 IPPQ9Y573 584 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 UNC13AQ9UPW8 1703 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 ALKQ9UM73 1620 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 NCF1BA6NI72 391 aaPredicted RBP13.25□□□□□ -0.29
RNF43-201ENST00000407977 ERI2A8K979 691 aaKnown RBP13.25□□□□□ -0.29
RNF43-201ENST00000407977 NCF1CA8MVU1 366 aaPredicted RBP13.25□□□□□ -0.29
RNF43-201ENST00000407977 NCF1P14598 390 aaPredicted RBP13.25□□□□□ -0.29
RNF43-201ENST00000407977 HOXB6P17509 224 aaKnown RBP13.25□□□□□ -0.29
RNF43-201ENST00000407977 STAT5AP42229 794 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 RIPK1Q13546 671 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 ACOT1Q86TX2 421 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 PTCD3Q96EY7 689 aaKnown RBP13.25□□□□□ -0.29
RNF43-201ENST00000407977 AHSPQ9NZD4 102 aa13.25□□□□□ -0.29
RNF43-201ENST00000407977 GNG14A0A1W2PPG7 69 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 MYL12BO14950 172 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 NPM3O75607 178 aaKnown RBP13.24□□□□□ -0.29
RNF43-201ENST00000407977 CSPG5O95196 566 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 MRPS22P82650 360 aaKnown RBP13.24□□□□□ -0.29
RNF43-201ENST00000407977 NFIL3Q16649 462 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 TMC7Q7Z402 723 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 ULK2Q8IYT8 1036 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 ACMSDQ8TDX5 336 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 PYDC1Q8WXC3 89 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 ARMC7Q9H6L4 198 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 A1CFQ9NQ94 594 aaKnown RBP13.24□□□□□ -0.29
RNF43-201ENST00000407977 PNPLA3Q9NST1 481 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 GPATCH2LQ9NWQ4 482 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 NEXMIFQ5QGS0 1516 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 MADDQ8WXG6 1647 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 ALOX5P09917 674 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 SLC26A2P50443 739 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 C2CD6Q53TS8 623 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 ZCCHC8Q6NZY4 707 aaKnown RBP13.24□□□□□ -0.29
RNF43-201ENST00000407977 NECAB2Q7Z6G3 386 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 YAF2Q8IY57 180 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 BHLHE22Q8NFJ8 381 aaPredicted RBP13.24□□□□□ -0.29
RNF43-201ENST00000407977 SPPL2AQ8TCT8 520 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 QKIQ96PU8 341 aaKnown RBP eCLIP13.24□□□□□ -0.294e-9■■□□□ 13.2
RNF43-201ENST00000407977 ADAM28Q9UKQ2 775 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 GSTK1Q9Y2Q3 226 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 QRICH2Q9H0J4 1663 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 UBXN8O00124 270 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 RAD51BO15315 384 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 CHADO15335 359 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 CLTBP09497 229 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 OXCT1P55809 520 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 BNC1Q01954 994 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 CDH18Q13634 790 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 LRRC38Q5VT99 294 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 BRINP3Q76B58 766 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 EPHX4Q8IUS5 362 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 FNDC5Q8NAU1 212 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 ZNF606Q8WXB4 792 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 LENG1Q96BZ8 264 aaPredicted RBP13.24□□□□□ -0.29
RNF43-201ENST00000407977 OSBPL11Q9BXB4 747 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 EPB41L4BQ9H329 900 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 RERGLQ9H628 205 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 ZNRF3Q9ULT6 936 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 ANPEPP15144 967 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 WARSP23381 471 aaKnown RBP13.24□□□□□ -0.29
RNF43-201ENST00000407977 JAK1P23458 1154 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 IFNGR2P38484 337 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 TNK2Q07912 1038 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 ERAP2Q6P179 960 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 SEPT12Q8IYM1 358 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 KBTBD8Q8NFY9 601 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 RIOX1Q9H6W3 641 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 TAS2R13Q9NYV9 303 aa13.24□□□□□ -0.29
RNF43-201ENST00000407977 ZNF70Q9UC06 446 aaPredicted RBP13.24□□□□□ -0.29
RNF43-201ENST00000407977 SALL3Q9BXA9 1300 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 RPA3P35244 121 aaPredicted RBP13.23□□□□□ -0.29
RNF43-201ENST00000407977 KPNA1P52294 538 aaPredicted RBP13.23□□□□□ -0.29
RNF43-201ENST00000407977 TMEM119Q4V9L6 283 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 PRR5LQ6MZQ0 368 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 KIAA0408Q6ZU52 694 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 FAM131BQ86XD5 332 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 B3GALNT2Q8NCR0 500 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 ATXN10Q9UBB4 475 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 DSEQ9UL01 958 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 MAPRE3Q9UPY8 281 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 PTGES3LE9PB15 166 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 PSMD12O00232 456 aaPredicted RBP13.23□□□□□ -0.29
RNF43-201ENST00000407977 MAP3K6O95382 1288 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 SUPT20HL2P0C7V6 817 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 TCF7P36402 384 aaPredicted RBP13.23□□□□□ -0.29
RNF43-201ENST00000407977 SHROOM1Q2M3G4 852 aaPredicted RBP13.23□□□□□ -0.29
RNF43-201ENST00000407977 MFSD7Q6UXD7 560 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 UBASH3BQ8TF42 649 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 SPIRE2Q8WWL2 714 aa13.23□□□□□ -0.29
RNF43-201ENST00000407977 GMCL1Q96IK5 515 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms