RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 SLC6A3Q01959 620 aa15.46■□□□□ 0.07
ATG4B-206ENST00000405546 DCAF6Q58WW2 860 aa15.46■□□□□ 0.07
ATG4B-206ENST00000405546 C16orf46Q6P387 395 aa15.46■□□□□ 0.07
ATG4B-206ENST00000405546 ARHGAP18Q8N392 663 aa15.46■□□□□ 0.07
ATG4B-206ENST00000405546 DTNBP1Q96EV8 351 aa15.46■□□□□ 0.07
ATG4B-206ENST00000405546 SLC17A6Q9P2U8 582 aa15.46■□□□□ 0.07
ATG4B-206ENST00000405546 TTLL3Q9Y4R7 772 aa15.46■□□□□ 0.07
ATG4B-206ENST00000405546 MRPL42Q9Y6G3 142 aaKnown RBP15.46■□□□□ 0.07
ATG4B-206ENST00000405546 A0A0G2JLL6 359 aaPredicted RBP15.46■□□□□ 0.06
ATG4B-206ENST00000405546 CCDC78A2IDD5 438 aa15.46■□□□□ 0.06
ATG4B-206ENST00000405546 DYNC1LI2O43237 492 aaPredicted RBP15.46■□□□□ 0.06
ATG4B-206ENST00000405546 PAPSS1O43252 624 aaPredicted RBP15.46■□□□□ 0.06
ATG4B-206ENST00000405546 METTL18O95568 372 aa15.46■□□□□ 0.06
ATG4B-206ENST00000405546 RABGGTBP53611 331 aa15.46■□□□□ 0.06
ATG4B-206ENST00000405546 YWHAZP63104 245 aaKnown RBP15.46■□□□□ 0.06
ATG4B-206ENST00000405546 TTC39BQ5VTQ0 682 aaPredicted RBP15.46■□□□□ 0.06
ATG4B-206ENST00000405546 LCLAT1Q6UWP7 414 aa15.46■□□□□ 0.06
ATG4B-206ENST00000405546 PRRT2Q7Z6L0 340 aaPredicted RBP15.46■□□□□ 0.06
ATG4B-206ENST00000405546 MPP5Q8N3R9 675 aa15.46■□□□□ 0.06
ATG4B-206ENST00000405546 CDCA5Q96FF9 252 aa15.46■□□□□ 0.06
ATG4B-206ENST00000405546 LGMNQ99538 433 aa15.46■□□□□ 0.06
ATG4B-206ENST00000405546 EIF2AQ9BY44 585 aaKnown RBP15.46■□□□□ 0.06
ATG4B-206ENST00000405546 PPCSQ9HAB8 311 aa15.46■□□□□ 0.06
ATG4B-206ENST00000405546 ADARB2Q9NS39 739 aaKnown RBP15.46■□□□□ 0.06
ATG4B-206ENST00000405546 MFHAS1Q9Y4C4 1052 aa15.46■□□□□ 0.06
ATG4B-206ENST00000405546 C15orf38-AP3S2A0A0A6YYH1 394 aa15.45■□□□□ 0.06
ATG4B-206ENST00000405546 A0A0J9YVX5 310 aa15.45■□□□□ 0.06
ATG4B-206ENST00000405546 TM9SF1O15321 606 aa15.45■□□□□ 0.06
ATG4B-206ENST00000405546 SAT1P21673 171 aa15.45■□□□□ 0.06
ATG4B-206ENST00000405546 ACAT1P24752 427 aaKnown RBP15.45■□□□□ 0.06
ATG4B-206ENST00000405546 ARL4AP40617 200 aa15.45■□□□□ 0.06
ATG4B-206ENST00000405546 ACTR3P61158 418 aa15.45■□□□□ 0.06
ATG4B-206ENST00000405546 CYTH1Q15438 398 aa15.45■□□□□ 0.06
ATG4B-206ENST00000405546 GRIK4Q16099 956 aa15.45■□□□□ 0.06
ATG4B-206ENST00000405546 GSTA3Q16772 222 aa15.45■□□□□ 0.06
ATG4B-206ENST00000405546 VWA5B1Q5TIE3 1220 aa15.45■□□□□ 0.06
ATG4B-206ENST00000405546 TRIM67Q6ZTA4 783 aa15.45■□□□□ 0.06
ATG4B-206ENST00000405546 ARPINQ7Z6K5 226 aa15.45■□□□□ 0.06
ATG4B-206ENST00000405546 PRPF18Q99633 342 aaKnown RBP15.45■□□□□ 0.06
ATG4B-206ENST00000405546 MED10Q9BTT4 135 aa15.45■□□□□ 0.06
ATG4B-206ENST00000405546 FRMD8P1Q9BZ68 369 aaPredicted RBP15.45■□□□□ 0.06
ATG4B-206ENST00000405546 AP4E1Q9UPM8 1137 aa15.45■□□□□ 0.06
ATG4B-206ENST00000405546 TSPAN1O60635 241 aa15.45■□□□□ 0.06
ATG4B-206ENST00000405546 KRT38O76015 456 aa15.45■□□□□ 0.06
ATG4B-206ENST00000405546 F7P08709 466 aaPredicted RBP15.45■□□□□ 0.06
ATG4B-206ENST00000405546 NCF2P19878 526 aaPredicted RBP15.45■□□□□ 0.06
ATG4B-206ENST00000405546 LMO2P25791 158 aa15.45■□□□□ 0.06
ATG4B-206ENST00000405546 PMLP29590 882 aa15.45■□□□□ 0.06
ATG4B-206ENST00000405546 HIC1Q14526 733 aa15.45■□□□□ 0.06
ATG4B-206ENST00000405546 NADK2Q4G0N4 442 aa15.45■□□□□ 0.06
ATG4B-206ENST00000405546 DHDDSQ86SQ9 333 aa15.45■□□□□ 0.06
ATG4B-206ENST00000405546 SLC44A1Q8WWI5 657 aa15.45■□□□□ 0.06
ATG4B-206ENST00000405546 APOPT1Q96IL0 206 aa15.45■□□□□ 0.06
ATG4B-206ENST00000405546 OLFM3Q96PB7 478 aa15.45■□□□□ 0.06
ATG4B-206ENST00000405546 VPS11Q9H270 941 aa15.45■□□□□ 0.06
ATG4B-206ENST00000405546 TMPRSS4Q9NRS4 437 aa15.45■□□□□ 0.06
ATG4B-206ENST00000405546 ITGA11Q9UKX5 1188 aa15.45■□□□□ 0.06
ATG4B-206ENST00000405546 PIN4Q9Y237 131 aaKnown RBP15.45■□□□□ 0.06
ATG4B-206ENST00000405546 BUD23O43709 281 aaKnown RBP15.44■□□□□ 0.06
ATG4B-206ENST00000405546 TM7SF2O76062 418 aa15.44■□□□□ 0.06
ATG4B-206ENST00000405546 GNL1P36915 607 aaPredicted RBP15.44■□□□□ 0.06
ATG4B-206ENST00000405546 ADARP55265 1226 aaKnown RBP15.44■□□□□ 0.06
ATG4B-206ENST00000405546 ARHGAP1Q07960 439 aa15.44■□□□□ 0.06
ATG4B-206ENST00000405546 PRKD1Q15139 912 aaPredicted RBP15.44■□□□□ 0.06
ATG4B-206ENST00000405546 CCDC142Q17RM4 750 aa15.44■□□□□ 0.06
ATG4B-206ENST00000405546 PRAMEF19Q5SWL8 479 aa15.44■□□□□ 0.06
ATG4B-206ENST00000405546 ADAM32Q8TC27 787 aa15.44■□□□□ 0.06
ATG4B-206ENST00000405546 ZMAT2Q96NC0 199 aaKnown RBP15.44■□□□□ 0.06
ATG4B-206ENST00000405546 NXF3Q9H4D5 531 aaKnown RBP15.44■□□□□ 0.06
ATG4B-206ENST00000405546 NRDE2Q9H7Z3 1164 aa15.44■□□□□ 0.06
ATG4B-206ENST00000405546 USP29Q9HBJ7 922 aa15.44■□□□□ 0.06
ATG4B-206ENST00000405546 ZNF232Q9UNY5 417 aa15.44■□□□□ 0.06
ATG4B-206ENST00000405546 DOLKQ9UPQ8 538 aa15.44■□□□□ 0.06
ATG4B-206ENST00000405546 TEX264Q9Y6I9 313 aa15.44■□□□□ 0.06
ATG4B-206ENST00000405546 TFPTP0C1Z6 253 aa15.44■□□□□ 0.06
ATG4B-206ENST00000405546 CD1EP15812 388 aa15.44■□□□□ 0.06
ATG4B-206ENST00000405546 GOT1P17174 413 aa15.44■□□□□ 0.06
ATG4B-206ENST00000405546 FOLH1Q04609 750 aa15.44■□□□□ 0.06
ATG4B-206ENST00000405546 PDK1Q15118 436 aa15.44■□□□□ 0.06
ATG4B-206ENST00000405546 PDK2Q15119 407 aa15.44■□□□□ 0.06
ATG4B-206ENST00000405546 FASTKD5Q7L8L6 764 aaKnown RBP15.44■□□□□ 0.06
ATG4B-206ENST00000405546 TRIM42Q8IWZ5 723 aa15.44■□□□□ 0.06
ATG4B-206ENST00000405546 PQLC3Q8N755 202 aa15.44■□□□□ 0.06
ATG4B-206ENST00000405546 BEST2Q8NFU1 509 aa15.44■□□□□ 0.06
ATG4B-206ENST00000405546 SLC2A14Q8TDB8 520 aa15.44■□□□□ 0.06
ATG4B-206ENST00000405546 MROH8Q9H579 483 aa15.44■□□□□ 0.06
ATG4B-206ENST00000405546 CXCL11O14625 94 aa15.44■□□□□ 0.06
ATG4B-206ENST00000405546 CCR3P51677 355 aa15.44■□□□□ 0.06
ATG4B-206ENST00000405546 ZNF618Q5T7W0 954 aa15.44■□□□□ 0.06
ATG4B-206ENST00000405546 KLHDC10Q6PID8 442 aa15.44■□□□□ 0.06
ATG4B-206ENST00000405546 GPRC5AQ8NFJ5 357 aa15.44■□□□□ 0.06
ATG4B-206ENST00000405546 OR6J1Q8NGC5 347 aa15.44■□□□□ 0.06
ATG4B-206ENST00000405546 E2F7Q96AV8 911 aa15.44■□□□□ 0.06
ATG4B-206ENST00000405546 PGLYRP2Q96PD5 576 aa15.44■□□□□ 0.06
ATG4B-206ENST00000405546 CDHR5Q9HBB8 845 aa15.44■□□□□ 0.06
ATG4B-206ENST00000405546 S100A14Q9HCY8 104 aa15.44■□□□□ 0.06
ATG4B-206ENST00000405546 INPP5FQ9Y2H2 1132 aa15.44■□□□□ 0.06
ATG4B-206ENST00000405546 WDR27A2RRH5 827 aa15.43■□□□□ 0.06
ATG4B-206ENST00000405546 USP12O75317 370 aa15.43■□□□□ 0.06
ATG4B-206ENST00000405546 ZNF189O75820 626 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms