RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 TPI1P60174 286 aa21.7■■□□□ 1.06
TPM1-208ENST00000404484 C1orf228Q6PIY5 440 aa21.7■■□□□ 1.06
TPM1-208ENST00000404484 PDZD4Q76G19 769 aaPredicted RBP21.7■■□□□ 1.06
TPM1-208ENST00000404484 SLC22A17Q8WUG5 538 aa21.7■■□□□ 1.06
TPM1-208ENST00000404484 RSAD2Q8WXG1 361 aa21.7■■□□□ 1.06
TPM1-208ENST00000404484 TRMT2BQ96GJ1 504 aaKnown RBP21.7■■□□□ 1.06
TPM1-208ENST00000404484 SNF8Q96H20 258 aa21.7■■□□□ 1.06
TPM1-208ENST00000404484 MYRFLQ96LU7 910 aa21.7■■□□□ 1.06
TPM1-208ENST00000404484 ARHGEF4Q9NR80 690 aa21.7■■□□□ 1.06
TPM1-208ENST00000404484 ZNF446Q9NWS9 450 aa21.7■■□□□ 1.06
TPM1-208ENST00000404484 SAE1Q9UBE0 346 aaPredicted RBP21.7■■□□□ 1.06
TPM1-208ENST00000404484 UXTQ9UBK9 157 aaPredicted RBP21.7■■□□□ 1.06
TPM1-208ENST00000404484 SFMBT1Q9UHJ3 866 aa21.7■■□□□ 1.06
TPM1-208ENST00000404484 CD207Q9UJ71 328 aa21.7■■□□□ 1.06
TPM1-208ENST00000404484 SNX24Q9Y343 169 aa21.7■■□□□ 1.06
TPM1-208ENST00000404484 NEU2Q9Y3R4 380 aa21.7■■□□□ 1.06
TPM1-208ENST00000404484 SGK1O00141 431 aa21.7■■□□□ 1.06
TPM1-208ENST00000404484 STIP1P31948 543 aaKnown RBP21.7■■□□□ 1.06
TPM1-208ENST00000404484 RPL21P46778 160 aaKnown RBP21.7■■□□□ 1.06
TPM1-208ENST00000404484 PPP3CCP48454 512 aa21.7■■□□□ 1.06
TPM1-208ENST00000404484 CAV1Q03135 178 aa21.7■■□□□ 1.06
TPM1-208ENST00000404484 XRCC4Q13426 336 aa21.7■■□□□ 1.06
TPM1-208ENST00000404484 C10orf120Q5SQS8 335 aa21.7■■□□□ 1.06
TPM1-208ENST00000404484 ACBD5Q5T8D3 534 aaPredicted RBP21.7■■□□□ 1.06
TPM1-208ENST00000404484 SNX30Q5VWJ9 437 aa21.7■■□□□ 1.06
TPM1-208ENST00000404484 RFX8Q6ZV50 586 aa21.7■■□□□ 1.06
TPM1-208ENST00000404484 ITIH5Q86UX2 942 aa21.7■■□□□ 1.06
TPM1-208ENST00000404484 DDX42Q86XP3 938 aaKnown RBP eCLIP21.7■■□□□ 1.06
TPM1-208ENST00000404484 PCDH9Q9HC56 1237 aa21.7■■□□□ 1.06
TPM1-208ENST00000404484 MTRF1LQ9UGC7 380 aaKnown RBP21.7■■□□□ 1.06
TPM1-208ENST00000404484 HEY1Q9Y5J3 304 aa21.7■■□□□ 1.06
TPM1-208ENST00000404484 H7C0C1 242 aa21.69■■□□□ 1.06
TPM1-208ENST00000404484 APOEP02649 317 aa21.69■■□□□ 1.06
TPM1-208ENST00000404484 IL9P15248 144 aa21.69■■□□□ 1.06
TPM1-208ENST00000404484 EPCAMP16422 314 aa21.69■■□□□ 1.06
TPM1-208ENST00000404484 ITIH2P19823 946 aa21.69■■□□□ 1.06
TPM1-208ENST00000404484 ATP5OP48047 213 aa21.69■■□□□ 1.06
TPM1-208ENST00000404484 TBX4P57082 545 aa21.69■■□□□ 1.06
TPM1-208ENST00000404484 DPYSQ14117 519 aa21.69■■□□□ 1.06
TPM1-208ENST00000404484 TRADDQ15628 312 aa21.69■■□□□ 1.06
TPM1-208ENST00000404484 TRIP4Q15650 581 aaPredicted RBP21.69■■□□□ 1.06
TPM1-208ENST00000404484 PUS10Q3MIT2 529 aaKnown RBP21.69■■□□□ 1.06
TPM1-208ENST00000404484 ANKRD54Q6NXT1 300 aa21.69■■□□□ 1.06
TPM1-208ENST00000404484 DARS2Q6PI48 645 aaKnown RBP21.69■■□□□ 1.06
TPM1-208ENST00000404484 SYCE2Q6PIF2 218 aa21.69■■□□□ 1.06
TPM1-208ENST00000404484 CDKL3Q8IVW4 592 aaPredicted RBP21.69■■□□□ 1.06
TPM1-208ENST00000404484 ADAMTS19Q8TE59 1207 aa21.69■■□□□ 1.06
TPM1-208ENST00000404484 ZNF512Q96ME7 567 aaPredicted RBP21.69■■□□□ 1.06
TPM1-208ENST00000404484 TMPRSS4Q9NRS4 437 aa21.69■■□□□ 1.06
TPM1-208ENST00000404484 MARCH2Q9P0N8 246 aa21.69■■□□□ 1.06
TPM1-208ENST00000404484 OR12D3Q9UGF7 316 aa21.69■■□□□ 1.06
TPM1-208ENST00000404484 SLC12A6Q9UHW9 1150 aa21.69■■□□□ 1.06
TPM1-208ENST00000404484 INSL5Q9Y5Q6 135 aa21.69■■□□□ 1.06
TPM1-208ENST00000404484 RAD54BQ9Y620 910 aa21.69■■□□□ 1.06
TPM1-208ENST00000404484 MSI1O43347 362 aaKnown RBP21.68■■□□□ 1.06
TPM1-208ENST00000404484 TLR5O60602 858 aa21.68■■□□□ 1.06
TPM1-208ENST00000404484 AMPD1P23109 780 aa21.68■■□□□ 1.06
TPM1-208ENST00000404484 ECHS1P30084 290 aa21.68■■□□□ 1.06
TPM1-208ENST00000404484 ADCY8P40145 1251 aa21.68■■□□□ 1.06
TPM1-208ENST00000404484 CLCN4P51793 760 aa21.68■■□□□ 1.06
TPM1-208ENST00000404484 TWF1Q12792 350 aa21.68■■□□□ 1.06
TPM1-208ENST00000404484 EFEMP1Q12805 493 aa21.68■■□□□ 1.06
TPM1-208ENST00000404484 NCBP2-AS2Q69YL0 99 aa21.68■■□□□ 1.06
TPM1-208ENST00000404484 NPNTQ6UXI9 565 aa21.68■■□□□ 1.06
TPM1-208ENST00000404484 SMRP1Q8NCR6 262 aa21.68■■□□□ 1.06
TPM1-208ENST00000404484 LRRC45Q96CN5 670 aa21.68■■□□□ 1.06
TPM1-208ENST00000404484 SLC39A13Q96H72 371 aa21.68■■□□□ 1.06
TPM1-208ENST00000404484 NECAB3Q96P71 396 aaPredicted RBP21.68■■□□□ 1.06
TPM1-208ENST00000404484 FMO2Q99518 471 aa21.68■■□□□ 1.06
TPM1-208ENST00000404484 TMEM121Q9BTD3 319 aa21.68■■□□□ 1.06
TPM1-208ENST00000404484 ANLNQ9NQW6 1124 aa21.68■■□□□ 1.06
TPM1-208ENST00000404484 GRHL1Q9NZI5 618 aa21.68■■□□□ 1.06
TPM1-208ENST00000404484 TRPM5Q9NZQ8 1165 aa21.68■■□□□ 1.06
TPM1-208ENST00000404484 ASB3Q9Y575 518 aa21.68■■□□□ 1.06
TPM1-208ENST00000404484 MBTPS2O43462 519 aa21.67■■□□□ 1.06
TPM1-208ENST00000404484 SRGAP2BP0DMP2 458 aa21.67■■□□□ 1.06
TPM1-208ENST00000404484 HMGA1P17096 107 aaKnown RBP21.67■■□□□ 1.06
TPM1-208ENST00000404484 TUBP50607 506 aa21.67■■□□□ 1.06
TPM1-208ENST00000404484 PAFAH1B3Q15102 231 aaKnown RBP21.67■■□□□ 1.06
TPM1-208ENST00000404484 KLHDC10Q6PID8 442 aa21.67■■□□□ 1.06
TPM1-208ENST00000404484 CCDC149Q6ZUS6 474 aa21.67■■□□□ 1.06
TPM1-208ENST00000404484 FUT8Q9BYC5 575 aa21.67■■□□□ 1.06
TPM1-208ENST00000404484 MAGEB5Q9BZ81 275 aa21.67■■□□□ 1.06
TPM1-208ENST00000404484 S1PR5Q9H228 398 aa21.67■■□□□ 1.06
TPM1-208ENST00000404484 ACBD3Q9H3P7 528 aa21.67■■□□□ 1.06
TPM1-208ENST00000404484 NUDT5Q9UKK9 219 aa21.67■■□□□ 1.06
TPM1-208ENST00000404484 BCLAF3A2AJT9 711 aaKnown RBP21.66■■□□□ 1.06
TPM1-208ENST00000404484 KCNU1A8MYU2 1149 aa21.66■■□□□ 1.06
TPM1-208ENST00000404484 HACD1B0YJ81 288 aa21.66■■□□□ 1.06
TPM1-208ENST00000404484 I6L893 689 aaPredicted RBP21.66■■□□□ 1.06
TPM1-208ENST00000404484 PAGE1O75459 146 aa21.66■■□□□ 1.06
TPM1-208ENST00000404484 SERPINB6P35237 376 aa21.66■■□□□ 1.06
TPM1-208ENST00000404484 PLTPP55058 493 aa21.66■■□□□ 1.06
TPM1-208ENST00000404484 NRG1Q02297 640 aaPredicted RBP21.66■■□□□ 1.06
TPM1-208ENST00000404484 RING1Q06587 406 aa21.66■■□□□ 1.06
TPM1-208ENST00000404484 SMAD4Q13485 552 aaKnown RBP21.66■■□□□ 1.06
TPM1-208ENST00000404484 CASP8Q14790 479 aa21.66■■□□□ 1.06
TPM1-208ENST00000404484 HECTD3Q5T447 861 aa21.66■■□□□ 1.06
TPM1-208ENST00000404484 ATP6V0D2Q8N8Y2 350 aa21.66■■□□□ 1.06
TPM1-208ENST00000404484 ART4Q93070 314 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms