RNA–Protein interactions for RNA: ENST00000403946.7

OTOF-205, Transcript of otoferlin, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene OTOF, Length 6,937 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-205ENST00000403946 SOX11P35716 441 aa11.21□□□□□ -0.61
OTOF-205ENST00000403946 TLE2Q04725 743 aa11.21□□□□□ -0.61
OTOF-205ENST00000403946 LRRC49Q8IUZ0 686 aa11.21□□□□□ -0.61
OTOF-205ENST00000403946 C10orf53Q8N6V4 93 aa11.21□□□□□ -0.61
OTOF-205ENST00000403946 TMEM117Q9H0C3 514 aa11.21□□□□□ -0.61
OTOF-205ENST00000403946 HDHD2Q9H0R4 259 aa11.21□□□□□ -0.61
OTOF-205ENST00000403946 TAGLN3Q9UI15 199 aa11.21□□□□□ -0.61
OTOF-205ENST00000403946 COMMD3-BMI1R4GMX3 469 aa11.21□□□□□ -0.61
OTOF-205ENST00000403946 PHGDHO43175 533 aaKnown RBP11.21□□□□□ -0.61
OTOF-205ENST00000403946 GNRH1P01148 92 aa11.21□□□□□ -0.61
OTOF-205ENST00000403946 ZNF23P17027 643 aa11.21□□□□□ -0.61
OTOF-205ENST00000403946 ARPC4P59998 168 aa11.21□□□□□ -0.61
OTOF-205ENST00000403946 NT5DC3Q86UY8 548 aa11.21□□□□□ -0.61
OTOF-205ENST00000403946 RMND5BQ96G75 393 aaPredicted RBP11.21□□□□□ -0.61
OTOF-205ENST00000403946 CHP1Q99653 195 aa11.21□□□□□ -0.61
OTOF-205ENST00000403946 GTPBP2Q9BX10 602 aaKnown RBP11.21□□□□□ -0.61
OTOF-205ENST00000403946 C17orf75Q9HAS0 396 aa11.21□□□□□ -0.61
OTOF-205ENST00000403946 IL1RL2Q9HB29 575 aa11.21□□□□□ -0.61
OTOF-205ENST00000403946 SMARCAL1Q9NZC9 954 aa11.21□□□□□ -0.61
OTOF-205ENST00000403946 E2F8A0AVK6 867 aa11.21□□□□□ -0.61
OTOF-205ENST00000403946 SLC16A3O15427 465 aaKnown RBP11.21□□□□□ -0.61
OTOF-205ENST00000403946 CDC25CP30307 473 aa11.21□□□□□ -0.61
OTOF-205ENST00000403946 GRK3P35626 688 aa11.21□□□□□ -0.61
OTOF-205ENST00000403946 CPA6Q8N4T0 437 aa11.21□□□□□ -0.61
OTOF-205ENST00000403946 GPR152Q8TDT2 470 aa11.21□□□□□ -0.61
OTOF-205ENST00000403946 FOXP3Q9BZS1 431 aa11.21□□□□□ -0.61
OTOF-205ENST00000403946 PLGRKTQ9HBL7 147 aa11.21□□□□□ -0.61
OTOF-205ENST00000403946 ATP13A1Q9HD20 1204 aa11.21□□□□□ -0.61
OTOF-205ENST00000403946 GABRR2P28476 465 aa11.21□□□□□ -0.62
OTOF-205ENST00000403946 VEGFBP49765 207 aa11.21□□□□□ -0.62
OTOF-205ENST00000403946 GRIK5Q16478 980 aa11.21□□□□□ -0.62
OTOF-205ENST00000403946 DIS3LQ8TF46 1054 aaKnown RBP11.21□□□□□ -0.62
OTOF-205ENST00000403946 PPP1R16AQ96I34 528 aa11.21□□□□□ -0.62
OTOF-205ENST00000403946 PLEKHA8Q96JA3 519 aa11.21□□□□□ -0.62
OTOF-205ENST00000403946 PORCNQ9H237 461 aa11.21□□□□□ -0.62
OTOF-205ENST00000403946 LNPEPQ9UIQ6 1025 aa11.21□□□□□ -0.62
OTOF-205ENST00000403946 GAKO14976 1311 aa11.21□□□□□ -0.62
OTOF-205ENST00000403946 ADGRA2Q96PE1 1338 aa11.21□□□□□ -0.62
OTOF-205ENST00000403946 C5orf58C9J3I9 102 aa11.21□□□□□ -0.62
OTOF-205ENST00000403946 MED24O75448 989 aa11.21□□□□□ -0.62
OTOF-205ENST00000403946 PGM3O95394 542 aa11.21□□□□□ -0.62
OTOF-205ENST00000403946 DNTTP04053 509 aa11.21□□□□□ -0.62
OTOF-205ENST00000403946 CCDC130P13994 396 aa11.21□□□□□ -0.62
OTOF-205ENST00000403946 JAK1P23458 1154 aa11.21□□□□□ -0.62
OTOF-205ENST00000403946 BCAT1P54687 386 aa11.21□□□□□ -0.62
OTOF-205ENST00000403946 FMR1Q06787 632 aaKnown RBP eCLIP11.21□□□□□ -0.62
OTOF-205ENST00000403946 SLC29A2Q14542 456 aa11.21□□□□□ -0.62
OTOF-205ENST00000403946 GPR158Q5T848 1215 aa11.21□□□□□ -0.62
OTOF-205ENST00000403946 BNC2Q6ZN30 1099 aaPredicted RBP11.21□□□□□ -0.62
OTOF-205ENST00000403946 IKBIPQ70UQ0 350 aa11.21□□□□□ -0.62
OTOF-205ENST00000403946 CORO1CQ9ULV4 474 aaPredicted RBP11.21□□□□□ -0.62
OTOF-205ENST00000403946 PNMA8CA0A1B0GUJ8 204 aa11.21□□□□□ -0.62
OTOF-205ENST00000403946 TRDMT1O14717 391 aaKnown RBP11.21□□□□□ -0.62
OTOF-205ENST00000403946 FOXN1O15353 648 aa11.21□□□□□ -0.62
OTOF-205ENST00000403946 HALP42357 657 aa11.21□□□□□ -0.62
OTOF-205ENST00000403946 CASP4P49662 377 aa11.21□□□□□ -0.62
OTOF-205ENST00000403946 NRSN1Q8IZ57 195 aa11.21□□□□□ -0.62
OTOF-205ENST00000403946 RAD51BO15315 384 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 TNFRSF21O75509 655 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 APRTP07741 180 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 KCNMA1Q12791 1236 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 DDX39BQ13838 428 aaKnown RBP11.2□□□□□ -0.62
OTOF-205ENST00000403946 RETSATQ6NUM9 610 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 STK32AQ8WU08 396 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 CASKIN2Q8WXE0 1202 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 FAM136AQ96C01 138 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 IMPAD1Q9NX62 359 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 MYRFQ9Y2G1 1151 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 RHOBTB3O94955 611 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 APODP05090 189 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 MSH3P20585 1137 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 OR1E1P30953 314 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 SLC1A1P43005 524 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 DHPSP49366 369 aaPredicted RBP11.2□□□□□ -0.62
OTOF-205ENST00000403946 KCNK10P57789 538 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 ELF3P78545 371 aaPredicted RBP11.2□□□□□ -0.62
OTOF-205ENST00000403946 SMARCD1Q96GM5 515 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 C9orf72Q96LT7 481 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 TBC1D3DA0A087WVF3 549 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 TBC1D3IA0A087WXS9 549 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 TBC1D3EA0A087X179 549 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 TBC1D3KA0A087X1G2 549 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 TBC1D3FA6NER0 549 aaPredicted RBP11.2□□□□□ -0.62
OTOF-205ENST00000403946 TBC1D3LB9A6J9 549 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 RTN2O75298 545 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 GUCA1CO95843 209 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 TBC1D3HP0C7X1 549 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 KRT20P35900 424 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 MAGEA4P43358 317 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 GLUD2P49448 558 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 HPCAP84074 193 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 OVGP1Q12889 678 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 TRAF2Q12933 501 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 PDK1Q15118 436 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 TAB1Q15750 504 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 SDHAF4Q5VUM1 108 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 TBC1D3GQ6DHY5 549 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 TBC1D3CQ6IPX1 549 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 LAYNQ6UX15 382 aa11.2□□□□□ -0.62
OTOF-205ENST00000403946 CBWD2Q8IUF1 395 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms