RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 SLC35F6Q8N357 371 aa34.4■■■■□ 3.1
CSNK1E-204ENST00000403904 BRD9Q9H8M2 597 aa34.4■■■■□ 3.1
CSNK1E-204ENST00000403904 C19orf67A6NJJ6 358 aa34.39■■■■□ 3.1
CSNK1E-204ENST00000403904 CREB3O43889 395 aa34.39■■■■□ 3.1
CSNK1E-204ENST00000403904 SGSHP51688 502 aa34.39■■■■□ 3.1
CSNK1E-204ENST00000403904 DPYSL2Q16555 572 aa34.39■■■■□ 3.1
CSNK1E-204ENST00000403904 ACBD5Q5T8D3 534 aaPredicted RBP34.39■■■■□ 3.1
CSNK1E-204ENST00000403904 BHMTQ93088 406 aa34.39■■■■□ 3.1
CSNK1E-204ENST00000403904 PRICKLE1Q96MT3 831 aaPredicted RBP34.39■■■■□ 3.1
CSNK1E-204ENST00000403904 HPS4Q9NQG7 708 aa34.39■■■■□ 3.1
CSNK1E-204ENST00000403904 SPHK2Q9NRA0 654 aa34.39■■■■□ 3.1
CSNK1E-204ENST00000403904 PCDHA3Q9Y5H8 950 aa34.39■■■■□ 3.1
CSNK1E-204ENST00000403904 E9PAM4 449 aa34.38■■■■□ 3.09
CSNK1E-204ENST00000403904 GFRA2O00451 464 aa34.38■■■■□ 3.09
CSNK1E-204ENST00000403904 CTNNA2P26232 953 aa34.38■■■■□ 3.09
CSNK1E-204ENST00000403904 CDH6P55285 790 aa34.38■■■■□ 3.09
CSNK1E-204ENST00000403904 SEMA3BQ13214 749 aa34.38■■■■□ 3.09
CSNK1E-204ENST00000403904 ARTNQ5T4W7 220 aa34.38■■■■□ 3.09
CSNK1E-204ENST00000403904 MEI1Q5TIA1 1274 aa34.38■■■■□ 3.09
CSNK1E-204ENST00000403904 RHBDF2Q6PJF5 856 aa34.38■■■■□ 3.09
CSNK1E-204ENST00000403904 ZNF683Q8IZ20 524 aa34.38■■■■□ 3.09
CSNK1E-204ENST00000403904 KCTD6Q8NC69 237 aa34.38■■■■□ 3.09
CSNK1E-204ENST00000403904 RAPGEF5Q92565 580 aa34.38■■■■□ 3.09
CSNK1E-204ENST00000403904 IRF7Q92985 503 aa34.38■■■■□ 3.09
CSNK1E-204ENST00000403904 ATP2A3Q93084 1043 aa34.38■■■■□ 3.09
CSNK1E-204ENST00000403904 IGSF8Q969P0 613 aa34.38■■■■□ 3.09
CSNK1E-204ENST00000403904 P2RY11Q96G91 374 aa34.38■■■■□ 3.09
CSNK1E-204ENST00000403904 RPRD1AQ96P16 312 aaPredicted RBP34.38■■■■□ 3.09
CSNK1E-204ENST00000403904 SBDSQ9Y3A5 250 aaKnown RBP eCLIP34.38■■■■□ 3.09
CSNK1E-204ENST00000403904 CCDC66A2RUB6 948 aa34.37■■■■□ 3.09
CSNK1E-204ENST00000403904 LRIG2O94898 1065 aa34.37■■■■□ 3.09
CSNK1E-204ENST00000403904 CD48P09326 243 aa34.37■■■■□ 3.09
CSNK1E-204ENST00000403904 DNA2P51530 1060 aa34.37■■■■□ 3.09
CSNK1E-204ENST00000403904 NRG1Q02297 640 aaPredicted RBP34.37■■■■□ 3.09
CSNK1E-204ENST00000403904 LY6G5CQ5SRR4 150 aa34.37■■■■□ 3.09
CSNK1E-204ENST00000403904 LRRC31Q6UY01 552 aa34.37■■■■□ 3.09
CSNK1E-204ENST00000403904 CFAP52Q8N1V2 620 aa34.37■■■■□ 3.09
CSNK1E-204ENST00000403904 TMA16Q96EY4 203 aaKnown RBP34.37■■■■□ 3.09
CSNK1E-204ENST00000403904 HES6Q96HZ4 224 aa34.37■■■■□ 3.09
CSNK1E-204ENST00000403904 OTOL1A6NHN0 477 aaPredicted RBP34.36■■■■□ 3.09
CSNK1E-204ENST00000403904 PI4K2BG5E9Z4 385 aa34.36■■■■□ 3.09
CSNK1E-204ENST00000403904 NFATC1O95644 943 aa34.36■■■■□ 3.09
CSNK1E-204ENST00000403904 GNG11P61952 73 aa34.36■■■■□ 3.09
CSNK1E-204ENST00000403904 RPS24P62847 133 aaKnown RBP34.36■■■■□ 3.09
CSNK1E-204ENST00000403904 KRT81Q14533 505 aa34.36■■■■□ 3.09
CSNK1E-204ENST00000403904 DHCR24Q15392 516 aa34.36■■■■□ 3.09
CSNK1E-204ENST00000403904 EPAS1Q99814 870 aa34.36■■■■□ 3.09
CSNK1E-204ENST00000403904 PCDH18Q9HCL0 1135 aa34.36■■■■□ 3.09
CSNK1E-204ENST00000403904 DDX56Q9NY93 547 aaKnown RBP34.36■■■■□ 3.09
CSNK1E-204ENST00000403904 GTSE1Q9NYZ3 720 aa34.36■■■■□ 3.09
CSNK1E-204ENST00000403904 MIF4GDA9UHW6 222 aaKnown RBP34.36■■■■□ 3.09
CSNK1E-204ENST00000403904 ARNTLO00327 626 aa34.36■■■■□ 3.09
CSNK1E-204ENST00000403904 KRT1P04264 644 aa34.36■■■■□ 3.09
CSNK1E-204ENST00000403904 CYP17A1P05093 508 aa34.36■■■■□ 3.09
CSNK1E-204ENST00000403904 PEX5P50542 639 aa34.36■■■■□ 3.09
CSNK1E-204ENST00000403904 IRAK1P51617 712 aa34.36■■■■□ 3.09
CSNK1E-204ENST00000403904 ARSEP51690 589 aa34.36■■■■□ 3.09
CSNK1E-204ENST00000403904 MANEALQ5VSG8 457 aa34.36■■■■□ 3.09
CSNK1E-204ENST00000403904 TTC8Q8TAM2 541 aa34.36■■■■□ 3.09
CSNK1E-204ENST00000403904 DDI1Q8WTU0 396 aa34.36■■■■□ 3.09
CSNK1E-204ENST00000403904 ALG3Q92685 438 aa34.36■■■■□ 3.09
CSNK1E-204ENST00000403904 PLK2Q9NYY3 685 aa34.36■■■■□ 3.09
CSNK1E-204ENST00000403904 LRRD1A4D1F6 860 aa34.35■■■■□ 3.09
CSNK1E-204ENST00000403904 DDX3YO15523 660 aaKnown RBP34.35■■■■□ 3.09
CSNK1E-204ENST00000403904 GOT1P17174 413 aa34.35■■■■□ 3.09
CSNK1E-204ENST00000403904 TDGQ13569 410 aa34.35■■■■□ 3.09
CSNK1E-204ENST00000403904 RUNX3Q13761 415 aa34.35■■■■□ 3.09
CSNK1E-204ENST00000403904 ANO4Q32M45 955 aa34.35■■■■□ 3.09
CSNK1E-204ENST00000403904 RWDD4Q6NW29 188 aaKnown RBP34.35■■■■□ 3.09
CSNK1E-204ENST00000403904 CIR1Q86X95 450 aaPredicted RBP34.35■■■■□ 3.09
CSNK1E-204ENST00000403904 KATNAL2Q8IYT4 538 aa34.35■■■■□ 3.09
CSNK1E-204ENST00000403904 UBL4BQ8N7F7 174 aa34.35■■■■□ 3.09
CSNK1E-204ENST00000403904 ECT2Q9H8V3 914 aa34.35■■■■□ 3.09
CSNK1E-204ENST00000403904 CWC15Q9P013 229 aaKnown RBP34.35■■■■□ 3.09
CSNK1E-204ENST00000403904 DOCK4Q8N1I0 1966 aa34.35■■■■□ 3.09
CSNK1E-204ENST00000403904 TICRRQ7Z2Z1 1910 aa34.34■■■■□ 3.09
CSNK1E-204ENST00000403904 ENC1O14682 589 aa34.34■■■■□ 3.09
CSNK1E-204ENST00000403904 NARSO43776 548 aaKnown RBP34.34■■■■□ 3.09
CSNK1E-204ENST00000403904 KDELR1P24390 212 aa34.34■■■■□ 3.09
CSNK1E-204ENST00000403904 MPPE1Q53F39 396 aa34.34■■■■□ 3.09
CSNK1E-204ENST00000403904 ODF2Q5BJF6 829 aa34.34■■■■□ 3.09
CSNK1E-204ENST00000403904 RABGAP1LQ5R372 815 aa34.34■■■■□ 3.09
CSNK1E-204ENST00000403904 ZSCAN30Q86W11 494 aa34.34■■■■□ 3.09
CSNK1E-204ENST00000403904 FAM71BQ8TC56 605 aa34.34■■■■□ 3.09
CSNK1E-204ENST00000403904 RNF25Q96BH1 459 aaPredicted RBP34.34■■■■□ 3.09
CSNK1E-204ENST00000403904 BBS2Q9BXC9 721 aa34.34■■■■□ 3.09
CSNK1E-204ENST00000403904 CALN1Q9BXU9 219 aa34.34■■■■□ 3.09
CSNK1E-204ENST00000403904 MPP6Q9NZW5 540 aa34.34■■■■□ 3.09
CSNK1E-204ENST00000403904 IGLV3-10A0A075B6K4 115 aa34.33■■■■□ 3.09
CSNK1E-204ENST00000403904 EEF2KO00418 725 aaKnown RBP34.33■■■■□ 3.09
CSNK1E-204ENST00000403904 TBL1XO60907 577 aa34.33■■■■□ 3.09
CSNK1E-204ENST00000403904 CYBBP04839 570 aa34.33■■■■□ 3.09
CSNK1E-204ENST00000403904 MSNP26038 577 aaKnown RBP34.33■■■■□ 3.09
CSNK1E-204ENST00000403904 TPI1P60174 286 aa34.33■■■■□ 3.09
CSNK1E-204ENST00000403904 DPYSL3Q14195 570 aa34.33■■■■□ 3.09
CSNK1E-204ENST00000403904 PDK2Q15119 407 aa34.33■■■■□ 3.09
CSNK1E-204ENST00000403904 RPS6KA1Q15418 735 aa34.33■■■■□ 3.09
CSNK1E-204ENST00000403904 C5orf22Q49AR2 442 aa34.33■■■■□ 3.09
CSNK1E-204ENST00000403904 FYB2Q5VWT5 728 aa34.33■■■■□ 3.09
CSNK1E-204ENST00000403904 PHF6Q8IWS0 365 aaKnown RBP eCLIP34.33■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms