RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 RBM15Q96T37 977 aaKnown RBP eCLIP13.71□□□□□ -0.22
CEACAM1-206ENST00000403136 CCSER2Q9H7U1 834 aa13.71□□□□□ -0.22
CEACAM1-206ENST00000403136 DNAJC17Q9NVM6 304 aaKnown RBP13.71□□□□□ -0.22
CEACAM1-206ENST00000403136 XPO7Q9UIA9 1087 aaKnown RBP13.71□□□□□ -0.22
CEACAM1-206ENST00000403136 HS3ST4Q9Y661 456 aa13.71□□□□□ -0.22
CEACAM1-206ENST00000403136 SLC12A8A0AV02 714 aa13.7□□□□□ -0.22
CEACAM1-206ENST00000403136 ZNF840PA6NDX5 716 aa13.7□□□□□ -0.22
CEACAM1-206ENST00000403136 PRRG1O14668 218 aa13.7□□□□□ -0.22
CEACAM1-206ENST00000403136 PPP1R12AO14974 1030 aaPredicted RBP13.7□□□□□ -0.22
CEACAM1-206ENST00000403136 RIPK2O43353 540 aa13.7□□□□□ -0.22
CEACAM1-206ENST00000403136 TLL1O43897 1013 aa13.7□□□□□ -0.22
CEACAM1-206ENST00000403136 CXCL14O95715 111 aa13.7□□□□□ -0.22
CEACAM1-206ENST00000403136 APOEP02649 317 aa13.7□□□□□ -0.22
CEACAM1-206ENST00000403136 NUDT17P0C025 328 aa13.7□□□□□ -0.22
CEACAM1-206ENST00000403136 ATP2A2P16615 1042 aaKnown RBP13.7□□□□□ -0.22
CEACAM1-206ENST00000403136 HOXC13P31276 330 aa13.7□□□□□ -0.22
CEACAM1-206ENST00000403136 KPNA1P52294 538 aaPredicted RBP13.7□□□□□ -0.22
CEACAM1-206ENST00000403136 EIF3BP55884 814 aaKnown RBP13.7□□□□□ -0.22
CEACAM1-206ENST00000403136 BASP1P80723 227 aaKnown RBP13.7□□□□□ -0.22
CEACAM1-206ENST00000403136 AP1B1Q10567 949 aa13.7□□□□□ -0.22
CEACAM1-206ENST00000403136 PRKD1Q15139 912 aaPredicted RBP13.7□□□□□ -0.22
CEACAM1-206ENST00000403136 TAF12Q16514 161 aa13.7□□□□□ -0.22
CEACAM1-206ENST00000403136 CEP85LQ5SZL2 805 aa13.7□□□□□ -0.22
CEACAM1-206ENST00000403136 FAM182AQ5T1J6 154 aa13.7□□□□□ -0.22
CEACAM1-206ENST00000403136 ARTNQ5T4W7 220 aa13.7□□□□□ -0.22
CEACAM1-206ENST00000403136 MANEALQ5VSG8 457 aa13.7□□□□□ -0.22
CEACAM1-206ENST00000403136 ANKRD22Q5VYY1 191 aa13.7□□□□□ -0.22
CEACAM1-206ENST00000403136 DENND2CQ68D51 928 aa13.7□□□□□ -0.22
CEACAM1-206ENST00000403136 C14orf80Q86SX3 495 aa13.7□□□□□ -0.22
CEACAM1-206ENST00000403136 TP53INP2Q8IXH6 220 aa13.7□□□□□ -0.22
CEACAM1-206ENST00000403136 ATP6V0D2Q8N8Y2 350 aa13.7□□□□□ -0.22
CEACAM1-206ENST00000403136 CCNYQ8ND76 341 aa13.7□□□□□ -0.22
CEACAM1-206ENST00000403136 CCDC110Q8TBZ0 833 aa13.7□□□□□ -0.22
CEACAM1-206ENST00000403136 FERMT1Q9BQL6 677 aa13.7□□□□□ -0.22
CEACAM1-206ENST00000403136 BRD8Q9H0E9 1235 aa13.7□□□□□ -0.22
CEACAM1-206ENST00000403136 CDC42EP4Q9H3Q1 356 aaKnown RBP13.7□□□□□ -0.22
CEACAM1-206ENST00000403136 RAB6BQ9NRW1 208 aa13.7□□□□□ -0.22
CEACAM1-206ENST00000403136 PLXNA3P51805 1871 aa13.69□□□□□ -0.22
CEACAM1-206ENST00000403136 TCRBV7S3A2A0A539 114 aa13.69□□□□□ -0.22
CEACAM1-206ENST00000403136 TTC4O95801 387 aa13.69□□□□□ -0.22
CEACAM1-206ENST00000403136 IGLV3-27P01718 113 aa13.69□□□□□ -0.22
CEACAM1-206ENST00000403136 CNPP09543 421 aaKnown RBP13.69□□□□□ -0.22
CEACAM1-206ENST00000403136 VAV1P15498 845 aa13.69□□□□□ -0.22
CEACAM1-206ENST00000403136 MX2P20592 715 aa13.69□□□□□ -0.22
CEACAM1-206ENST00000403136 SERPINB6P35237 376 aa13.69□□□□□ -0.22
CEACAM1-206ENST00000403136 ATP5C1P36542 298 aaKnown RBP13.69□□□□□ -0.22
CEACAM1-206ENST00000403136 BMPR1AP36894 532 aa13.69□□□□□ -0.22
CEACAM1-206ENST00000403136 MAGEA4P43358 317 aa13.69□□□□□ -0.22
CEACAM1-206ENST00000403136 TUBP50607 506 aa13.69□□□□□ -0.22
CEACAM1-206ENST00000403136 RING1Q06587 406 aa13.69□□□□□ -0.22
CEACAM1-206ENST00000403136 TWF1Q12792 350 aa13.69□□□□□ -0.22
CEACAM1-206ENST00000403136 VEPH1Q14D04 833 aa13.69□□□□□ -0.22
CEACAM1-206ENST00000403136 KYNUQ16719 465 aa13.69□□□□□ -0.22
CEACAM1-206ENST00000403136 TMC7Q7Z402 723 aa13.69□□□□□ -0.22
CEACAM1-206ENST00000403136 DNAJB7Q7Z6W7 309 aaPredicted RBP13.69□□□□□ -0.22
CEACAM1-206ENST00000403136 TADA2BQ86TJ2 420 aa13.69□□□□□ -0.22
CEACAM1-206ENST00000403136 NPWQ8N729 165 aa13.69□□□□□ -0.22
CEACAM1-206ENST00000403136 TBC1D31Q96DN5 1066 aa13.69□□□□□ -0.22
CEACAM1-206ENST00000403136 P2RY11Q96G91 374 aa13.69□□□□□ -0.22
CEACAM1-206ENST00000403136 TRMT2BQ96GJ1 504 aaKnown RBP13.69□□□□□ -0.22
CEACAM1-206ENST00000403136 CATSPERBQ9H7T0 1116 aa13.69□□□□□ -0.22
CEACAM1-206ENST00000403136 TRPM5Q9NZQ8 1165 aa13.69□□□□□ -0.22
CEACAM1-206ENST00000403136 DNMT3LQ9UJW3 386 aa13.69□□□□□ -0.22
CEACAM1-206ENST00000403136 NEU3Q9UQ49 428 aa13.69□□□□□ -0.22
CEACAM1-206ENST00000403136 NR2E3Q9Y5X4 410 aa13.69□□□□□ -0.22
CEACAM1-206ENST00000403136 LCHNA4D1U4 455 aa13.68□□□□□ -0.22
CEACAM1-206ENST00000403136 GOLGA8KD6RF30 607 aa13.68□□□□□ -0.22
CEACAM1-206ENST00000403136 E9PAM4 449 aa13.68□□□□□ -0.22
CEACAM1-206ENST00000403136 ALOX15BO15296 676 aa13.68□□□□□ -0.22
CEACAM1-206ENST00000403136 POLR3GO15318 223 aaPredicted RBP13.68□□□□□ -0.22
CEACAM1-206ENST00000403136 CHADO15335 359 aa13.68□□□□□ -0.22
CEACAM1-206ENST00000403136 FGF10O15520 208 aaPredicted RBP13.68□□□□□ -0.22
CEACAM1-206ENST00000403136 RNF40O75150 1001 aa13.68□□□□□ -0.22
CEACAM1-206ENST00000403136 ZNF189O75820 626 aaPredicted RBP13.68□□□□□ -0.22
CEACAM1-206ENST00000403136 CA8P35219 290 aa13.68□□□□□ -0.22
CEACAM1-206ENST00000403136 EPHB3P54753 998 aa13.68□□□□□ -0.22
CEACAM1-206ENST00000403136 ZNF844Q08AG5 666 aa13.68□□□□□ -0.22
CEACAM1-206ENST00000403136 IFFO1Q0D2I5 559 aa13.68□□□□□ -0.22
CEACAM1-206ENST00000403136 HECTD3Q5T447 861 aa13.68□□□□□ -0.22
CEACAM1-206ENST00000403136 UBAP2Q5T6F2 1119 aaKnown RBP13.68□□□□□ -0.22
CEACAM1-206ENST00000403136 PIK3R6Q5UE93 754 aa13.68□□□□□ -0.22
CEACAM1-206ENST00000403136 CENPUQ71F23 418 aa13.68□□□□□ -0.22
CEACAM1-206ENST00000403136 ARL8AQ96BM9 186 aa13.68□□□□□ -0.22
CEACAM1-206ENST00000403136 BTN2A3PQ96KV6 586 aa13.68□□□□□ -0.22
CEACAM1-206ENST00000403136 KLC2Q9H0B6 622 aa13.68□□□□□ -0.22
CEACAM1-206ENST00000403136 ETNK1Q9HBU6 452 aa13.68□□□□□ -0.22
CEACAM1-206ENST00000403136 ZMYND8Q9ULU4 1186 aaPredicted RBP13.68□□□□□ -0.22
CEACAM1-206ENST00000403136 HBS1LQ9Y450 684 aaKnown RBP13.68□□□□□ -0.22
CEACAM1-206ENST00000403136 A0A0A0MRY4 1105 aa13.68□□□□□ -0.22
CEACAM1-206ENST00000403136 GOLGA8MH3BSY2 632 aa13.68□□□□□ -0.22
CEACAM1-206ENST00000403136 STK10O94804 968 aaKnown RBP13.68□□□□□ -0.22
CEACAM1-206ENST00000403136 METTL18O95568 372 aa13.68□□□□□ -0.22
CEACAM1-206ENST00000403136 SHBGP04278 402 aa13.68□□□□□ -0.22
CEACAM1-206ENST00000403136 HMBSP08397 361 aa13.68□□□□□ -0.22
CEACAM1-206ENST00000403136 SPATA31D3P0C874 917 aa13.68□□□□□ -0.22
CEACAM1-206ENST00000403136 PPP3CCP48454 512 aa13.68□□□□□ -0.22
CEACAM1-206ENST00000403136 GALNT2Q10471 571 aa13.68□□□□□ -0.22
CEACAM1-206ENST00000403136 MTA1Q13330 715 aa13.68□□□□□ -0.22
CEACAM1-206ENST00000403136 KCNJ11Q14654 390 aa13.68□□□□□ -0.22
CEACAM1-206ENST00000403136 MS4A13Q5J8X5 152 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms