RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 HSP90AA4PQ58FG1 418 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 PRAMEF14Q5SWL7 426 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 ERMARDQ5T6L9 678 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 GARNL3Q5VVW2 1013 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 RRAGBQ5VZM2 374 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 MIS18BP1Q6P0N0 1132 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 CNKSR3Q6P9H4 555 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 RHOUQ7L0Q8 258 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 GATAD2AQ86YP4 633 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 TRIM59Q8IWR1 403 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 CMTR1Q8N1G2 835 aaKnown RBP4.07□□□□□ -1.76
CLHC1-201ENST00000401408 CELF5Q8N6W0 485 aaKnown RBP4.07□□□□□ -1.76
CLHC1-201ENST00000401408 TDRD5Q8NAT2 981 aaKnown RBP4.07□□□□□ -1.76
CLHC1-201ENST00000401408 FBXO18Q8NFZ0 1043 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 FAM71BQ8TC56 605 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 URGCPQ8TCY9 931 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 STAMQ92783 540 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 HDAC10Q969S8 669 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 FAM162AQ96A26 154 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 LRRC39Q96DD0 335 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 SHISA4Q96DD7 197 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 MSANTD3Q96H12 275 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 CRAMP1Q96RY5 1269 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 EIF3CQ99613 913 aaKnown RBP4.07□□□□□ -1.76
CLHC1-201ENST00000401408 TSG101Q99816 390 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 THUMPD2Q9BTF0 503 aaKnown RBP4.07□□□□□ -1.76
CLHC1-201ENST00000401408 TRIM62Q9BVG3 475 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 GSX2Q9BZM3 304 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 MS4A5Q9H3V2 200 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 CCDC86Q9H6F5 360 aaKnown RBP4.07□□□□□ -1.76
CLHC1-201ENST00000401408 WDR26Q9H7D7 661 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 MLXIPQ9HAP2 919 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 BRF2Q9HAW0 419 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 SEC31BQ9NQW1 1179 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 CYP26B1Q9NR63 512 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 SOHLH2Q9NX45 425 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 B4GALT6Q9UBX8 382 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 SUSD2Q9UGT4 822 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 SNX6Q9UNH7 406 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 SCAF8Q9UPN6 1271 aaKnown RBP4.07□□□□□ -1.76
CLHC1-201ENST00000401408 SMG5Q9UPR3 1016 aaKnown RBP4.07□□□□□ -1.76
CLHC1-201ENST00000401408 RPH3AQ9Y2J0 694 aaPredicted RBP4.07□□□□□ -1.76
CLHC1-201ENST00000401408 COQ6Q9Y2Z9 468 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 NOC2LQ9Y3T9 749 aaKnown RBP4.07□□□□□ -1.76
CLHC1-201ENST00000401408 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.07□□□□□ -1.76
CLHC1-201ENST00000401408 FPGT-TNNI3KV9GXZ4 949 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 C5orf42Q9H799 3197 aa4.07□□□□□ -1.76
CLHC1-201ENST00000401408 COL2A1P02458 1487 aaPredicted RBP4.07□□□□□ -1.76
CLHC1-201ENST00000401408 IBTKQ9P2D0 1353 aaPredicted RBP4.06□□□□□ -1.76
CLHC1-201ENST00000401408 A0A1W2PQ09 198 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 DENND3A2RUS2 1198 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 PDE2AO00408 941 aaPredicted RBP4.06□□□□□ -1.76
CLHC1-201ENST00000401408 TRDMT1O14717 391 aaKnown RBP4.06□□□□□ -1.76
CLHC1-201ENST00000401408 WDR46O15213 610 aaKnown RBP4.06□□□□□ -1.76
CLHC1-201ENST00000401408 CASC3O15234 703 aaKnown RBP4.06□□□□□ -1.76
CLHC1-201ENST00000401408 TEX28O15482 410 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 RNMTO43148 476 aaKnown RBP4.06□□□□□ -1.76
CLHC1-201ENST00000401408 XYLBO75191 536 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 OR5F1O95221 314 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 HTR3BO95264 441 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 CHRNA1P02708 482 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 TXNP10599 105 aaKnown RBP4.06□□□□□ -1.76
CLHC1-201ENST00000401408 NCF1P14598 390 aaPredicted RBP4.06□□□□□ -1.76
CLHC1-201ENST00000401408 CHMLP26374 656 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 NUP62P37198 522 aaPredicted RBP4.06□□□□□ -1.76
CLHC1-201ENST00000401408 HTR2BP41595 481 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 AFF1P51825 1210 aaKnown RBP4.06□□□□□ -1.76
CLHC1-201ENST00000401408 PRRX1P54821 245 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 CASP9P55211 416 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 RAC3P60763 192 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 ABATP80404 500 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 SRSF2Q01130 221 aaKnown RBP4.06□□□□□ -1.76
CLHC1-201ENST00000401408 GUCY1A3Q02108 690 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 RPL6Q02878 288 aaKnown RBP4.06□□□□□ -1.76
CLHC1-201ENST00000401408 NPRL3Q12980 569 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 ITGA7Q13683 1181 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 GIT2Q14161 759 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 TBCCQ15814 346 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 CYP2A13Q16696 494 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 TYSND1Q2T9J0 566 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 SGO2Q562F6 1265 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 CEP78Q5JTW2 689 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 NCCRP1Q6ZVX7 275 aaPredicted RBP4.06□□□□□ -1.76
CLHC1-201ENST00000401408 ARMCX2Q7L311 632 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 RTN4RL1Q86UN2 441 aaPredicted RBP4.06□□□□□ -1.76
CLHC1-201ENST00000401408 SGMS1Q86VZ5 419 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 ERO1BQ86YB8 467 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 SYCP3Q8IZU3 236 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 RTL3Q8N8U3 475 aaKnown RBP4.06□□□□□ -1.76
CLHC1-201ENST00000401408 DNAJB8Q8NHS0 232 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 KLHDC4Q8TBB5 520 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 THRSPQ92748 146 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 VWCEQ96DN2 955 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 ATG4CQ96DT6 458 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 FER1L6-AS2Q96M78 137 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 RUFY1Q96T51 708 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 KCNJ15Q99712 375 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 TEX12Q9BXU0 123 aa4.06□□□□□ -1.76
CLHC1-201ENST00000401408 MRPL44Q9H9J2 332 aaKnown RBP4.06□□□□□ -1.76
CLHC1-201ENST00000401408 SEPSECSQ9HD40 501 aaKnown RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms