RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 RPA4Q13156 261 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 HABP2Q14520 560 aaPredicted RBP6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 BBS9Q3SYG4 887 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 NAA35Q5VZE5 725 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 OGFOD3Q6PK18 319 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 MAMDC2Q7Z304 686 aaPredicted RBP6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 PXKQ7Z7A4 578 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 BPHLQ86WA6 291 aaPredicted RBP6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 WDR49Q8IV35 697 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 NIPA2Q8N8Q9 360 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 IFI44Q8TCB0 444 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 STYXQ8WUJ0 223 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 TTC25Q96NG3 672 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 CNTNAP3BQ96NU0 1288 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 SAMD11Q96NU1 681 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 TBCDQ9BTW9 1192 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 CNTNAP3Q9BZ76 1288 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 GPR63Q9BZJ6 419 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 TMEM39BQ9GZU3 492 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 RIOX1Q9H6W3 641 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 CYP26B1Q9NR63 512 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 TMEM39AQ9NV64 488 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 GMIPQ9P107 970 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 AJAP1Q9UKB5 411 aaPredicted RBP6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 ADAMTSL1Q8N6G6 1762 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 MYH10P35580 1976 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 GPR89AB7ZAQ6 455 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 ZBTB5O15062 677 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 SPOPO43791 374 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 IL18RAPO95256 599 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 NUDT7P0C024 238 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 GPR89BP0CG08 455 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 PLCG2P16885 1265 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 NMT1P30419 496 aaKnown RBP6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 IDH3AP50213 366 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 OCRLQ01968 901 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 CAMK2DQ13557 499 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 SNX1Q13596 522 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 SPA17Q15506 151 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 UAP1L1Q3KQV9 507 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 ZNF805Q5CZA5 627 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 ATPAF1Q5TC12 328 aaPredicted RBP6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 DLK2Q6UY11 383 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 FBXW8Q8N3Y1 598 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 GPR161Q8N6U8 529 aaKnown RBP6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 C10orf53Q8N6V4 93 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 KHSRPQ92945 711 aaKnown RBP eCLIP6.44□□□□□ -1.385e-6■■■□□ 15.3
TRAPPC13-202ENST00000399438 ADAD1Q96M93 576 aaKnown RBP6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 HS6ST2Q96MM7 605 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 GAL3ST1Q99999 423 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 DDX50Q9BQ39 737 aaKnown RBP6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 FHDC1Q9C0D6 1143 aaPredicted RBP6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 BRF2Q9HAW0 419 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 KANSL3Q9P2N6 904 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 CAPN11Q9UMQ6 739 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 PSAT1Q9Y617 370 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 SAR1BQ9Y6B6 198 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 GOLGA6L9A6NEM1 432 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 SLC22A31A6NKX4 558 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 PRR5-ARHGAP8B1AHC4 643 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 PPIP5K2O43314 1243 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 RB1P06400 928 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 TRIM49P0CI25 452 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 TRIM49CP0CI26 452 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 CES1P23141 567 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 ITPKAP23677 461 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 ADSSP30520 456 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 CYP2J2P51589 502 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 HNRNPH2P55795 449 aaKnown RBP6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 EPS8Q12929 822 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 TCTE1Q5JU00 501 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 BEND6Q5SZJ8 279 aaPredicted RBP6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 DENND5AQ6IQ26 1287 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 LRRC55Q6ZSA7 311 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 PHLDB2Q86SQ0 1253 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 TMEM200AQ86VY9 491 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 CATSPER3Q86XQ3 398 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 GPR150Q8NGU9 434 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 IFT81Q8WYA0 676 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 PLEKHG4BQ96PX9 1271 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 SYNCQ9H7C4 482 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 ACP6Q9NPH0 428 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 OXSMQ9NWU1 459 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 ABI2Q9NYB9 513 aaPredicted RBP6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 TEKT2Q9UIF3 430 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 AURKCQ9UQB9 309 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 FER1L6Q2WGJ9 1857 aa6.44□□□□□ -1.38
TRAPPC13-202ENST00000399438 CCDC151A5D8V7 595 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 TLR2O60603 784 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 NR2F2P24468 414 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 TAGLN2P37802 199 aaKnown RBP6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 GP5P40197 560 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 MAGEA1P43355 309 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 MTNR1BP49286 362 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 TRA2BP62995 288 aaKnown RBP6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 AMPD2Q01433 879 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 YWHAHQ04917 246 aaPredicted RBP6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 KCNMA1Q12791 1236 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 TRAF1Q13077 416 aa6.43□□□□□ -1.38
TRAPPC13-202ENST00000399438 CASP8Q14790 479 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms