RNA–Protein interactions for RNA: ENST00000399429.7

COL28A1-201, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL28A1, Length 4,277 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-201ENST00000399429 SEC24AO95486 1093 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 GH2P01242 217 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 SPATA31C1P0DKV0 1188 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 GARTP22102 1010 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 PCSK6P29122 969 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 HADHBP55084 474 aaKnown RBP9.53□□□□□ -0.88
COL28A1-201ENST00000399429 GPX6P59796 221 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 SLC9A4Q6AI14 798 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 TAF2Q6P1X5 1199 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 SMIM5Q71RC9 77 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 SLCO6A1Q86UG4 719 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 STK32CQ86UX6 486 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 CDAN1Q8IWY9 1227 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 OR8H2Q8N162 312 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 CBR4Q8N4T8 237 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 ZNF606Q8WXB4 792 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 ELMO1Q92556 727 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 C9orf16Q9BUW7 83 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 IGSF9Q9P2J2 1179 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 EBF1Q9UH73 591 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 TBX20Q9UMR3 447 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 NWD1Q149M9 1564 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 CLDN25C9JDP6 229 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 NR5A2O00482 541 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 TRIM38O00635 465 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 NADKO95544 446 aaPredicted RBP9.53□□□□□ -0.88
COL28A1-201ENST00000399429 ACADVLP49748 655 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 NRLP54845 237 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 DNASE1L3Q13609 305 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 CCNIQ14094 377 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 FASTKQ14296 549 aaKnown RBP9.53□□□□□ -0.88
COL28A1-201ENST00000399429 DGUOKQ16854 277 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 PDZD4Q76G19 769 aaPredicted RBP9.53□□□□□ -0.88
COL28A1-201ENST00000399429 BBS5Q8N3I7 341 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 PHTF2Q8N3S3 785 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 SFRP1Q8N474 314 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 MARVELD2Q8N4S9 558 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 ANKLE1Q8NAG6 615 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 DCAF4Q8WV16 495 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 PSPC1Q8WXF1 523 aaKnown RBP9.53□□□□□ -0.88
COL28A1-201ENST00000399429 SLCO2A1Q92959 643 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 ZNF668Q96K58 619 aaPredicted RBP9.53□□□□□ -0.88
COL28A1-201ENST00000399429 CEP41Q9BYV8 373 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 RPAP3Q9H6T3 665 aaPredicted RBP9.53□□□□□ -0.88
COL28A1-201ENST00000399429 EGFL7Q9UHF1 273 aa9.53□□□□□ -0.88
COL28A1-201ENST00000399429 RUVBL2Q9Y230 463 aaKnown RBP9.53□□□□□ -0.88
COL28A1-201ENST00000399429 hCG_1818297A0A087WSY0 165 aa9.52□□□□□ -0.88
COL28A1-201ENST00000399429 TMEM150BA6NC51 233 aa9.52□□□□□ -0.88
COL28A1-201ENST00000399429 TRPC5OSA6NMA1 111 aa9.52□□□□□ -0.88
COL28A1-201ENST00000399429 E5RJQ4 531 aa9.52□□□□□ -0.88
COL28A1-201ENST00000399429 INO80B-WBP1J3KQ70 363 aa9.52□□□□□ -0.88
COL28A1-201ENST00000399429 UBDO15205 165 aa9.52□□□□□ -0.88
COL28A1-201ENST00000399429 GABBR2O75899 941 aa9.52□□□□□ -0.88
COL28A1-201ENST00000399429 CCNKO75909 580 aa9.52□□□□□ -0.88
COL28A1-201ENST00000399429 YAP1P46937 504 aaKnown RBP9.52□□□□□ -0.88
COL28A1-201ENST00000399429 IDH3AP50213 366 aa9.52□□□□□ -0.88
COL28A1-201ENST00000399429 ITKQ08881 620 aa9.52□□□□□ -0.88
COL28A1-201ENST00000399429 GK3PQ14409 553 aa9.52□□□□□ -0.88
COL28A1-201ENST00000399429 CYP2A13Q16696 494 aa9.52□□□□□ -0.88
COL28A1-201ENST00000399429 NIPAL1Q6NVV3 410 aa9.52□□□□□ -0.88
COL28A1-201ENST00000399429 KCTD8Q6ZWB6 473 aa9.52□□□□□ -0.88
COL28A1-201ENST00000399429 C1orf186Q6ZWK4 172 aa9.52□□□□□ -0.88
COL28A1-201ENST00000399429 GATAD2AQ86YP4 633 aa9.52□□□□□ -0.88
COL28A1-201ENST00000399429 RP9Q8TA86 221 aaKnown RBP9.52□□□□□ -0.88
COL28A1-201ENST00000399429 TRIM63Q969Q1 353 aa9.52□□□□□ -0.88
COL28A1-201ENST00000399429 ISOC1Q96CN7 298 aa9.52□□□□□ -0.88
COL28A1-201ENST00000399429 OXCT2Q9BYC2 517 aaPredicted RBP9.52□□□□□ -0.88
COL28A1-201ENST00000399429 INO80BQ9C086 356 aaPredicted RBP9.52□□□□□ -0.88
COL28A1-201ENST00000399429 PCDHAC1Q9H158 963 aa9.52□□□□□ -0.88
COL28A1-201ENST00000399429 A0A096LPK6 155 aa9.52□□□□□ -0.89
COL28A1-201ENST00000399429 SDR42E2A6NKP2 422 aa9.52□□□□□ -0.89
COL28A1-201ENST00000399429 TNPO2O14787 897 aaKnown RBP9.52□□□□□ -0.89
COL28A1-201ENST00000399429 VILLO15195 856 aa9.52□□□□□ -0.89
COL28A1-201ENST00000399429 ALOX5P09917 674 aa9.52□□□□□ -0.89
COL28A1-201ENST00000399429 ATP6V1B2P21281 511 aa9.52□□□□□ -0.89
COL28A1-201ENST00000399429 RBL1P28749 1068 aa9.52□□□□□ -0.89
COL28A1-201ENST00000399429 ANGEL2Q5VTE6 544 aaKnown RBP9.52□□□□□ -0.89
COL28A1-201ENST00000399429 IL23RQ5VWK5 629 aa9.52□□□□□ -0.89
COL28A1-201ENST00000399429 UGT2A3Q6UWM9 527 aa9.52□□□□□ -0.89
COL28A1-201ENST00000399429 KDELC2Q7Z4H8 507 aa9.52□□□□□ -0.89
COL28A1-201ENST00000399429 VPS39Q96JC1 886 aa9.52□□□□□ -0.89
COL28A1-201ENST00000399429 SACM1LQ9NTJ5 587 aa9.52□□□□□ -0.89
COL28A1-201ENST00000399429 TBC1D22BQ9NU19 505 aa9.52□□□□□ -0.89
COL28A1-201ENST00000399429 CDC14AQ9UNH5 594 aa9.52□□□□□ -0.89
COL28A1-201ENST00000399429 MYH7P12883 1935 aa9.52□□□□□ -0.89
COL28A1-201ENST00000399429 TBKBP1A7MCY6 615 aa9.52□□□□□ -0.89
COL28A1-201ENST00000399429 M0R2N6 131 aa9.52□□□□□ -0.89
COL28A1-201ENST00000399429 WDR47O94967 919 aa9.52□□□□□ -0.89
COL28A1-201ENST00000399429 TOP3BO95985 862 aaKnown RBP9.52□□□□□ -0.89
COL28A1-201ENST00000399429 AMHP03971 560 aa9.52□□□□□ -0.89
COL28A1-201ENST00000399429 CNTFP26441 200 aa9.52□□□□□ -0.89
COL28A1-201ENST00000399429 PHKA2P46019 1235 aa9.52□□□□□ -0.89
COL28A1-201ENST00000399429 IST1P53990 364 aa9.52□□□□□ -0.89
COL28A1-201ENST00000399429 C1QBPQ07021 282 aaKnown RBP9.52□□□□□ -0.89
COL28A1-201ENST00000399429 ZBED5Q49AG3 693 aa9.52□□□□□ -0.89
COL28A1-201ENST00000399429 MSS51Q4VC12 460 aa9.52□□□□□ -0.89
COL28A1-201ENST00000399429 OTUD5Q96G74 571 aa9.52□□□□□ -0.89
COL28A1-201ENST00000399429 RNF145Q96MT1 663 aa9.52□□□□□ -0.89
COL28A1-201ENST00000399429 TCF12Q99081 682 aa9.52□□□□□ -0.89
COL28A1-201ENST00000399429 HIPK3Q9H422 1215 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms