RNA–Protein interactions for RNA: ENST00000399100.6

SEC24B-202, Transcript of SEC24 homolog B, COPII coat complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEC24B, Length 3,780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24B-202ENST00000399100 SMIM28A0A1B0GU29 152 aa13.5□□□□□ -0.25
SEC24B-202ENST00000399100 WISP3O95389 354 aaPredicted RBP13.5□□□□□ -0.25
SEC24B-202ENST00000399100 HOXC13P31276 330 aa13.5□□□□□ -0.25
SEC24B-202ENST00000399100 TUBP50607 506 aa13.5□□□□□ -0.25
SEC24B-202ENST00000399100 ACTR3P61158 418 aa13.5□□□□□ -0.25
SEC24B-202ENST00000399100 PLCB3Q01970 1234 aa13.5□□□□□ -0.25
SEC24B-202ENST00000399100 AFMIDQ63HM1 303 aa13.5□□□□□ -0.25
SEC24B-202ENST00000399100 OR6B2Q6IFH4 312 aa13.5□□□□□ -0.25
SEC24B-202ENST00000399100 USP50Q70EL3 339 aaPredicted RBP13.5□□□□□ -0.25
SEC24B-202ENST00000399100 NET1Q7Z628 596 aaPredicted RBP13.5□□□□□ -0.25
SEC24B-202ENST00000399100 CEP57Q86XR8 500 aa13.5□□□□□ -0.25
SEC24B-202ENST00000399100 ZMIZ2Q8NF64 920 aa13.5□□□□□ -0.25
SEC24B-202ENST00000399100 KIF12Q96FN5 646 aa13.5□□□□□ -0.25
SEC24B-202ENST00000399100 APOL6Q9BWW8 343 aa13.5□□□□□ -0.25
SEC24B-202ENST00000399100 GCOM2Q9BZD3 368 aaPredicted RBP13.5□□□□□ -0.25
SEC24B-202ENST00000399100 CCNT2O60583 730 aaKnown RBP13.5□□□□□ -0.25
SEC24B-202ENST00000399100 TROVE2P10155 538 aaKnown RBP eCLIP13.5□□□□□ -0.25
SEC24B-202ENST00000399100 CCDC130P13994 396 aa13.5□□□□□ -0.25
SEC24B-202ENST00000399100 SDC4P31431 198 aa13.5□□□□□ -0.25
SEC24B-202ENST00000399100 RGS7P49802 495 aa13.5□□□□□ -0.25
SEC24B-202ENST00000399100 CNTN4Q8IWV2 1026 aa13.5□□□□□ -0.25
SEC24B-202ENST00000399100 AZIN2Q96A70 460 aa13.5□□□□□ -0.25
SEC24B-202ENST00000399100 NXF3Q9H4D5 531 aaKnown RBP13.5□□□□□ -0.25
SEC24B-202ENST00000399100 GPAMQ9HCL2 828 aa13.5□□□□□ -0.25
SEC24B-202ENST00000399100 NMRK1Q9NWW6 199 aa13.5□□□□□ -0.25
SEC24B-202ENST00000399100 CENPFP49454 3210 aa13.5□□□□□ -0.25
SEC24B-202ENST00000399100 STRNO43815 780 aa13.5□□□□□ -0.25
SEC24B-202ENST00000399100 HAUS5O94927 633 aa13.5□□□□□ -0.25
SEC24B-202ENST00000399100 PSMG1O95456 288 aa13.5□□□□□ -0.25
SEC24B-202ENST00000399100 ATP11AP98196 1134 aa13.5□□□□□ -0.25
SEC24B-202ENST00000399100 NSUN2Q08J23 767 aaKnown RBP eCLIP13.5□□□□□ -0.25
SEC24B-202ENST00000399100 MSLNQ13421 630 aaPredicted RBP13.5□□□□□ -0.25
SEC24B-202ENST00000399100 ITGA7Q13683 1181 aa13.5□□□□□ -0.25
SEC24B-202ENST00000399100 FAXCQ5TGI0 409 aa13.5□□□□□ -0.25
SEC24B-202ENST00000399100 TMCO4Q5TGY1 634 aa13.5□□□□□ -0.25
SEC24B-202ENST00000399100 FYB2Q5VWT5 728 aa13.5□□□□□ -0.25
SEC24B-202ENST00000399100 CCNJLQ8IV13 435 aa13.5□□□□□ -0.25
SEC24B-202ENST00000399100 FBXO41Q8TF61 875 aa13.5□□□□□ -0.25
SEC24B-202ENST00000399100 DUSP16Q9BY84 665 aa13.5□□□□□ -0.25
SEC24B-202ENST00000399100 RNF19AQ9NV58 838 aa13.5□□□□□ -0.25
SEC24B-202ENST00000399100 PIK3R2O00459 728 aa13.49□□□□□ -0.25
SEC24B-202ENST00000399100 OPHN1O60890 802 aa13.49□□□□□ -0.25
SEC24B-202ENST00000399100 PGAM1P18669 254 aa13.49□□□□□ -0.25
SEC24B-202ENST00000399100 ACADSBP45954 432 aa13.49□□□□□ -0.25
SEC24B-202ENST00000399100 PPIDQ08752 370 aaKnown RBP13.49□□□□□ -0.25
SEC24B-202ENST00000399100 AP1B1Q10567 949 aa13.49□□□□□ -0.25
SEC24B-202ENST00000399100 C11orf91Q3C1V1 193 aa13.49□□□□□ -0.25
SEC24B-202ENST00000399100 CCDC117Q8IWD4 279 aaPredicted RBP13.49□□□□□ -0.25
SEC24B-202ENST00000399100 TP53INP2Q8IXH6 220 aa13.49□□□□□ -0.25
SEC24B-202ENST00000399100 ZNF567Q8N184 647 aa13.49□□□□□ -0.25
SEC24B-202ENST00000399100 RBM15BQ8NDT2 890 aaKnown RBP13.49□□□□□ -0.25
SEC24B-202ENST00000399100 EBF4Q9BQW3 602 aa13.49□□□□□ -0.25
SEC24B-202ENST00000399100 THAP1Q9NVV9 213 aa13.49□□□□□ -0.25
SEC24B-202ENST00000399100 SLC17A6Q9P2U8 582 aa13.49□□□□□ -0.25
SEC24B-202ENST00000399100 STK38LQ9Y2H1 464 aa13.49□□□□□ -0.25
SEC24B-202ENST00000399100 MANEALQ5VSG8 457 aa13.49□□□□□ -0.25
SEC24B-202ENST00000399100 FOXB2Q5VYV0 432 aa13.49□□□□□ -0.25
SEC24B-202ENST00000399100 PM20D1Q6GTS8 502 aa13.49□□□□□ -0.25
SEC24B-202ENST00000399100 CLEC20AQ6ZU45 233 aa13.49□□□□□ -0.25
SEC24B-202ENST00000399100 E2F7Q96AV8 911 aa13.49□□□□□ -0.25
SEC24B-202ENST00000399100 P2RY11Q96G91 374 aa13.49□□□□□ -0.25
SEC24B-202ENST00000399100 MLPHQ9BV36 600 aaPredicted RBP13.49□□□□□ -0.25
SEC24B-202ENST00000399100 NR2E3Q9Y5X4 410 aa13.49□□□□□ -0.25
SEC24B-202ENST00000399100 FAM72CH0Y354 149 aa13.49□□□□□ -0.25
SEC24B-202ENST00000399100 KRT37O76014 449 aa13.49□□□□□ -0.25
SEC24B-202ENST00000399100 GLDCP23378 1020 aa13.49□□□□□ -0.25
SEC24B-202ENST00000399100 PAX7P23759 505 aa13.49□□□□□ -0.25
SEC24B-202ENST00000399100 CRABP2P29373 138 aa13.49□□□□□ -0.25
SEC24B-202ENST00000399100 RDXP35241 583 aaKnown RBP13.49□□□□□ -0.25
SEC24B-202ENST00000399100 TNK2Q07912 1038 aa13.49□□□□□ -0.25
SEC24B-202ENST00000399100 KPNB1Q14974 876 aaKnown RBP13.49□□□□□ -0.25
SEC24B-202ENST00000399100 SMAD1Q15797 465 aaKnown RBP13.49□□□□□ -0.25
SEC24B-202ENST00000399100 INTS6LQ5JSJ4 861 aaKnown RBP13.49□□□□□ -0.25
SEC24B-202ENST00000399100 FAM72AQ5TYM5 149 aa13.49□□□□□ -0.25
SEC24B-202ENST00000399100 FAM72DQ6L9T8 149 aa13.49□□□□□ -0.25
SEC24B-202ENST00000399100 FAM72BQ86X60 149 aa13.49□□□□□ -0.25
SEC24B-202ENST00000399100 TMPRSS6Q8IU80 811 aa13.49□□□□□ -0.25
SEC24B-202ENST00000399100 NPWQ8N729 165 aa13.49□□□□□ -0.25
SEC24B-202ENST00000399100 RTP3Q9BQQ7 232 aa13.49□□□□□ -0.25
SEC24B-202ENST00000399100 TMPRSS4Q9NRS4 437 aa13.49□□□□□ -0.25
SEC24B-202ENST00000399100 INHBAP08476 426 aa13.48□□□□□ -0.25
SEC24B-202ENST00000399100 CYP2B6P20813 491 aa13.48□□□□□ -0.25
SEC24B-202ENST00000399100 AMPD1P23109 780 aa13.48□□□□□ -0.25
SEC24B-202ENST00000399100 ANKRD23Q86SG2 305 aa13.48□□□□□ -0.25
SEC24B-202ENST00000399100 NPLOC4Q8TAT6 608 aa13.48□□□□□ -0.25
SEC24B-202ENST00000399100 DNAI2Q9GZS0 605 aa13.48□□□□□ -0.25
SEC24B-202ENST00000399100 XPNPEP3Q9NQH7 507 aa13.48□□□□□ -0.25
SEC24B-202ENST00000399100 PIGVQ9NUD9 493 aa13.48□□□□□ -0.25
SEC24B-202ENST00000399100 ADAM28Q9UKQ2 775 aa13.48□□□□□ -0.25
SEC24B-202ENST00000399100 NEBLO76041 1014 aa13.48□□□□□ -0.25
SEC24B-202ENST00000399100 ZNF865P0CJ78 1059 aaPredicted RBP13.48□□□□□ -0.25
SEC24B-202ENST00000399100 NEFHP12036 1026 aa13.48□□□□□ -0.25
SEC24B-202ENST00000399100 DNAJB1P25685 340 aa13.48□□□□□ -0.25
SEC24B-202ENST00000399100 CDC42EP1Q00587 391 aa13.48□□□□□ -0.25
SEC24B-202ENST00000399100 BMPR2Q13873 1038 aa13.48□□□□□ -0.25
SEC24B-202ENST00000399100 BEND5Q7L4P6 421 aa13.48□□□□□ -0.25
SEC24B-202ENST00000399100 TRIM42Q8IWZ5 723 aa13.48□□□□□ -0.25
SEC24B-202ENST00000399100 PAF1Q8N7H5 531 aa13.48□□□□□ -0.25
SEC24B-202ENST00000399100 TFB1MQ8WVM0 346 aaKnown RBP13.48□□□□□ -0.25
SEC24B-202ENST00000399100 TSGA13Q96PP4 275 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms