RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 CYB5D1Q6P9G0 228 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 FAM47EQ6ZV65 393 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 PRPF39Q86UA1 669 aaKnown RBP18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 ECHDC2Q86YB7 292 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 FITM2Q8N6M3 262 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 SERAC1Q96JX3 654 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 SUSD3Q96L08 255 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 DDIT4Q9NX09 232 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 PLLPQ9Y342 182 aa18.23■□□□□ 0.51
HLA-DQB1-204ENST00000399084 BIRC5O15392 142 aa18.22■□□□□ 0.51
HLA-DQB1-204ENST00000399084 MGRN1O60291 552 aa18.22■□□□□ 0.51
HLA-DQB1-204ENST00000399084 MAP3K6O95382 1288 aa18.22■□□□□ 0.51
HLA-DQB1-204ENST00000399084 PYGBP11216 843 aa18.22■□□□□ 0.51
HLA-DQB1-204ENST00000399084 CRHR1P34998 444 aa18.22■□□□□ 0.51
HLA-DQB1-204ENST00000399084 WASHC5Q12768 1159 aa18.22■□□□□ 0.51
HLA-DQB1-204ENST00000399084 KCNA10Q16322 511 aa18.22■□□□□ 0.51
HLA-DQB1-204ENST00000399084 BRMS1LQ5PSV4 323 aa18.22■□□□□ 0.51
HLA-DQB1-204ENST00000399084 ATG16L1Q676U5 607 aa18.22■□□□□ 0.51
HLA-DQB1-204ENST00000399084 C4orf50Q6ZRC1 276 aa18.22■□□□□ 0.51
HLA-DQB1-204ENST00000399084 DENND5BQ6ZUT9 1274 aa18.22■□□□□ 0.51
HLA-DQB1-204ENST00000399084 HFE2Q6ZVN8 426 aa18.22■□□□□ 0.51
HLA-DQB1-204ENST00000399084 REM2Q8IYK8 340 aaPredicted RBP18.22■□□□□ 0.51
HLA-DQB1-204ENST00000399084 C3orf58Q8NDZ4 430 aa18.22■□□□□ 0.51
HLA-DQB1-204ENST00000399084 NDRG1Q92597 394 aaKnown RBP18.22■□□□□ 0.51
HLA-DQB1-204ENST00000399084 LPPQ93052 612 aa18.22■□□□□ 0.51
HLA-DQB1-204ENST00000399084 PKMYT1Q99640 499 aa18.22■□□□□ 0.51
HLA-DQB1-204ENST00000399084 TRIM55Q9BYV6 548 aa18.22■□□□□ 0.51
HLA-DQB1-204ENST00000399084 PLAC1Q9HBJ0 212 aa18.22■□□□□ 0.51
HLA-DQB1-204ENST00000399084 COL4A4P53420 1690 aaPredicted RBP18.22■□□□□ 0.51
HLA-DQB1-204ENST00000399084 ATP5BP06576 529 aaKnown RBP18.21■□□□□ 0.51
HLA-DQB1-204ENST00000399084 POLBP06746 335 aa18.21■□□□□ 0.51
HLA-DQB1-204ENST00000399084 USP17L7P0C7H9 530 aa18.21■□□□□ 0.51
HLA-DQB1-204ENST00000399084 CD52P31358 61 aa18.21■□□□□ 0.51
HLA-DQB1-204ENST00000399084 CACNB2Q08289 660 aaPredicted RBP18.21■□□□□ 0.51
HLA-DQB1-204ENST00000399084 GALNT2Q10471 571 aa18.21■□□□□ 0.51
HLA-DQB1-204ENST00000399084 FAM133BQ5BKY9 247 aaKnown RBP18.21■□□□□ 0.51
HLA-DQB1-204ENST00000399084 SPANXN3Q5MJ09 141 aa18.21■□□□□ 0.51
HLA-DQB1-204ENST00000399084 ARMC3Q5W041 872 aa18.21■□□□□ 0.51
HLA-DQB1-204ENST00000399084 KYAT3Q6YP21 454 aaKnown RBP18.21■□□□□ 0.51
HLA-DQB1-204ENST00000399084 OTOAQ7RTW8 1153 aa18.21■□□□□ 0.51
HLA-DQB1-204ENST00000399084 PID1Q7Z2X4 250 aa18.21■□□□□ 0.51
HLA-DQB1-204ENST00000399084 PARP9Q8IXQ6 854 aa18.21■□□□□ 0.51
HLA-DQB1-204ENST00000399084 ZNF567Q8N184 647 aa18.21■□□□□ 0.51
HLA-DQB1-204ENST00000399084 LZTR1Q8N653 840 aa18.21■□□□□ 0.51
HLA-DQB1-204ENST00000399084 MYLPFQ96A32 169 aa18.21■□□□□ 0.51
HLA-DQB1-204ENST00000399084 SRPK1Q96SB4 655 aaKnown RBP18.21■□□□□ 0.51
HLA-DQB1-204ENST00000399084 KCNK16Q96T55 309 aa18.21■□□□□ 0.51
HLA-DQB1-204ENST00000399084 MAGEB5Q9BZ81 275 aa18.21■□□□□ 0.51
HLA-DQB1-204ENST00000399084 ECT2Q9H8V3 914 aa18.21■□□□□ 0.51
HLA-DQB1-204ENST00000399084 SAR1AQ9NR31 198 aa18.21■□□□□ 0.51
HLA-DQB1-204ENST00000399084 CASP8AP2Q9UKL3 1982 aa18.21■□□□□ 0.51
HLA-DQB1-204ENST00000399084 CASTOR2A6NHX0 329 aa18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 RFPL1O75677 317 aa18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 UNC5CO95185 931 aa18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 SERPINB4P48594 390 aa18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 NCALDP61601 193 aa18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 PITX1P78337 314 aaPredicted RBP18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 LPIN1Q14693 890 aa18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 BSPRYQ5W0U4 402 aa18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 OVOS1Q6IE37 1185 aa18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 BHLHA9Q7RTU4 235 aa18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 PDCD7Q8N8D1 485 aaKnown RBP18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 DEPDC1BQ8WUY9 529 aa18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 C10orf82Q8WW14 230 aa18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 RSPH1Q8WYR4 309 aa18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 ATP2A3Q93084 1043 aa18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 KLHL29Q96CT2 875 aa18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 OXNAD1Q96HP4 312 aaPredicted RBP18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 HAPLN3Q96S86 360 aa18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 ADAM2Q99965 735 aa18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 RTP3Q9BQQ7 232 aa18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 TSSK1BQ9BXA7 367 aa18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 ARHGEF3Q9NR81 526 aa18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 ABCC13Q9NSE7 274 aa18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 MTO1Q9Y2Z2 717 aaKnown RBP18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 NPY2RP49146 381 aa18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 ASRGL1Q7L266 308 aa18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 RNF180Q86T96 592 aa18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 ZNF598Q86UK7 904 aaKnown RBP18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 LRRC49Q8IUZ0 686 aa18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 INPP5DQ92835 1189 aa18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 RMDN2Q96LZ7 410 aa18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 RAB3IPQ96QF0 476 aaPredicted RBP18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 LRRC40Q9H9A6 602 aa18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 SLCO1B3Q9NPD5 702 aa18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 BFARQ9NZS9 450 aa18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 FNIP2Q9P278 1114 aa18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 KANSL3Q9P2N6 904 aa18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 SLC17A7Q9P2U7 560 aa18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 OR12D3Q9UGF7 316 aa18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 PCDHB8Q9UN66 801 aa18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 TIMM13Q9Y5L4 95 aaPredicted RBP18.2■□□□□ 0.5
HLA-DQB1-204ENST00000399084 CXorf49A8MYA2 514 aaPredicted RBP18.19■□□□□ 0.5
HLA-DQB1-204ENST00000399084 TMEM189-UBE2V1I3L0A0 370 aa18.19■□□□□ 0.5
HLA-DQB1-204ENST00000399084 GOLGA8RI6L899 631 aa18.19■□□□□ 0.5
HLA-DQB1-204ENST00000399084 CHUKO15111 745 aa18.19■□□□□ 0.5
HLA-DQB1-204ENST00000399084 AP2A1O95782 977 aa18.19■□□□□ 0.5
HLA-DQB1-204ENST00000399084 IGLV3-25P01717 112 aa18.19■□□□□ 0.5
HLA-DQB1-204ENST00000399084 COL6A1P12109 1028 aa18.19■□□□□ 0.5
HLA-DQB1-204ENST00000399084 NQO1P15559 274 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms