RNA–Protein interactions for RNA: ENST00000398958.6

RCC1-204, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RCC1, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-204ENST00000398958 BRCC3P46736 316 aa11.66□□□□□ -0.54
RCC1-204ENST00000398958 CLCNKBP51801 687 aa11.66□□□□□ -0.54
RCC1-204ENST00000398958 PITX1P78337 314 aaPredicted RBP11.66□□□□□ -0.54
RCC1-204ENST00000398958 KDSRQ06136 332 aa11.66□□□□□ -0.54
RCC1-204ENST00000398958 LSAMPQ13449 338 aa11.66□□□□□ -0.54
RCC1-204ENST00000398958 DPYSL3Q14195 570 aa11.66□□□□□ -0.54
RCC1-204ENST00000398958 C1orf146Q5VVC0 180 aa11.66□□□□□ -0.54
RCC1-204ENST00000398958 WSCD1Q658N2 575 aa11.66□□□□□ -0.54
RCC1-204ENST00000398958 SPATA31D4Q6ZUB0 917 aa11.66□□□□□ -0.54
RCC1-204ENST00000398958 NET1Q7Z628 596 aaPredicted RBP11.66□□□□□ -0.54
RCC1-204ENST00000398958 TMPRSS6Q8IU80 811 aa11.66□□□□□ -0.54
RCC1-204ENST00000398958 EXOC8Q8IYI6 725 aa11.66□□□□□ -0.54
RCC1-204ENST00000398958 SLC25A41Q8N5S1 370 aa11.66□□□□□ -0.54
RCC1-204ENST00000398958 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.66□□□□□ -0.54
RCC1-204ENST00000398958 RBM15BQ8NDT2 890 aaKnown RBP11.66□□□□□ -0.54
RCC1-204ENST00000398958 RAET1EQ8TD07 263 aa11.66□□□□□ -0.54
RCC1-204ENST00000398958 SLC2A14Q8TDB8 520 aa11.66□□□□□ -0.54
RCC1-204ENST00000398958 KCNN1Q92952 543 aa11.66□□□□□ -0.54
RCC1-204ENST00000398958 PPP2R3CQ969Q6 453 aa11.66□□□□□ -0.54
RCC1-204ENST00000398958 FAM111AQ96PZ2 611 aa11.66□□□□□ -0.54
RCC1-204ENST00000398958 EBF3Q9H4W6 596 aa11.66□□□□□ -0.54
RCC1-204ENST00000398958 PHF24Q9UPV7 400 aa11.66□□□□□ -0.54
RCC1-204ENST00000398958 COMMD3-BMI1R4GMX3 469 aa11.66□□□□□ -0.54
RCC1-204ENST00000398958 UNCXA6NJT0 531 aa11.65□□□□□ -0.54
RCC1-204ENST00000398958 C2CD4BA6NLJ0 364 aa11.65□□□□□ -0.54
RCC1-204ENST00000398958 NT5C1B-RDH14C9J2C7 533 aa11.65□□□□□ -0.54
RCC1-204ENST00000398958 PDLIM1O00151 329 aa11.65□□□□□ -0.54
RCC1-204ENST00000398958 MGEA5O60502 916 aa11.65□□□□□ -0.54
RCC1-204ENST00000398958 MT-ND3P03897 115 aa11.65□□□□□ -0.54
RCC1-204ENST00000398958 ITGAVP06756 1048 aa11.65□□□□□ -0.54
RCC1-204ENST00000398958 OR4Q2P0C623 313 aa11.65□□□□□ -0.54
RCC1-204ENST00000398958 RBL1P28749 1068 aa11.65□□□□□ -0.54
RCC1-204ENST00000398958 CRABP2P29373 138 aa11.65□□□□□ -0.54
RCC1-204ENST00000398958 ARPP19P56211 112 aa11.65□□□□□ -0.54
RCC1-204ENST00000398958 PRKD1Q15139 912 aaPredicted RBP11.65□□□□□ -0.54
RCC1-204ENST00000398958 LRRC36Q1X8D7 754 aa11.65□□□□□ -0.54
RCC1-204ENST00000398958 SOWAHAQ2M3V2 549 aa11.65□□□□□ -0.54
RCC1-204ENST00000398958 TRMT5Q32P41 509 aaKnown RBP11.65□□□□□ -0.54
RCC1-204ENST00000398958 PABPC1LQ4VXU2 614 aaKnown RBP11.65□□□□□ -0.54
RCC1-204ENST00000398958 LRRC38Q5VT99 294 aa11.65□□□□□ -0.54
RCC1-204ENST00000398958 SDHAF4Q5VUM1 108 aa11.65□□□□□ -0.54
RCC1-204ENST00000398958 ADGRD1Q6QNK2 874 aa11.65□□□□□ -0.54
RCC1-204ENST00000398958 MYLK4Q86YV6 388 aaPredicted RBP11.65□□□□□ -0.54
RCC1-204ENST00000398958 PALM2Q8IXS6 379 aa11.65□□□□□ -0.54
RCC1-204ENST00000398958 NIPA2Q8N8Q9 360 aa11.65□□□□□ -0.54
RCC1-204ENST00000398958 SMC1BQ8NDV3 1235 aa11.65□□□□□ -0.54
RCC1-204ENST00000398958 ALKBH8Q96BT7 664 aaKnown RBP11.65□□□□□ -0.54
RCC1-204ENST00000398958 KCNK16Q96T55 309 aa11.65□□□□□ -0.54
RCC1-204ENST00000398958 CCDC28BQ9BUN5 200 aa11.65□□□□□ -0.54
RCC1-204ENST00000398958 ASB7Q9H672 318 aa11.65□□□□□ -0.54
RCC1-204ENST00000398958 ASNSD1Q9NWL6 643 aa11.65□□□□□ -0.54
RCC1-204ENST00000398958 IL1RAPL1Q9NZN1 696 aa11.65□□□□□ -0.54
RCC1-204ENST00000398958 PPARGC1AQ9UBK2 798 aaKnown RBP11.65□□□□□ -0.54
RCC1-204ENST00000398958 PPM1HQ9ULR3 514 aa11.65□□□□□ -0.54
RCC1-204ENST00000398958 MCF2LO15068 1137 aa11.65□□□□□ -0.55
RCC1-204ENST00000398958 TGDSO95455 350 aa11.65□□□□□ -0.55
RCC1-204ENST00000398958 ITGB1P05556 798 aa11.65□□□□□ -0.55
RCC1-204ENST00000398958 P4HA1P13674 534 aa11.65□□□□□ -0.55
RCC1-204ENST00000398958 CCNFP41002 786 aa11.65□□□□□ -0.55
RCC1-204ENST00000398958 ELK3P41970 407 aa11.65□□□□□ -0.55
RCC1-204ENST00000398958 ZNF143P52747 638 aaPredicted RBP11.65□□□□□ -0.55
RCC1-204ENST00000398958 FCGRTP55899 365 aa11.65□□□□□ -0.55
RCC1-204ENST00000398958 BBS12Q6ZW61 710 aa11.65□□□□□ -0.55
RCC1-204ENST00000398958 TRIM74Q86UV6 250 aa11.65□□□□□ -0.55
RCC1-204ENST00000398958 TRIM73Q86UV7 250 aa11.65□□□□□ -0.55
RCC1-204ENST00000398958 TREML1Q86YW5 311 aa11.65□□□□□ -0.55
RCC1-204ENST00000398958 ATP11CQ8NB49 1132 aa11.65□□□□□ -0.55
RCC1-204ENST00000398958 KLHL23Q8NBE8 558 aa11.65□□□□□ -0.55
RCC1-204ENST00000398958 NKD2Q969F2 451 aaPredicted RBP11.65□□□□□ -0.55
RCC1-204ENST00000398958 HAPLN3Q96S86 360 aa11.65□□□□□ -0.55
RCC1-204ENST00000398958 MED10Q9BTT4 135 aa11.65□□□□□ -0.55
RCC1-204ENST00000398958 DHX35Q9H5Z1 703 aaKnown RBP11.65□□□□□ -0.55
RCC1-204ENST00000398958 PCDH9Q9HC56 1237 aa11.65□□□□□ -0.55
RCC1-204ENST00000398958 PREBQ9HCU5 417 aa11.65□□□□□ -0.55
RCC1-204ENST00000398958 RAB6BQ9NRW1 208 aa11.65□□□□□ -0.55
RCC1-204ENST00000398958 PRG3Q9Y2Y8 225 aaPredicted RBP11.65□□□□□ -0.55
RCC1-204ENST00000398958 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.65□□□□□ -0.55
RCC1-204ENST00000398958 IL4RP24394 825 aa11.64□□□□□ -0.55
RCC1-204ENST00000398958 GRIA1P42261 906 aa11.64□□□□□ -0.55
RCC1-204ENST00000398958 GATMP50440 423 aa11.64□□□□□ -0.55
RCC1-204ENST00000398958 YWHAGP61981 247 aaKnown RBP eCLIP11.64□□□□□ -0.55
RCC1-204ENST00000398958 TAP1Q03518 808 aa11.64□□□□□ -0.55
RCC1-204ENST00000398958 DEFB115Q30KQ5 88 aa11.64□□□□□ -0.55
RCC1-204ENST00000398958 RASSF3Q86WH2 238 aa11.64□□□□□ -0.55
RCC1-204ENST00000398958 ULK2Q8IYT8 1036 aa11.64□□□□□ -0.55
RCC1-204ENST00000398958 SMG8Q8ND04 991 aaKnown RBP11.64□□□□□ -0.55
RCC1-204ENST00000398958 C3orf58Q8NDZ4 430 aa11.64□□□□□ -0.55
RCC1-204ENST00000398958 FAF2Q96CS3 445 aa11.64□□□□□ -0.55
RCC1-204ENST00000398958 HIC2Q96JB3 615 aa11.64□□□□□ -0.55
RCC1-204ENST00000398958 SNRNP25Q9BV90 132 aaKnown RBP11.64□□□□□ -0.55
RCC1-204ENST00000398958 SHOC2Q9UQ13 582 aa11.64□□□□□ -0.55
RCC1-204ENST00000398958 TLL2Q9Y6L7 1015 aa11.64□□□□□ -0.55
RCC1-204ENST00000398958 SPECC1L-ADORA2AF8WAN1 911 aa11.64□□□□□ -0.55
RCC1-204ENST00000398958 CA12O43570 354 aa11.64□□□□□ -0.55
RCC1-204ENST00000398958 TM7SF2O76062 418 aa11.64□□□□□ -0.55
RCC1-204ENST00000398958 ACTR3P61158 418 aa11.64□□□□□ -0.55
RCC1-204ENST00000398958 ROR1Q01973 937 aa11.64□□□□□ -0.55
RCC1-204ENST00000398958 GBE1Q04446 702 aa11.64□□□□□ -0.55
RCC1-204ENST00000398958 NME3Q13232 169 aa11.64□□□□□ -0.55
RCC1-204ENST00000398958 KLHL38Q2WGJ6 581 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms