RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 STX10O60499 249 aa12.53□□□□□ -0.4
TFF3-202ENST00000398431 SEMA4FO95754 770 aa12.53□□□□□ -0.4
TFF3-202ENST00000398431 DLDP09622 509 aaKnown RBP12.53□□□□□ -0.4
TFF3-202ENST00000398431 VDRP11473 427 aa12.53□□□□□ -0.4
TFF3-202ENST00000398431 GRIA4P48058 902 aa12.53□□□□□ -0.4
TFF3-202ENST00000398431 PMS1P54277 932 aaKnown RBP12.53□□□□□ -0.4
TFF3-202ENST00000398431 SLC8A3P57103 927 aa12.53□□□□□ -0.4
TFF3-202ENST00000398431 ZNF445P59923 1031 aa12.53□□□□□ -0.4
TFF3-202ENST00000398431 KRT85P78386 507 aa12.53□□□□□ -0.4
TFF3-202ENST00000398431 ARID5AQ03989 594 aa12.53□□□□□ -0.4
TFF3-202ENST00000398431 COL28A1Q2UY09 1125 aa12.53□□□□□ -0.4
TFF3-202ENST00000398431 FAM133BQ5BKY9 247 aaKnown RBP12.53□□□□□ -0.4
TFF3-202ENST00000398431 MPP7Q5T2T1 576 aa12.53□□□□□ -0.4
TFF3-202ENST00000398431 ANKRD40Q6AI12 368 aa12.53□□□□□ -0.4
TFF3-202ENST00000398431 PMF1Q6P1K2 205 aa12.53□□□□□ -0.4
TFF3-202ENST00000398431 RFWD3Q6PCD5 774 aa12.53□□□□□ -0.4
TFF3-202ENST00000398431 LAYNQ6UX15 382 aa12.53□□□□□ -0.4
TFF3-202ENST00000398431 AHI1Q8N157 1196 aa12.53□□□□□ -0.4
TFF3-202ENST00000398431 SNX19Q92543 992 aa12.53□□□□□ -0.4
TFF3-202ENST00000398431 BTBD1Q9H0C5 482 aa12.53□□□□□ -0.4
TFF3-202ENST00000398431 EBF2Q9HAK2 575 aa12.53□□□□□ -0.4
TFF3-202ENST00000398431 CNGB3Q9NQW8 809 aa12.53□□□□□ -0.4
TFF3-202ENST00000398431 DKK4Q9UBT3 224 aa12.53□□□□□ -0.4
TFF3-202ENST00000398431 INTS6Q9UL03 887 aaKnown RBP12.53□□□□□ -0.4
TFF3-202ENST00000398431 KIAA1257Q9ULG3 409 aa12.53□□□□□ -0.4
TFF3-202ENST00000398431 ITPR1Q14643 2758 aa12.53□□□□□ -0.4
TFF3-202ENST00000398431 TRABD2BA6NFA1 517 aa12.52□□□□□ -0.41
TFF3-202ENST00000398431 PCDHGA12O60330 932 aa12.52□□□□□ -0.41
TFF3-202ENST00000398431 TBL1XO60907 577 aa12.52□□□□□ -0.41
TFF3-202ENST00000398431 FSBPO95073 299 aa12.52□□□□□ -0.41
TFF3-202ENST00000398431 FYNP06241 537 aa12.52□□□□□ -0.41
TFF3-202ENST00000398431 IGHV4-34P06331 123 aa12.52□□□□□ -0.41
TFF3-202ENST00000398431 EPB41P11171 864 aaKnown RBP12.52□□□□□ -0.41
TFF3-202ENST00000398431 LCP1P13796 627 aa12.52□□□□□ -0.41
TFF3-202ENST00000398431 CD19P15391 556 aa12.52□□□□□ -0.41
TFF3-202ENST00000398431 CD27P26842 260 aa12.52□□□□□ -0.41
TFF3-202ENST00000398431 CTSKP43235 329 aa12.52□□□□□ -0.41
TFF3-202ENST00000398431 RGS7P49802 495 aa12.52□□□□□ -0.41
TFF3-202ENST00000398431 ZBTB16Q05516 673 aa12.52□□□□□ -0.41
TFF3-202ENST00000398431 GSE1Q14687 1217 aa12.52□□□□□ -0.41
TFF3-202ENST00000398431 SUZ12Q15022 739 aaKnown RBP12.52□□□□□ -0.41
TFF3-202ENST00000398431 ACAP1Q15027 740 aa12.52□□□□□ -0.41
TFF3-202ENST00000398431 NADSYN1Q6IA69 706 aa12.52□□□□□ -0.41
TFF3-202ENST00000398431 LCLAT1Q6UWP7 414 aa12.52□□□□□ -0.41
TFF3-202ENST00000398431 PDZD3Q86UT5 571 aa12.52□□□□□ -0.41
TFF3-202ENST00000398431 FIBINQ8TAL6 211 aa12.52□□□□□ -0.41
TFF3-202ENST00000398431 CLEC4CQ8WTT0 213 aa12.52□□□□□ -0.41
TFF3-202ENST00000398431 HNRNPLLQ8WVV9 542 aaKnown RBP12.52□□□□□ -0.41
TFF3-202ENST00000398431 IGSF8Q969P0 613 aa12.52□□□□□ -0.41
TFF3-202ENST00000398431 SLC35C1Q96A29 364 aa12.52□□□□□ -0.41
TFF3-202ENST00000398431 AZIN2Q96A70 460 aa12.52□□□□□ -0.41
TFF3-202ENST00000398431 TTC17Q96AE7 1141 aa12.52□□□□□ -0.41
TFF3-202ENST00000398431 MRGPRX3Q96LB0 322 aa12.52□□□□□ -0.41
TFF3-202ENST00000398431 IRX2Q9BZI1 471 aaPredicted RBP12.52□□□□□ -0.41
TFF3-202ENST00000398431 RSPH9Q9H1X1 276 aaPredicted RBP12.52□□□□□ -0.41
TFF3-202ENST00000398431 FBRSQ9HAH7 460 aa12.52□□□□□ -0.41
TFF3-202ENST00000398431 HESX1Q9UBX0 185 aa12.52□□□□□ -0.41
TFF3-202ENST00000398431 SUN2Q9UH99 717 aa12.52□□□□□ -0.41
TFF3-202ENST00000398431 RAXQ9Y2V3 346 aa12.52□□□□□ -0.41
TFF3-202ENST00000398431 ASXL3Q9C0F0 2248 aa12.52□□□□□ -0.41
TFF3-202ENST00000398431 GOLGA8CPA6NN73 597 aa12.51□□□□□ -0.41
TFF3-202ENST00000398431 PIK3R2O00459 728 aa12.51□□□□□ -0.41
TFF3-202ENST00000398431 TNFSF14O43557 240 aa12.51□□□□□ -0.41
TFF3-202ENST00000398431 ACSL4O60488 711 aa12.51□□□□□ -0.41
TFF3-202ENST00000398431 CALCAP01258 141 aa12.51□□□□□ -0.41
TFF3-202ENST00000398431 DNTTP04053 509 aa12.51□□□□□ -0.41
TFF3-202ENST00000398431 ATP5BP06576 529 aaKnown RBP12.51□□□□□ -0.41
TFF3-202ENST00000398431 SETSIPP0DME0 302 aa12.51□□□□□ -0.41
TFF3-202ENST00000398431 POLR2EP19388 210 aaKnown RBP12.51□□□□□ -0.41
TFF3-202ENST00000398431 CYP4F3Q08477 520 aa12.51□□□□□ -0.41
TFF3-202ENST00000398431 LRMPQ12912 555 aa12.51□□□□□ -0.41
TFF3-202ENST00000398431 PNOCQ13519 176 aa12.51□□□□□ -0.41
TFF3-202ENST00000398431 TEAD4Q15561 434 aa12.51□□□□□ -0.41
TFF3-202ENST00000398431 CNGA2Q16280 664 aa12.51□□□□□ -0.41
TFF3-202ENST00000398431 COBLL1Q53SF7 1204 aa12.51□□□□□ -0.41
TFF3-202ENST00000398431 PRAMEF14Q5SWL7 426 aa12.51□□□□□ -0.41
TFF3-202ENST00000398431 SIX6OS1Q8N1H7 587 aa12.51□□□□□ -0.41
TFF3-202ENST00000398431 KAT5Q92993 513 aa12.51□□□□□ -0.41
TFF3-202ENST00000398431 SGK2Q9HBY8 427 aa12.51□□□□□ -0.41
TFF3-202ENST00000398431 SERGEFQ9UGK8 458 aa12.51□□□□□ -0.41
TFF3-202ENST00000398431 FAM149AA5PLN7 773 aa12.5□□□□□ -0.41
TFF3-202ENST00000398431 WNT9AO14904 365 aa12.5□□□□□ -0.41
TFF3-202ENST00000398431 SLC16A3O15427 465 aaKnown RBP12.5□□□□□ -0.41
TFF3-202ENST00000398431 PAPSS1O43252 624 aaPredicted RBP12.5□□□□□ -0.41
TFF3-202ENST00000398431 SIN3BO75182 1162 aa12.5□□□□□ -0.41
TFF3-202ENST00000398431 WNT1P04628 370 aa12.5□□□□□ -0.41
TFF3-202ENST00000398431 PAEPP09466 180 aa12.5□□□□□ -0.41
TFF3-202ENST00000398431 GALCP54803 685 aa12.5□□□□□ -0.41
TFF3-202ENST00000398431 RPS24P62847 133 aaKnown RBP12.5□□□□□ -0.41
TFF3-202ENST00000398431 FKBP3Q00688 224 aaKnown RBP12.5□□□□□ -0.41
TFF3-202ENST00000398431 KCNJ12Q14500 433 aa12.5□□□□□ -0.41
TFF3-202ENST00000398431 SHBQ15464 509 aa12.5□□□□□ -0.41
TFF3-202ENST00000398431 SMAD1Q15797 465 aaKnown RBP12.5□□□□□ -0.41
TFF3-202ENST00000398431 DCAF17Q5H9S7 520 aaPredicted RBP12.5□□□□□ -0.41
TFF3-202ENST00000398431 FSCBQ5H9T9 825 aa12.5□□□□□ -0.41
TFF3-202ENST00000398431 C9orf64Q5T6V5 341 aa12.5□□□□□ -0.41
TFF3-202ENST00000398431 ZNF658Q5TYW1 1059 aaPredicted RBP12.5□□□□□ -0.41
TFF3-202ENST00000398431 TCERG1LQ5VWI1 586 aa12.5□□□□□ -0.41
TFF3-202ENST00000398431 ZNF776Q68DI1 518 aaPredicted RBP12.5□□□□□ -0.41
TFF3-202ENST00000398431 KIAA0895LQ68EN5 471 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms