RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 DMAC2Q9NW81 257 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 NOCTQ9UK39 431 aaKnown RBP11.31□□□□□ -0.6
HPS4-202ENST00000398145 PLA2G4CQ9UP65 541 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 HBS1LQ9Y450 684 aaKnown RBP11.31□□□□□ -0.6
HPS4-202ENST00000398145 DCCP43146 1447 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 CAPN8A6NHC0 703 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 TPH1P17752 444 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 ACO1P21399 889 aaKnown RBP11.31□□□□□ -0.6
HPS4-202ENST00000398145 EIF2B2P49770 351 aaKnown RBP11.31□□□□□ -0.6
HPS4-202ENST00000398145 CRADDP78560 199 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 LAMC2Q13753 1193 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 GTF2H3Q13889 308 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 RP9Q8TA86 221 aaKnown RBP11.31□□□□□ -0.6
HPS4-202ENST00000398145 L3MBTL3Q96JM7 780 aaPredicted RBP11.31□□□□□ -0.6
HPS4-202ENST00000398145 ZNF570Q96NI8 536 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 SEPHS2Q99611 448 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 PLGRKTQ9HBL7 147 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 TJP2Q9UDY2 1190 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 AJAP1Q9UKB5 411 aaPredicted RBP11.31□□□□□ -0.6
HPS4-202ENST00000398145 SLC13A4Q9UKG4 626 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 SIGLEC1Q9BZZ2 1709 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 CLUHO75153 1309 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 A0A0A0MRY4 1105 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 EVPLLA8MZ36 301 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 PHGDHO43175 533 aaKnown RBP11.31□□□□□ -0.6
HPS4-202ENST00000398145 BAIAP3O94812 1187 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 CSPG5O95196 566 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 DLGAP3O95886 979 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 CCNB1P14635 433 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 ACAT1P24752 427 aaKnown RBP11.31□□□□□ -0.6
HPS4-202ENST00000398145 NPY2RP49146 381 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 BST2Q10589 180 aaKnown RBP11.31□□□□□ -0.6
HPS4-202ENST00000398145 POU6F1Q14863 301 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 RNASEH2BQ5TBB1 312 aaKnown RBP11.31□□□□□ -0.6
HPS4-202ENST00000398145 RINLQ6ZS11 566 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 CPT1BQ92523 772 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 SPATA13Q96N96 652 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 EXOSC4Q9NPD3 245 aaKnown RBP11.31□□□□□ -0.6
HPS4-202ENST00000398145 RSL24D1Q9UHA3 163 aaKnown RBP11.31□□□□□ -0.6
HPS4-202ENST00000398145 DAPK2Q9UIK4 370 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 ANKRD6Q9Y2G4 727 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 NDUFAF1Q9Y375 327 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 PSMD12O00232 456 aaPredicted RBP11.3□□□□□ -0.6
HPS4-202ENST00000398145 USP12O75317 370 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 WDR47O94967 919 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 ATP6V1B2P21281 511 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 FGFR3P22607 806 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 CRABP2P29373 138 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 HIRAP54198 1017 aaPredicted RBP11.3□□□□□ -0.6
HPS4-202ENST00000398145 SLC6A3Q01959 620 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 TMEM62Q0P6H9 643 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 SLCO2A1Q92959 643 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 CERS2Q96G23 380 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 NSMCE2Q96MF7 247 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 APBA2Q99767 749 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 ASB7Q9H672 318 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 EPS8L2Q9H6S3 715 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 SATB2Q9UPW6 733 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 DMTF1Q9Y222 760 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 ABCC6O95255 1503 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 XRN1Q8IZH2 1706 aaKnown RBP11.3□□□□□ -0.6
HPS4-202ENST00000398145 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.3□□□□□ -0.6
HPS4-202ENST00000398145 TBX10O75333 385 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 LYPLA1O75608 230 aaPredicted RBP11.3□□□□□ -0.6
HPS4-202ENST00000398145 TRUB2O95900 331 aaKnown RBP11.3□□□□□ -0.6
HPS4-202ENST00000398145 ITGA2BP08514 1039 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 RPS6KA3P51812 740 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 PLIN5Q00G26 463 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 CYP51A1Q16850 503 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 KIAA1841Q6NSI8 718 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 LRRC8DQ7L1W4 858 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 CHSY1Q86X52 802 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 OR5B17Q8NGF7 314 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 C10orf82Q8WW14 230 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 SHISA4Q96DD7 197 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 LATS2Q9NRM7 1088 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 ATAD3AQ9NVI7 634 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 FAM8A1Q9UBU6 413 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 ITGA11Q9UKX5 1188 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 SLC30A1Q9Y6M5 507 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 WASF2Q9Y6W5 498 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 SPEF2Q9C093 1822 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 VAPBO95292 243 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 MYL3P08590 195 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 IFNA8P32881 189 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 CLK2P49760 499 aaKnown RBP11.3□□□□□ -0.6
HPS4-202ENST00000398145 TRAF2Q12933 501 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 FRG1Q14331 258 aaKnown RBP11.3□□□□□ -0.6
HPS4-202ENST00000398145 NOTUMQ6P988 496 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 RFWD3Q6PCD5 774 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 UCMAQ8WVF2 138 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 FAM84AQ96KN4 292 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 KCTD14Q9BQ13 255 aaPredicted RBP11.3□□□□□ -0.6
HPS4-202ENST00000398145 DEFB129Q9H1M3 183 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 PORCNQ9H237 461 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 AFF4Q9UHB7 1163 aaKnown RBP11.3□□□□□ -0.6
HPS4-202ENST00000398145 PCDHA11Q9Y5I1 949 aa11.3□□□□□ -0.6
HPS4-202ENST00000398145 SPDYE5A6NIY4 337 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 ACKR2O00590 384 aa11.29□□□□□ -0.6
HPS4-202ENST00000398145 RTN3O95197 1032 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms