RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 IYDQ6PHW0 289 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 UNC45BQ8IWX7 931 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 FAM178BQ8IXR5 827 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 FAM133AQ8N9E0 248 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 MFSD2AQ8NA29 543 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 ZNF527Q8NB42 609 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 ZNF680Q8NEM1 530 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 EXD1Q8NHP7 514 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 TSPEARQ8WU66 669 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 C19orf60Q96EN9 201 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 RPRD1AQ96P16 312 aaPredicted RBP6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 PNMA5Q96PV4 448 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 EHD4Q9H223 541 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 CAAP1Q9H8G2 361 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 ACTR5Q9H9F9 607 aaPredicted RBP6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 PCDHA12Q9UN75 941 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 HCN4Q9Y3Q4 1203 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 XIRP2A4UGR9 3374 aa6.77□□□□□ -1.32
TM9SF4-202ENST00000398022 WTIPA6NIX2 430 aaPredicted RBP6.77□□□□□ -1.32
TM9SF4-202ENST00000398022 ZNF233A6NK53 670 aa6.77□□□□□ -1.32
TM9SF4-202ENST00000398022 PCP4L1A6NKN8 68 aa6.77□□□□□ -1.32
TM9SF4-202ENST00000398022 HSBP1L1C9JCN9 74 aa6.77□□□□□ -1.32
TM9SF4-202ENST00000398022 XPO1O14980 1071 aaKnown RBP6.77□□□□□ -1.32
TM9SF4-202ENST00000398022 CLTBP09497 229 aa6.77□□□□□ -1.32
TM9SF4-202ENST00000398022 MAPK8P45983 427 aa6.77□□□□□ -1.32
TM9SF4-202ENST00000398022 RNF4P78317 190 aa6.77□□□□□ -1.32
TM9SF4-202ENST00000398022 KCNJ10P78508 379 aa6.77□□□□□ -1.32
TM9SF4-202ENST00000398022 GUCY1A3Q02108 690 aa6.77□□□□□ -1.32
TM9SF4-202ENST00000398022 GCNT1Q02742 428 aa6.77□□□□□ -1.32
TM9SF4-202ENST00000398022 RAPSNQ13702 412 aa6.77□□□□□ -1.32
TM9SF4-202ENST00000398022 HGSNATQ68CP4 663 aa6.77□□□□□ -1.32
TM9SF4-202ENST00000398022 FAM171BQ6P995 826 aa6.77□□□□□ -1.32
TM9SF4-202ENST00000398022 TXNDC11Q6PKC3 985 aa6.77□□□□□ -1.32
TM9SF4-202ENST00000398022 CRELD2Q6UXH1 353 aaPredicted RBP6.77□□□□□ -1.32
TM9SF4-202ENST00000398022 TMC7Q7Z402 723 aa6.77□□□□□ -1.32
TM9SF4-202ENST00000398022 PEX26Q7Z412 305 aa6.77□□□□□ -1.32
TM9SF4-202ENST00000398022 ANGPTL6Q8NI99 470 aa6.77□□□□□ -1.32
TM9SF4-202ENST00000398022 SPPL3Q8TCT6 385 aa6.77□□□□□ -1.32
TM9SF4-202ENST00000398022 ZNF473Q8WTR7 871 aaKnown RBP6.77□□□□□ -1.32
TM9SF4-202ENST00000398022 CASKIN2Q8WXE0 1202 aa6.77□□□□□ -1.32
TM9SF4-202ENST00000398022 ABTB1Q969K4 478 aaPredicted RBP6.77□□□□□ -1.32
TM9SF4-202ENST00000398022 HAUS1Q96CS2 278 aa6.77□□□□□ -1.32
TM9SF4-202ENST00000398022 HES6Q96HZ4 224 aa6.77□□□□□ -1.32
TM9SF4-202ENST00000398022 CAMK1GQ96NX5 476 aa6.77□□□□□ -1.32
TM9SF4-202ENST00000398022 CCT8L2Q96SF2 557 aa6.77□□□□□ -1.32
TM9SF4-202ENST00000398022 CPVLQ9H3G5 476 aa6.77□□□□□ -1.32
TM9SF4-202ENST00000398022 VTA1Q9NP79 307 aa6.77□□□□□ -1.32
TM9SF4-202ENST00000398022 PLSCR4Q9NRQ2 329 aa6.77□□□□□ -1.32
TM9SF4-202ENST00000398022 RNF181Q9P0P0 153 aa6.77□□□□□ -1.32
TM9SF4-202ENST00000398022 SPEF1Q9Y4P9 236 aa6.77□□□□□ -1.32
TM9SF4-202ENST00000398022 KANSL1LA0AUZ9 987 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 H0YIV9 168 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 RAD51CO43502 376 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 ECE2O60344 883 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 SERPINB7O75635 380 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 TBX18O95935 607 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 ETV5P41161 510 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 KRT6CP48668 564 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 CACNB3P54284 484 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 FOXK2Q01167 660 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 C17orf67Q0P5P2 114 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 TMEM119Q4V9L6 283 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 STXBP4Q6ZWJ1 553 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 NELFCDQ8IXH7 590 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 OR8H3Q8N146 312 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 ZSCAN1Q8NBB4 408 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 RNF169Q8NCN4 708 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 C3orf58Q8NDZ4 430 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 UBLCP1Q8WVY7 318 aaPredicted RBP6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 CENPIQ92674 756 aaPredicted RBP6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 CIDECQ96AQ7 238 aaPredicted RBP6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 INPP4AQ96PE3 977 aaPredicted RBP6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 USB1Q9BQ65 265 aaKnown RBP6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 CARD9Q9H257 536 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 CCDC86Q9H6F5 360 aaKnown RBP6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 ARMCX3Q9UH62 379 aaPredicted RBP6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 VPS51Q9UID3 782 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 LNPEPQ9UIQ6 1025 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 UTP11Q9Y3A2 253 aaKnown RBP6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 STARD13Q9Y3M8 1113 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 BTNL10A8MVZ5 291 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 ATP2C2O75185 946 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 TDP2O95551 362 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 SERPINB2P05120 415 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 H2AFZP0C0S5 128 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 BTDP43251 543 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 ALDH3A2P51648 485 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 DUSP4Q13115 394 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 GALEQ14376 348 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 CYTH1Q15438 398 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 TCEA2Q15560 299 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 DIXDC1Q155Q3 683 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 ABCB5Q2M3G0 1257 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 EDRF1Q3B7T1 1238 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 DAB2IPQ5VWQ8 1189 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 ZNF852Q6ZMS4 543 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 H2AFVQ71UI9 128 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 GPBP1Q86WP2 473 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 TRIM59Q8IWR1 403 aa6.77□□□□□ -1.33
TM9SF4-202ENST00000398022 MYCT1Q8N699 235 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms