RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 HAUS5O94927 633 aa18.88■□□□□ 0.61
CHRFAM7A-202ENST00000397827 NPR3P17342 541 aa18.88■□□□□ 0.61
CHRFAM7A-202ENST00000397827 GM2AP17900 193 aa18.88■□□□□ 0.61
CHRFAM7A-202ENST00000397827 LIMS2Q7Z4I7 341 aa18.88■□□□□ 0.61
CHRFAM7A-202ENST00000397827 CTU1Q7Z7A3 348 aaKnown RBP18.88■□□□□ 0.61
CHRFAM7A-202ENST00000397827 RNF169Q8NCN4 708 aa18.88■□□□□ 0.61
CHRFAM7A-202ENST00000397827 LRRC4Q9HBW1 653 aa18.88■□□□□ 0.61
CHRFAM7A-202ENST00000397827 MOCS1Q9NZB8 636 aa18.88■□□□□ 0.61
CHRFAM7A-202ENST00000397827 PTGESO14684 152 aa18.88■□□□□ 0.61
CHRFAM7A-202ENST00000397827 LUC7L3O95232 432 aaKnown RBP18.88■□□□□ 0.61
CHRFAM7A-202ENST00000397827 TGDSO95455 350 aa18.88■□□□□ 0.61
CHRFAM7A-202ENST00000397827 GSTA2P09210 222 aa18.88■□□□□ 0.61
CHRFAM7A-202ENST00000397827 PTPN1P18031 435 aaKnown RBP18.88■□□□□ 0.61
CHRFAM7A-202ENST00000397827 PTPN4P29074 926 aa18.88■□□□□ 0.61
CHRFAM7A-202ENST00000397827 CDK16Q00536 496 aa18.88■□□□□ 0.61
CHRFAM7A-202ENST00000397827 OLIG2Q13516 323 aa18.88■□□□□ 0.61
CHRFAM7A-202ENST00000397827 CHI3L2Q15782 390 aa18.88■□□□□ 0.61
CHRFAM7A-202ENST00000397827 MDH1BQ5I0G3 518 aa18.88■□□□□ 0.61
CHRFAM7A-202ENST00000397827 CLEC20AQ6ZU45 233 aa18.88■□□□□ 0.61
CHRFAM7A-202ENST00000397827 MIPEPQ99797 713 aa18.88■□□□□ 0.61
CHRFAM7A-202ENST00000397827 MED10Q9BTT4 135 aa18.88■□□□□ 0.61
CHRFAM7A-202ENST00000397827 PIDD1Q9HB75 910 aa18.88■□□□□ 0.61
CHRFAM7A-202ENST00000397827 PIGVQ9NUD9 493 aa18.88■□□□□ 0.61
CHRFAM7A-202ENST00000397827 NKX1-2Q9UD57 310 aaPredicted RBP18.88■□□□□ 0.61
CHRFAM7A-202ENST00000397827 MGAT1P26572 445 aa18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 PSMB4P28070 264 aa18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 CCNFP41002 786 aa18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 E2F7Q96AV8 911 aa18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 SKA1Q96BD8 255 aa18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 PRDM12Q9H4Q4 367 aa18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 SAR1AQ9NR31 198 aa18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 MARCOQ9UEW3 520 aaPredicted RBP18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 MTO1Q9Y2Z2 717 aaKnown RBP18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 TIMM13Q9Y5L4 95 aaPredicted RBP18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 NRP1O14786 923 aa18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 DAB1O75553 588 aa18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 TOMM70O94826 608 aa18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 KITP10721 976 aa18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 RARBP10826 455 aa18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 WARSP23381 471 aaKnown RBP18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 NOS2P35228 1153 aa18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 AFF1P51825 1210 aaKnown RBP18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 ARHGAP22Q7Z5H3 698 aa18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 SIX6OS1Q8N1H7 587 aa18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 NPY6RQ99463 290 aa18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 ARMCX1Q9P291 453 aa18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 FAM72CH0Y354 149 aa18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 KCNK1O00180 336 aa18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 TRAFD1O14545 582 aaPredicted RBP18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 ZNF865P0CJ78 1059 aaPredicted RBP18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 TKTL1P51854 596 aa18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 MXRA7P84157 204 aa18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 SPDYAQ5MJ70 313 aa18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 FAM72AQ5TYM5 149 aa18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 TRIM68Q6AZZ1 485 aa18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 FAM72DQ6L9T8 149 aa18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 CES3Q6UWW8 571 aa18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 ZCCHC23Q6ZST2 131 aa18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 ALYREFQ86V81 257 aaKnown RBP18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 FAM72BQ86X60 149 aa18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 NUDCD3Q8IVD9 361 aa18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 GALNT15Q8N3T1 639 aa18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 MTBPQ96DY7 904 aa18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 C20orf27Q9GZN8 174 aa18.87■□□□□ 0.61
CHRFAM7A-202ENST00000397827 IQCA1LA6NCM1 817 aa18.86■□□□□ 0.61
CHRFAM7A-202ENST00000397827 HACD1B0YJ81 288 aa18.86■□□□□ 0.61
CHRFAM7A-202ENST00000397827 I3L4J1 428 aa18.86■□□□□ 0.61
CHRFAM7A-202ENST00000397827 KLF11O14901 512 aa18.86■□□□□ 0.61
CHRFAM7A-202ENST00000397827 AMHP03971 560 aa18.86■□□□□ 0.61
CHRFAM7A-202ENST00000397827 FAM163BP0C2L3 166 aa18.86■□□□□ 0.61
CHRFAM7A-202ENST00000397827 DEUP1Q05D60 604 aa18.86■□□□□ 0.61
CHRFAM7A-202ENST00000397827 C1QTNF12Q5T7M4 302 aa18.86■□□□□ 0.61
CHRFAM7A-202ENST00000397827 SPRYD7Q5W111 196 aa18.86■□□□□ 0.61
CHRFAM7A-202ENST00000397827 ARID3BQ8IVW6 561 aaPredicted RBP18.86■□□□□ 0.61
CHRFAM7A-202ENST00000397827 TOP6BLQ8N6T0 577 aa18.86■□□□□ 0.61
CHRFAM7A-202ENST00000397827 KCNV2Q8TDN2 545 aa18.86■□□□□ 0.61
CHRFAM7A-202ENST00000397827 ARNTL2Q8WYA1 636 aa18.86■□□□□ 0.61
CHRFAM7A-202ENST00000397827 NT5C3BQ969T7 300 aa18.86■□□□□ 0.61
CHRFAM7A-202ENST00000397827 ANLNQ9NQW6 1124 aa18.86■□□□□ 0.61
CHRFAM7A-202ENST00000397827 KRT82Q9NSB4 513 aa18.86■□□□□ 0.61
CHRFAM7A-202ENST00000397827 LNPEPQ9UIQ6 1025 aa18.86■□□□□ 0.61
CHRFAM7A-202ENST00000397827 H3BRJ5 948 aa18.86■□□□□ 0.61
CHRFAM7A-202ENST00000397827 FDFT1P37268 417 aa18.86■□□□□ 0.61
CHRFAM7A-202ENST00000397827 CRYBB1P53674 252 aaPredicted RBP18.86■□□□□ 0.61
CHRFAM7A-202ENST00000397827 TAF11Q15544 211 aa18.86■□□□□ 0.61
CHRFAM7A-202ENST00000397827 ZNF567Q8N184 647 aa18.86■□□□□ 0.61
CHRFAM7A-202ENST00000397827 SLC7A14Q8TBB6 771 aa18.86■□□□□ 0.61
CHRFAM7A-202ENST00000397827 FAM81AQ8TBF8 368 aa18.86■□□□□ 0.61
CHRFAM7A-202ENST00000397827 KCNK16Q96T55 309 aa18.86■□□□□ 0.61
CHRFAM7A-202ENST00000397827 DDX43Q9NXZ2 648 aaKnown RBP18.86■□□□□ 0.61
CHRFAM7A-202ENST00000397827 PSAT1Q9Y617 370 aa18.86■□□□□ 0.61
CHRFAM7A-202ENST00000397827 SDR42E2A6NKP2 422 aa18.85■□□□□ 0.61
CHRFAM7A-202ENST00000397827 HAS3O00219 553 aa18.85■□□□□ 0.61
CHRFAM7A-202ENST00000397827 MAP3K13O43283 966 aa18.85■□□□□ 0.61
CHRFAM7A-202ENST00000397827 WASHC5Q12768 1159 aa18.85■□□□□ 0.61
CHRFAM7A-202ENST00000397827 HSF5Q4G112 596 aaPredicted RBP18.85■□□□□ 0.61
CHRFAM7A-202ENST00000397827 C16orf46Q6P387 395 aa18.85■□□□□ 0.61
CHRFAM7A-202ENST00000397827 STKLD1Q8NE28 680 aa18.85■□□□□ 0.61
CHRFAM7A-202ENST00000397827 PGBD4Q96DM1 585 aa18.85■□□□□ 0.61
CHRFAM7A-202ENST00000397827 PTCD3Q96EY7 689 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms