RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 LRRN4Q8WUT4 740 aa21.88■■□□□ 1.09
CPNE1-204ENST00000397443 RHOXF2Q9BQY4 288 aa21.88■■□□□ 1.09
CPNE1-204ENST00000397443 DCLK3Q9C098 648 aa21.88■■□□□ 1.09
CPNE1-204ENST00000397443 RCOR3Q9P2K3 495 aaPredicted RBP21.88■■□□□ 1.09
CPNE1-204ENST00000397443 CCL26Q9Y258 94 aa21.88■■□□□ 1.09
CPNE1-204ENST00000397443 BRWD1Q9NSI6 2320 aa21.87■■□□□ 1.09
CPNE1-204ENST00000397443 EFCAB8A8MWE9 144 aa21.87■■□□□ 1.09
CPNE1-204ENST00000397443 CCDC188H7C350 402 aa21.87■■□□□ 1.09
CPNE1-204ENST00000397443 ZNF197O14709 1029 aa21.87■■□□□ 1.09
CPNE1-204ENST00000397443 PHF2O75151 1096 aa21.87■■□□□ 1.09
CPNE1-204ENST00000397443 DPYSQ14117 519 aa21.87■■□□□ 1.09
CPNE1-204ENST00000397443 ERCC6LQ2NKX8 1250 aa21.87■■□□□ 1.09
CPNE1-204ENST00000397443 SLC9A4Q6AI14 798 aa21.87■■□□□ 1.09
CPNE1-204ENST00000397443 TTC27Q6P3X3 843 aa21.87■■□□□ 1.09
CPNE1-204ENST00000397443 SYCE2Q6PIF2 218 aa21.87■■□□□ 1.09
CPNE1-204ENST00000397443 VSIG1Q86XK7 387 aa21.87■■□□□ 1.09
CPNE1-204ENST00000397443 MYRIPQ8NFW9 859 aa21.87■■□□□ 1.09
CPNE1-204ENST00000397443 ADAMTS19Q8TE59 1207 aa21.87■■□□□ 1.09
CPNE1-204ENST00000397443 ZSWIM3Q96MP5 696 aa21.87■■□□□ 1.09
CPNE1-204ENST00000397443 TASP1Q9H6P5 420 aa21.87■■□□□ 1.09
CPNE1-204ENST00000397443 C10orf88Q9H8K7 445 aa21.87■■□□□ 1.09
CPNE1-204ENST00000397443 CLDND1Q9NY35 253 aa21.87■■□□□ 1.09
CPNE1-204ENST00000397443 STIM2Q9P246 746 aa21.87■■□□□ 1.09
CPNE1-204ENST00000397443 CFAP97Q9P2B7 532 aa21.87■■□□□ 1.09
CPNE1-204ENST00000397443 AMACRQ9UHK6 382 aa21.87■■□□□ 1.09
CPNE1-204ENST00000397443 APOC4-APOC2K7ER74 178 aa21.86■■□□□ 1.09
CPNE1-204ENST00000397443 ACSL4O60488 711 aa21.86■■□□□ 1.09
CPNE1-204ENST00000397443 APOC2P02655 101 aa21.86■■□□□ 1.09
CPNE1-204ENST00000397443 SLC11A2P49281 568 aa21.86■■□□□ 1.09
CPNE1-204ENST00000397443 IRAK1P51617 712 aa21.86■■□□□ 1.09
CPNE1-204ENST00000397443 GBE1Q04446 702 aa21.86■■□□□ 1.09
CPNE1-204ENST00000397443 ITIH3Q06033 890 aa21.86■■□□□ 1.09
CPNE1-204ENST00000397443 DLX2Q07687 328 aaPredicted RBP21.86■■□□□ 1.09
CPNE1-204ENST00000397443 NCBP2-AS2Q69YL0 99 aa21.86■■□□□ 1.09
CPNE1-204ENST00000397443 POTEHQ6S545 545 aa21.86■■□□□ 1.09
CPNE1-204ENST00000397443 UBXN4Q92575 508 aa21.86■■□□□ 1.09
CPNE1-204ENST00000397443 P3H4Q92791 437 aa21.86■■□□□ 1.09
CPNE1-204ENST00000397443 TBC1D31Q96DN5 1066 aa21.86■■□□□ 1.09
CPNE1-204ENST00000397443 MYEOVQ96EZ4 313 aa21.86■■□□□ 1.09
CPNE1-204ENST00000397443 LRRC1Q9BTT6 524 aa21.86■■□□□ 1.09
CPNE1-204ENST00000397443 TMEM51Q9NW97 253 aa21.86■■□□□ 1.09
CPNE1-204ENST00000397443 AGO1Q9UL18 857 aaKnown RBP21.86■■□□□ 1.09
CPNE1-204ENST00000397443 DNPEPQ9ULA0 475 aa21.86■■□□□ 1.09
CPNE1-204ENST00000397443 ZNF487B1APH4 448 aa21.86■■□□□ 1.09
CPNE1-204ENST00000397443 POU2F2P09086 479 aa21.86■■□□□ 1.09
CPNE1-204ENST00000397443 SLC7A9P82251 487 aa21.86■■□□□ 1.09
CPNE1-204ENST00000397443 ADAM15Q13444 863 aa21.86■■□□□ 1.09
CPNE1-204ENST00000397443 FBXL22Q6P050 247 aa21.86■■□□□ 1.09
CPNE1-204ENST00000397443 CCDC137Q6PK04 289 aaKnown RBP21.86■■□□□ 1.09
CPNE1-204ENST00000397443 LRRC31Q6UY01 552 aa21.86■■□□□ 1.09
CPNE1-204ENST00000397443 ZC3H18Q86VM9 953 aaKnown RBP21.86■■□□□ 1.09
CPNE1-204ENST00000397443 CIR1Q86X95 450 aaPredicted RBP21.86■■□□□ 1.09
CPNE1-204ENST00000397443 CCDC105Q8IYK2 499 aa21.86■■□□□ 1.09
CPNE1-204ENST00000397443 C1orf74Q96LT6 269 aa21.86■■□□□ 1.09
CPNE1-204ENST00000397443 CCDC114Q96M63 670 aa21.86■■□□□ 1.09
CPNE1-204ENST00000397443 LMCD1Q9NZU5 365 aa21.86■■□□□ 1.09
CPNE1-204ENST00000397443 TMEM265A0A087WTH1 108 aa21.85■■□□□ 1.09
CPNE1-204ENST00000397443 TACR2P21452 398 aa21.85■■□□□ 1.09
CPNE1-204ENST00000397443 SLC6A4P31645 630 aa21.85■■□□□ 1.09
CPNE1-204ENST00000397443 VCPP55072 806 aaKnown RBP21.85■■□□□ 1.09
CPNE1-204ENST00000397443 SLC7A5Q01650 507 aa21.85■■□□□ 1.09
CPNE1-204ENST00000397443 FAM133BQ5BKY9 247 aaKnown RBP21.85■■□□□ 1.09
CPNE1-204ENST00000397443 C8orf74Q6P047 294 aa21.85■■□□□ 1.09
CPNE1-204ENST00000397443 TMCO3Q6UWJ1 677 aa21.85■■□□□ 1.09
CPNE1-204ENST00000397443 TMEM184AQ6ZMB5 413 aa21.85■■□□□ 1.09
CPNE1-204ENST00000397443 LGI2Q8N0V4 545 aa21.85■■□□□ 1.09
CPNE1-204ENST00000397443 CFAP52Q8N1V2 620 aa21.85■■□□□ 1.09
CPNE1-204ENST00000397443 MMGT1Q8N4V1 131 aa21.85■■□□□ 1.09
CPNE1-204ENST00000397443 ST13P5Q8NFI4 369 aaPredicted RBP21.85■■□□□ 1.09
CPNE1-204ENST00000397443 IGSF8Q969P0 613 aa21.85■■□□□ 1.09
CPNE1-204ENST00000397443 RPRD1AQ96P16 312 aaPredicted RBP21.85■■□□□ 1.09
CPNE1-204ENST00000397443 NEU3Q9UQ49 428 aa21.85■■□□□ 1.09
CPNE1-204ENST00000397443 SH3BP1Q9Y3L3 701 aa21.85■■□□□ 1.09
CPNE1-204ENST00000397443 LEFTY2O00292 366 aa21.84■■□□□ 1.09
CPNE1-204ENST00000397443 DCLK1O15075 740 aa21.84■■□□□ 1.09
CPNE1-204ENST00000397443 MFSD11O43934 449 aa21.84■■□□□ 1.09
CPNE1-204ENST00000397443 TSPAN3O60637 253 aa21.84■■□□□ 1.09
CPNE1-204ENST00000397443 TBX10O75333 385 aa21.84■■□□□ 1.09
CPNE1-204ENST00000397443 PRAMEF12O95522 483 aa21.84■■□□□ 1.09
CPNE1-204ENST00000397443 DDX6P26196 483 aaKnown RBP eCLIP21.84■■□□□ 1.099e-13■■■■□ 20.8
CPNE1-204ENST00000397443 COILP38432 576 aaPredicted RBP21.84■■□□□ 1.09
CPNE1-204ENST00000397443 SLC10A2Q12908 348 aaPredicted RBP21.84■■□□□ 1.09
CPNE1-204ENST00000397443 MANEALQ5VSG8 457 aa21.84■■□□□ 1.09
CPNE1-204ENST00000397443 GET4Q7L5D6 327 aaPredicted RBP21.84■■□□□ 1.09
CPNE1-204ENST00000397443 TFAP2DQ7Z6R9 452 aa21.84■■□□□ 1.09
CPNE1-204ENST00000397443 GPR149Q86SP6 731 aa21.84■■□□□ 1.09
CPNE1-204ENST00000397443 SH3RF2Q8TEC5 729 aa21.84■■□□□ 1.09
CPNE1-204ENST00000397443 PRMT1Q99873 361 aaKnown RBP21.84■■□□□ 1.09
CPNE1-204ENST00000397443 CLEC1BQ9P126 229 aa21.84■■□□□ 1.09
CPNE1-204ENST00000397443 F5H5T6 163 aa21.84■■□□□ 1.09
CPNE1-204ENST00000397443 RAD51CO43502 376 aa21.84■■□□□ 1.09
CPNE1-204ENST00000397443 LIASO43766 372 aa21.84■■□□□ 1.09
CPNE1-204ENST00000397443 ZFXP17010 805 aaPredicted RBP21.84■■□□□ 1.09
CPNE1-204ENST00000397443 TGM2P21980 687 aa21.84■■□□□ 1.09
CPNE1-204ENST00000397443 FSHRP23945 695 aa21.84■■□□□ 1.09
CPNE1-204ENST00000397443 CHRNA3P32297 505 aa21.84■■□□□ 1.09
CPNE1-204ENST00000397443 HCAR3P49019 387 aa21.84■■□□□ 1.09
CPNE1-204ENST00000397443 CCNG2Q16589 344 aa21.84■■□□□ 1.09
CPNE1-204ENST00000397443 CYP1B1Q16678 543 aa21.84■■□□□ 1.09
CPNE1-204ENST00000397443 FAM182AQ5T1J6 154 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms