RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 SRGAP2O75044 1071 aa24.39■■□□□ 1.5
TSPAN4-203ENST00000397397 KRT1P04264 644 aa24.39■■□□□ 1.5
TSPAN4-203ENST00000397397 L1CAMP32004 1257 aa24.39■■□□□ 1.5
TSPAN4-203ENST00000397397 CDH6P55285 790 aa24.39■■□□□ 1.5
TSPAN4-203ENST00000397397 PDGFRLQ15198 375 aa24.39■■□□□ 1.5
TSPAN4-203ENST00000397397 EML3Q32P44 896 aa24.39■■□□□ 1.5
TSPAN4-203ENST00000397397 ODF2Q5BJF6 829 aa24.39■■□□□ 1.5
TSPAN4-203ENST00000397397 PPP6R3Q5H9R7 873 aaPredicted RBP24.39■■□□□ 1.5
TSPAN4-203ENST00000397397 KCTD6Q8NC69 237 aa24.39■■□□□ 1.5
TSPAN4-203ENST00000397397 FAM83CQ9BQN1 747 aa24.39■■□□□ 1.5
TSPAN4-203ENST00000397397 E9PAM4 449 aa24.38■■□□□ 1.49
TSPAN4-203ENST00000397397 FAM72CH0Y354 149 aa24.38■■□□□ 1.49
TSPAN4-203ENST00000397397 CHADO15335 359 aa24.38■■□□□ 1.49
TSPAN4-203ENST00000397397 CREB3O43889 395 aa24.38■■□□□ 1.49
TSPAN4-203ENST00000397397 ASGR2P07307 311 aa24.38■■□□□ 1.49
TSPAN4-203ENST00000397397 DNA2P51530 1060 aa24.38■■□□□ 1.49
TSPAN4-203ENST00000397397 NRG1Q02297 640 aaPredicted RBP24.38■■□□□ 1.49
TSPAN4-203ENST00000397397 DPYSL2Q16555 572 aa24.38■■□□□ 1.49
TSPAN4-203ENST00000397397 FAM72AQ5TYM5 149 aa24.38■■□□□ 1.49
TSPAN4-203ENST00000397397 FAM72DQ6L9T8 149 aa24.38■■□□□ 1.49
TSPAN4-203ENST00000397397 FBXL22Q6P050 247 aa24.38■■□□□ 1.49
TSPAN4-203ENST00000397397 LRRC31Q6UY01 552 aa24.38■■□□□ 1.49
TSPAN4-203ENST00000397397 FAM72BQ86X60 149 aa24.38■■□□□ 1.49
TSPAN4-203ENST00000397397 ADGRG2Q8IZP9 1017 aa24.38■■□□□ 1.49
TSPAN4-203ENST00000397397 UBL4BQ8N7F7 174 aa24.38■■□□□ 1.49
TSPAN4-203ENST00000397397 UBE2Q2Q8WVN8 375 aa24.38■■□□□ 1.49
TSPAN4-203ENST00000397397 HES6Q96HZ4 224 aa24.38■■□□□ 1.49
TSPAN4-203ENST00000397397 EPAS1Q99814 870 aa24.38■■□□□ 1.49
TSPAN4-203ENST00000397397 NFATC1O95644 943 aa24.37■■□□□ 1.49
TSPAN4-203ENST00000397397 ARSAP15289 507 aa24.37■■□□□ 1.49
TSPAN4-203ENST00000397397 RPS6KA1Q15418 735 aa24.37■■□□□ 1.49
TSPAN4-203ENST00000397397 TPGS1Q6ZTW0 290 aa24.37■■□□□ 1.49
TSPAN4-203ENST00000397397 KATNAL2Q8IYT4 538 aa24.37■■□□□ 1.49
TSPAN4-203ENST00000397397 SLC44A3Q8N4M1 653 aa24.37■■□□□ 1.49
TSPAN4-203ENST00000397397 RAPGEF5Q92565 580 aa24.37■■□□□ 1.49
TSPAN4-203ENST00000397397 ATP2A3Q93084 1043 aa24.37■■□□□ 1.49
TSPAN4-203ENST00000397397 MYEOVQ96EZ4 313 aa24.37■■□□□ 1.49
TSPAN4-203ENST00000397397 RPRD1AQ96P16 312 aaPredicted RBP24.37■■□□□ 1.49
TSPAN4-203ENST00000397397 EBF3Q9H4W6 596 aa24.37■■□□□ 1.49
TSPAN4-203ENST00000397397 BRD9Q9H8M2 597 aa24.37■■□□□ 1.49
TSPAN4-203ENST00000397397 PCDH18Q9HCL0 1135 aa24.37■■□□□ 1.49
TSPAN4-203ENST00000397397 LRRD1A4D1F6 860 aa24.36■■□□□ 1.49
TSPAN4-203ENST00000397397 PI4K2BG5E9Z4 385 aa24.36■■□□□ 1.49
TSPAN4-203ENST00000397397 DDX3YO15523 660 aaKnown RBP24.36■■□□□ 1.49
TSPAN4-203ENST00000397397 LRIG2O94898 1065 aa24.36■■□□□ 1.49
TSPAN4-203ENST00000397397 PEX5P50542 639 aa24.36■■□□□ 1.49
TSPAN4-203ENST00000397397 ARSEP51690 589 aa24.36■■□□□ 1.49
TSPAN4-203ENST00000397397 SEMA3BQ13214 749 aa24.36■■□□□ 1.49
TSPAN4-203ENST00000397397 PDK2Q15119 407 aa24.36■■□□□ 1.49
TSPAN4-203ENST00000397397 RABGAP1LQ5R372 815 aa24.36■■□□□ 1.49
TSPAN4-203ENST00000397397 MAP7D3Q8IWC1 876 aa24.36■■□□□ 1.49
TSPAN4-203ENST00000397397 ZNF683Q8IZ20 524 aa24.36■■□□□ 1.49
TSPAN4-203ENST00000397397 IRF7Q92985 503 aa24.36■■□□□ 1.49
TSPAN4-203ENST00000397397 IGSF8Q969P0 613 aa24.36■■□□□ 1.49
TSPAN4-203ENST00000397397 TMA16Q96EY4 203 aaKnown RBP24.36■■□□□ 1.49
TSPAN4-203ENST00000397397 PRICKLE1Q96MT3 831 aaPredicted RBP24.36■■□□□ 1.49
TSPAN4-203ENST00000397397 SPHK2Q9NRA0 654 aa24.36■■□□□ 1.49
TSPAN4-203ENST00000397397 JRKLQ9Y4A0 524 aa24.36■■□□□ 1.49
TSPAN4-203ENST00000397397 EEF2KO00418 725 aaKnown RBP24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 GFRA2O00451 464 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 CYBBP04839 570 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 CD48P09326 243 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 KDELR1P24390 212 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 ARL4AP40617 200 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 SGSHP51688 502 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 RWDD2BP57060 319 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 TPI1P60174 286 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 TNK2Q07912 1038 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 DHCR24Q15392 516 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 MPPE1Q53F39 396 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 LY6G5CQ5SRR4 150 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 MANEALQ5VSG8 457 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 RWDD4Q6NW29 188 aaKnown RBP24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 TMEM25Q86YD3 366 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 CFAP52Q8N1V2 620 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 HJURPQ8NCD3 748 aaPredicted RBP24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 DDI1Q8WTU0 396 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 ALG3Q92685 438 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 RNF25Q96BH1 459 aaPredicted RBP24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 TBC1D31Q96DN5 1066 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 HPS4Q9NQG7 708 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 MYO10Q9HD67 2058 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 MUC3AQ02505 3323 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 TTC28Q96AY4 2481 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 TYW5A2RUC4 315 aaKnown RBP24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 C19orf67A6NJJ6 358 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 H3BRJ5 948 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 ENC1O14682 589 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 TBL1XO60907 577 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 ZRANB2O95218 330 aaKnown RBP eCLIP24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 CYP17A1P05093 508 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 GOT1P17174 413 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 ZNF135P52742 658 aaPredicted RBP24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 RPS24P62847 133 aaKnown RBP24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 DPYSL3Q14195 570 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 ANO4Q32M45 955 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 RHBDF2Q6PJF5 856 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 RCOR2Q8IZ40 523 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 EXD1Q8NHP7 514 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 FAM71BQ8TC56 605 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms