RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 E2F7Q96AV8 911 aa24.34■■□□□ 1.49
TSPAN4-202ENST00000397396 MS4A14Q96JA4 679 aa24.34■■□□□ 1.49
TSPAN4-202ENST00000397396 OBP2AQ9NY56 170 aa24.34■■□□□ 1.49
TSPAN4-202ENST00000397396 AGO1Q9UL18 857 aaKnown RBP24.34■■□□□ 1.49
TSPAN4-202ENST00000397396 HELZP42694 1942 aaKnown RBP24.33■■□□□ 1.49
TSPAN4-202ENST00000397396 TYW5A2RUC4 315 aaKnown RBP24.33■■□□□ 1.48
TSPAN4-202ENST00000397396 TACR2P21452 398 aa24.33■■□□□ 1.48
TSPAN4-202ENST00000397396 TGM2P21980 687 aa24.33■■□□□ 1.48
TSPAN4-202ENST00000397396 EPHB2P29323 1055 aa24.33■■□□□ 1.48
TSPAN4-202ENST00000397396 CHKAP35790 457 aa24.33■■□□□ 1.48
TSPAN4-202ENST00000397396 AUHQ13825 339 aaKnown RBP24.33■■□□□ 1.48
TSPAN4-202ENST00000397396 RAP1GAP2Q684P5 730 aa24.33■■□□□ 1.48
TSPAN4-202ENST00000397396 SLC9A4Q6AI14 798 aa24.33■■□□□ 1.48
TSPAN4-202ENST00000397396 ARID3BQ8IVW6 561 aaPredicted RBP24.33■■□□□ 1.48
TSPAN4-202ENST00000397396 DEFB123Q8N688 67 aa24.33■■□□□ 1.48
TSPAN4-202ENST00000397396 ADAMTS19Q8TE59 1207 aa24.33■■□□□ 1.48
TSPAN4-202ENST00000397396 SMARCD2Q92925 531 aa24.33■■□□□ 1.48
TSPAN4-202ENST00000397396 PRMT1Q99873 361 aaKnown RBP24.33■■□□□ 1.48
TSPAN4-202ENST00000397396 HEMGNQ9BXL5 484 aa24.33■■□□□ 1.48
TSPAN4-202ENST00000397396 TBC1D14Q9P2M4 693 aa24.33■■□□□ 1.48
TSPAN4-202ENST00000397396 XPO7Q9UIA9 1087 aaKnown RBP24.33■■□□□ 1.48
TSPAN4-202ENST00000397396 NUP210Q8TEM1 1887 aaPredicted RBP24.32■■□□□ 1.48
TSPAN4-202ENST00000397396 CTAGE15A4D2H0 777 aa24.32■■□□□ 1.48
TSPAN4-202ENST00000397396 CCDC188H7C350 402 aa24.32■■□□□ 1.48
TSPAN4-202ENST00000397396 KRIT1O00522 736 aa24.32■■□□□ 1.48
TSPAN4-202ENST00000397396 SLC9A3R1O14745 358 aaPredicted RBP24.32■■□□□ 1.48
TSPAN4-202ENST00000397396 CST8O60676 142 aa24.32■■□□□ 1.48
TSPAN4-202ENST00000397396 CTAGE8P0CG41 777 aa24.32■■□□□ 1.48
TSPAN4-202ENST00000397396 KRT10P13645 584 aa24.32■■□□□ 1.48
TSPAN4-202ENST00000397396 IL4RP24394 825 aa24.32■■□□□ 1.48
TSPAN4-202ENST00000397396 SERPINB6P35237 376 aa24.32■■□□□ 1.48
TSPAN4-202ENST00000397396 KLF1Q13351 362 aaPredicted RBP24.32■■□□□ 1.48
TSPAN4-202ENST00000397396 DPYSQ14117 519 aa24.32■■□□□ 1.48
TSPAN4-202ENST00000397396 ZNF77Q15935 545 aa24.32■■□□□ 1.48
TSPAN4-202ENST00000397396 BZW1Q7L1Q6 419 aaKnown RBP24.32■■□□□ 1.48
TSPAN4-202ENST00000397396 CTAGE6Q86UF2 777 aa24.32■■□□□ 1.48
TSPAN4-202ENST00000397396 CTAGE4Q8IX94 777 aa24.32■■□□□ 1.48
TSPAN4-202ENST00000397396 CPXM2Q8N436 756 aa24.32■■□□□ 1.48
TSPAN4-202ENST00000397396 OTUB2Q96DC9 234 aa24.32■■□□□ 1.48
TSPAN4-202ENST00000397396 ZYG11BQ9C0D3 744 aa24.32■■□□□ 1.48
TSPAN4-202ENST00000397396 TRPV4Q9HBA0 871 aa24.32■■□□□ 1.48
TSPAN4-202ENST00000397396 ARHGEF4Q9NR80 690 aa24.32■■□□□ 1.48
TSPAN4-202ENST00000397396 IGLV3-10A0A075B6K4 115 aa24.31■■□□□ 1.48
TSPAN4-202ENST00000397396 FAM72CH0Y354 149 aa24.31■■□□□ 1.48
TSPAN4-202ENST00000397396 APOC4-APOC2K7ER74 178 aa24.31■■□□□ 1.48
TSPAN4-202ENST00000397396 APOC2P02655 101 aa24.31■■□□□ 1.48
TSPAN4-202ENST00000397396 KLKB1P03952 638 aa24.31■■□□□ 1.48
TSPAN4-202ENST00000397396 MMRN1Q13201 1228 aa24.31■■□□□ 1.48
TSPAN4-202ENST00000397396 FAM133BQ5BKY9 247 aaKnown RBP24.31■■□□□ 1.48
TSPAN4-202ENST00000397396 FAM72AQ5TYM5 149 aa24.31■■□□□ 1.48
TSPAN4-202ENST00000397396 FAM72DQ6L9T8 149 aa24.31■■□□□ 1.48
TSPAN4-202ENST00000397396 RWDD4Q6NW29 188 aaKnown RBP24.31■■□□□ 1.48
TSPAN4-202ENST00000397396 TMCO3Q6UWJ1 677 aa24.31■■□□□ 1.48
TSPAN4-202ENST00000397396 FAM72BQ86X60 149 aa24.31■■□□□ 1.48
TSPAN4-202ENST00000397396 FAM217AQ8IXS0 508 aa24.31■■□□□ 1.48
TSPAN4-202ENST00000397396 PCDH19Q8TAB3 1148 aa24.31■■□□□ 1.48
TSPAN4-202ENST00000397396 ASB16Q96NS5 453 aa24.31■■□□□ 1.48
TSPAN4-202ENST00000397396 RPRD1AQ96P16 312 aaPredicted RBP24.31■■□□□ 1.48
TSPAN4-202ENST00000397396 UBE2ZQ9H832 354 aaPredicted RBP24.31■■□□□ 1.48
TSPAN4-202ENST00000397396 VANGL2Q9ULK5 521 aa24.31■■□□□ 1.48
TSPAN4-202ENST00000397396 CDH23Q9H251 3354 aa24.31■■□□□ 1.48
TSPAN4-202ENST00000397396 DRGXA6NNA5 263 aa24.3■■□□□ 1.48
TSPAN4-202ENST00000397396 GREM1O60565 184 aa24.3■■□□□ 1.48
TSPAN4-202ENST00000397396 PRAMEF12O95522 483 aa24.3■■□□□ 1.48
TSPAN4-202ENST00000397396 NR2C2P49116 596 aa24.3■■□□□ 1.48
TSPAN4-202ENST00000397396 ZXDBP98169 803 aa24.3■■□□□ 1.48
TSPAN4-202ENST00000397396 CBX2Q14781 532 aaPredicted RBP24.3■■□□□ 1.48
TSPAN4-202ENST00000397396 SKIV2LQ15477 1246 aaKnown RBP24.3■■□□□ 1.48
TSPAN4-202ENST00000397396 C5orf22Q49AR2 442 aa24.3■■□□□ 1.48
TSPAN4-202ENST00000397396 NADSYN1Q6IA69 706 aa24.3■■□□□ 1.48
TSPAN4-202ENST00000397396 FBXL22Q6P050 247 aa24.3■■□□□ 1.48
TSPAN4-202ENST00000397396 Q7L0L9 218 aa24.3■■□□□ 1.48
TSPAN4-202ENST00000397396 LZTR1Q8N653 840 aa24.3■■□□□ 1.48
TSPAN4-202ENST00000397396 SUSD6Q92537 303 aa24.3■■□□□ 1.48
TSPAN4-202ENST00000397396 ZSWIM3Q96MP5 696 aa24.3■■□□□ 1.48
TSPAN4-202ENST00000397396 RUNDC3BQ96NL0 473 aa24.3■■□□□ 1.48
TSPAN4-202ENST00000397396 GUCD1Q96NT3 240 aa24.3■■□□□ 1.48
TSPAN4-202ENST00000397396 SMG9Q9H0W8 520 aaKnown RBP24.3■■□□□ 1.48
TSPAN4-202ENST00000397396 RAD54BQ9Y620 910 aa24.3■■□□□ 1.48
TSPAN4-202ENST00000397396 DOCK6Q96HP0 2047 aa24.3■■□□□ 1.48
TSPAN4-202ENST00000397396 WASH4PA8MWX3 477 aa24.29■■□□□ 1.48
TSPAN4-202ENST00000397396 ZNF189O75820 626 aaPredicted RBP24.29■■□□□ 1.48
TSPAN4-202ENST00000397396 RHOQP17081 205 aa24.29■■□□□ 1.48
TSPAN4-202ENST00000397396 ERCC2P18074 760 aa24.29■■□□□ 1.48
TSPAN4-202ENST00000397396 GGCXP38435 758 aa24.29■■□□□ 1.48
TSPAN4-202ENST00000397396 SMAD4Q13485 552 aaKnown RBP24.29■■□□□ 1.48
TSPAN4-202ENST00000397396 ANKS1BQ7Z6G8 1248 aa24.29■■□□□ 1.48
TSPAN4-202ENST00000397396 ZNF683Q8IZ20 524 aa24.29■■□□□ 1.48
TSPAN4-202ENST00000397396 LGI2Q8N0V4 545 aa24.29■■□□□ 1.48
TSPAN4-202ENST00000397396 PQLC3Q8N755 202 aa24.29■■□□□ 1.48
TSPAN4-202ENST00000397396 SPATA4Q8NEY3 305 aa24.29■■□□□ 1.48
TSPAN4-202ENST00000397396 P3H4Q92791 437 aa24.29■■□□□ 1.48
TSPAN4-202ENST00000397396 MAGEB5Q9BZ81 275 aa24.29■■□□□ 1.48
TSPAN4-202ENST00000397396 CCL26Q9Y258 94 aa24.29■■□□□ 1.48
TSPAN4-202ENST00000397396 USP15Q9Y4E8 981 aaPredicted RBP24.29■■□□□ 1.48
TSPAN4-202ENST00000397396 SNX10Q9Y5X0 201 aa24.29■■□□□ 1.48
TSPAN4-202ENST00000397396 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.28■■□□□ 1.48
TSPAN4-202ENST00000397396 PDE2AO00408 941 aaPredicted RBP24.28■■□□□ 1.48
TSPAN4-202ENST00000397396 DCLK1O15075 740 aa24.28■■□□□ 1.48
TSPAN4-202ENST00000397396 AMPD1P23109 780 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms