RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 LRRC3Q9BY71 257 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 ZWILCHQ9H900 591 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 TLR8Q9NR97 1041 aaKnown RBP13.75□□□□□ -0.21
SEC13-209ENST00000397117 DDX56Q9NY93 547 aaKnown RBP13.75□□□□□ -0.21
SEC13-209ENST00000397117 GMIPQ9P107 970 aa13.75□□□□□ -0.21
SEC13-209ENST00000397117 SYNJ2BP-COX16A0A087WUM0 186 aa13.74□□□□□ -0.21
SEC13-209ENST00000397117 FAM92AA1XBS5 289 aa13.74□□□□□ -0.21
SEC13-209ENST00000397117 HEPACAM2A8MVW5 462 aa13.74□□□□□ -0.21
SEC13-209ENST00000397117 CHURC1-FNTBB4DL54 471 aa13.74□□□□□ -0.21
SEC13-209ENST00000397117 M0QYT0 321 aa13.74□□□□□ -0.21
SEC13-209ENST00000397117 RIOK3O14730 519 aaKnown RBP13.74□□□□□ -0.21
SEC13-209ENST00000397117 PAPSS2O95340 614 aaPredicted RBP13.74□□□□□ -0.21
SEC13-209ENST00000397117 FYNP06241 537 aa13.74□□□□□ -0.21
SEC13-209ENST00000397117 MYL4P12829 197 aa13.74□□□□□ -0.21
SEC13-209ENST00000397117 TCF4P15884 667 aa13.74□□□□□ -0.21
SEC13-209ENST00000397117 CETN2P41208 172 aa13.74□□□□□ -0.21
SEC13-209ENST00000397117 FNTBP49356 437 aa13.74□□□□□ -0.21
SEC13-209ENST00000397117 PSEN1P49768 467 aa13.74□□□□□ -0.21
SEC13-209ENST00000397117 SLC25A11Q02978 314 aaKnown RBP13.74□□□□□ -0.21
SEC13-209ENST00000397117 DMWDQ09019 674 aa13.74□□□□□ -0.21
SEC13-209ENST00000397117 TAF10Q12962 218 aa13.74□□□□□ -0.21
SEC13-209ENST00000397117 NME3Q13232 169 aa13.74□□□□□ -0.21
SEC13-209ENST00000397117 ZNF211Q13398 564 aaPredicted RBP13.74□□□□□ -0.21
SEC13-209ENST00000397117 CSRP2Q16527 193 aa13.74□□□□□ -0.21
SEC13-209ENST00000397117 PRR23BQ6ZRT6 265 aa13.74□□□□□ -0.21
SEC13-209ENST00000397117 SND1Q7KZF4 910 aaKnown RBP eCLIP13.74□□□□□ -0.213e-11■■■□□ 16.6
SEC13-209ENST00000397117 RSRC2Q7L4I2 434 aaKnown RBP13.74□□□□□ -0.21
SEC13-209ENST00000397117 ITIH5Q86UX2 942 aa13.74□□□□□ -0.21
SEC13-209ENST00000397117 CREG2Q8IUH2 290 aa13.74□□□□□ -0.21
SEC13-209ENST00000397117 CCDC50Q8IVM0 306 aa13.74□□□□□ -0.21
SEC13-209ENST00000397117 KATNAL2Q8IYT4 538 aa13.74□□□□□ -0.21
SEC13-209ENST00000397117 ARFGAP1Q8N6T3 406 aa13.74□□□□□ -0.21
SEC13-209ENST00000397117 CEP112Q8N8E3 955 aa13.74□□□□□ -0.21
SEC13-209ENST00000397117 MNS1Q8NEH6 495 aa13.74□□□□□ -0.21
SEC13-209ENST00000397117 SHKBP1Q8TBC3 707 aa13.74□□□□□ -0.21
SEC13-209ENST00000397117 CENPIQ92674 756 aaPredicted RBP13.74□□□□□ -0.21
SEC13-209ENST00000397117 E2F7Q96AV8 911 aa13.74□□□□□ -0.21
SEC13-209ENST00000397117 RSPRY1Q96DX4 576 aa13.74□□□□□ -0.21
SEC13-209ENST00000397117 NPY6RQ99463 290 aa13.74□□□□□ -0.21
SEC13-209ENST00000397117 FAM204AQ9H8W3 233 aa13.74□□□□□ -0.21
SEC13-209ENST00000397117 SEMA4GQ9NTN9 838 aa13.74□□□□□ -0.21
SEC13-209ENST00000397117 COX16Q9P0S2 106 aa13.74□□□□□ -0.21
SEC13-209ENST00000397117 K7ESF4 209 aa13.73□□□□□ -0.21
SEC13-209ENST00000397117 ZRANB2O95218 330 aaKnown RBP eCLIP13.73□□□□□ -0.21
SEC13-209ENST00000397117 TRUB2O95900 331 aaKnown RBP13.73□□□□□ -0.21
SEC13-209ENST00000397117 F9P00740 461 aa13.73□□□□□ -0.21
SEC13-209ENST00000397117 KRT1P04264 644 aa13.73□□□□□ -0.21
SEC13-209ENST00000397117 RALAP11233 206 aa13.73□□□□□ -0.21
SEC13-209ENST00000397117 TFE3P19532 575 aaPredicted RBP13.73□□□□□ -0.21
SEC13-209ENST00000397117 GBP1P32455 592 aa13.73□□□□□ -0.21
SEC13-209ENST00000397117 CNR2P34972 360 aa13.73□□□□□ -0.21
SEC13-209ENST00000397117 RDXP35241 583 aaKnown RBP13.73□□□□□ -0.21
SEC13-209ENST00000397117 HDAC4P56524 1084 aa13.73□□□□□ -0.21
SEC13-209ENST00000397117 DEUP1Q05D60 604 aa13.73□□□□□ -0.21
SEC13-209ENST00000397117 SIM2Q14190 667 aaPredicted RBP13.73□□□□□ -0.21
SEC13-209ENST00000397117 TEAD2Q15562 447 aa13.73□□□□□ -0.21
SEC13-209ENST00000397117 PPM1JQ5JR12 505 aa13.73□□□□□ -0.21
SEC13-209ENST00000397117 DCAF12L1Q5VU92 463 aa13.73□□□□□ -0.21
SEC13-209ENST00000397117 SCD5Q86SK9 330 aa13.73□□□□□ -0.21
SEC13-209ENST00000397117 MYRIPQ8NFW9 859 aa13.73□□□□□ -0.21
SEC13-209ENST00000397117 NT5C3BQ969T7 300 aa13.73□□□□□ -0.21
SEC13-209ENST00000397117 RBM41Q96IZ5 413 aaKnown RBP13.73□□□□□ -0.21
SEC13-209ENST00000397117 MS4A14Q96JA4 679 aa13.73□□□□□ -0.21
SEC13-209ENST00000397117 NAP1L3Q99457 506 aaPredicted RBP13.73□□□□□ -0.21
SEC13-209ENST00000397117 TTLL2Q9BWV7 592 aa13.73□□□□□ -0.21
SEC13-209ENST00000397117 ASAH2Q9NR71 780 aa13.73□□□□□ -0.21
SEC13-209ENST00000397117 DDIT4Q9NX09 232 aa13.73□□□□□ -0.21
SEC13-209ENST00000397117 CHD6Q8TD26 2715 aa13.73□□□□□ -0.21
SEC13-209ENST00000397117 GREB1Q4ZG55 1949 aa13.73□□□□□ -0.21
SEC13-209ENST00000397117 KIF26AQ9ULI4 1882 aaPredicted RBP13.73□□□□□ -0.21
SEC13-209ENST00000397117 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.72□□□□□ -0.21
SEC13-209ENST00000397117 PGRMC1O00264 195 aaKnown RBP13.72□□□□□ -0.21
SEC13-209ENST00000397117 CHADO15335 359 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 PYGMP11217 842 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 IL1R2P27930 398 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 SRSF5Q13243 272 aaKnown RBP13.72□□□□□ -0.21
SEC13-209ENST00000397117 ST3GAL2Q16842 350 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 SMTNL2Q2TAL5 461 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 BOLA3Q53S33 107 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 KCNT1Q5JUK3 1230 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 PRR23CQ6ZRP0 262 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 RCOR2Q8IZ40 523 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 KCTD6Q8NC69 237 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 PDZD8Q8NEN9 1154 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 EXD1Q8NHP7 514 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 ADAM32Q8TC27 787 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 ACTRT1Q8TDG2 376 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 OVCA2Q8WZ82 227 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 HSPH1Q92598 858 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 MSANTD3Q96H12 275 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 CARD6Q9BX69 1037 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 C8orf33Q9H7E9 229 aaPredicted RBP13.72□□□□□ -0.21
SEC13-209ENST00000397117 NMUR1Q9HB89 426 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 CLIC5Q9NZA1 410 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 UXTQ9UBK9 157 aaPredicted RBP13.72□□□□□ -0.21
SEC13-209ENST00000397117 ASB3Q9Y575 518 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 NUP210Q8TEM1 1887 aaPredicted RBP13.72□□□□□ -0.21
SEC13-209ENST00000397117 CTAGE15A4D2H0 777 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 ENDOD1O94919 500 aa13.72□□□□□ -0.21
SEC13-209ENST00000397117 SLU7O95391 586 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms