RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 BCCIPQ9P287 314 aaKnown RBP eCLIP15.1■□□□□ 0.01
SEC13-208ENST00000397109 THAP10Q9P2Z0 257 aaPredicted RBP15.1■□□□□ 0.01
SEC13-208ENST00000397109 CLEC4EQ9ULY5 219 aa15.1■□□□□ 0.01
SEC13-208ENST00000397109 RALGAPA1Q6GYQ0 2036 aa15.1■□□□□ 0.01
SEC13-208ENST00000397109 GOLGA6L7A0A1B0GV03 622 aa15.09■□□□□ 0.01
SEC13-208ENST00000397109 TBL1XO60907 577 aa15.09■□□□□ 0.01
SEC13-208ENST00000397109 DAB1O75553 588 aa15.09■□□□□ 0.01
SEC13-208ENST00000397109 MOCS2O96007 188 aaPredicted RBP15.09■□□□□ 0.01
SEC13-208ENST00000397109 MMEP08473 750 aa15.09■□□□□ 0.01
SEC13-208ENST00000397109 TPM1P09493 284 aa15.09■□□□□ 0.01
SEC13-208ENST00000397109 CCR1P32246 355 aa15.09■□□□□ 0.01
SEC13-208ENST00000397109 WASP42768 502 aa15.09■□□□□ 0.01
SEC13-208ENST00000397109 CDR2Q01850 454 aa15.09■□□□□ 0.01
SEC13-208ENST00000397109 ARID5AQ03989 594 aa15.09■□□□□ 0.01
SEC13-208ENST00000397109 PLK5Q496M5 336 aa15.09■□□□□ 0.01
SEC13-208ENST00000397109 ZC3H12AQ5D1E8 599 aaKnown RBP15.09■□□□□ 0.01
SEC13-208ENST00000397109 RNF43Q68DV7 783 aa15.09■□□□□ 0.01
SEC13-208ENST00000397109 NADSYN1Q6IA69 706 aa15.09■□□□□ 0.01
SEC13-208ENST00000397109 TRIM72Q6ZMU5 477 aa15.09■□□□□ 0.01
SEC13-208ENST00000397109 CCDC117Q8IWD4 279 aaPredicted RBP15.09■□□□□ 0.01
SEC13-208ENST00000397109 KIAA2013Q8IYS2 634 aa15.09■□□□□ 0.01
SEC13-208ENST00000397109 PGBD3Q8N328 593 aa15.09■□□□□ 0.01
SEC13-208ENST00000397109 OLIG1Q8TAK6 271 aa15.09■□□□□ 0.01
SEC13-208ENST00000397109 HMGB4Q8WW32 186 aa15.09■□□□□ 0.01
SEC13-208ENST00000397109 RNF34Q969K3 372 aa15.09■□□□□ 0.01
SEC13-208ENST00000397109 SPACA7Q96KW9 195 aa15.09■□□□□ 0.01
SEC13-208ENST00000397109 ACOX2Q99424 681 aa15.09■□□□□ 0.01
SEC13-208ENST00000397109 NUP58Q9BVL2 599 aa15.09■□□□□ 0.01
SEC13-208ENST00000397109 TPSD1Q9BZJ3 242 aa15.09■□□□□ 0.01
SEC13-208ENST00000397109 DDIT4Q9NX09 232 aa15.09■□□□□ 0.01
SEC13-208ENST00000397109 PYCARDQ9ULZ3 195 aa15.09■□□□□ 0.01
SEC13-208ENST00000397109 ABCA7Q8IZY2 2146 aa15.09■□□□□ 0.01
SEC13-208ENST00000397109 CFAP54Q96N23 3096 aa15.09■□□□□ 0.01
SEC13-208ENST00000397109 A0A1W2PQF6 199 aa15.08■□□□□ 0.01
SEC13-208ENST00000397109 A0A1W2PQJ5 194 aa15.08■□□□□ 0.01
SEC13-208ENST00000397109 FOXD2O60548 495 aaPredicted RBP15.08■□□□□ 0.01
SEC13-208ENST00000397109 GRAP2O75791 330 aa15.08■□□□□ 0.01
SEC13-208ENST00000397109 ABCB4P21439 1286 aa15.08■□□□□ 0.01
SEC13-208ENST00000397109 HLA-FP30511 346 aa15.08■□□□□ 0.01
SEC13-208ENST00000397109 SLC6A4P31645 630 aa15.08■□□□□ 0.01
SEC13-208ENST00000397109 MATKP42679 507 aa15.08■□□□□ 0.01
SEC13-208ENST00000397109 NOMO3P69849 1222 aa15.08■□□□□ 0.01
SEC13-208ENST00000397109 STARD3Q14849 445 aa15.08■□□□□ 0.01
SEC13-208ENST00000397109 MS4A13Q5J8X5 152 aa15.08■□□□□ 0.01
SEC13-208ENST00000397109 KIAA0907Q7Z7F0 614 aaPredicted RBP15.08■□□□□ 0.01
SEC13-208ENST00000397109 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.08■□□□□ 0.01
SEC13-208ENST00000397109 CIPCQ9C0C6 399 aa15.08■□□□□ 0.01
SEC13-208ENST00000397109 ABCB8Q9NUT2 735 aa15.08■□□□□ 0.01
SEC13-208ENST00000397109 CACNA2D2Q9NY47 1150 aa15.08■□□□□ 0.01
SEC13-208ENST00000397109 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.08■□□□□ 0.01
SEC13-208ENST00000397109 NOCTQ9UK39 431 aaKnown RBP15.08■□□□□ 0.01
SEC13-208ENST00000397109 STAP1Q9ULZ2 295 aa15.08■□□□□ 0.01
SEC13-208ENST00000397109 MYO6Q9UM54 1294 aa15.08■□□□□ 0.01
SEC13-208ENST00000397109 USP18Q9UMW8 372 aa15.08■□□□□ 0.01
SEC13-208ENST00000397109 PCDHGA5Q9Y5G8 931 aa15.08■□□□□ 0.01
SEC13-208ENST00000397109 STON1Q9Y6Q2 735 aa15.08■□□□□ 0.01
SEC13-208ENST00000397109 SPTBN4Q9H254 2564 aa15.08■□□□□ 0
SEC13-208ENST00000397109 KCNU1A8MYU2 1149 aa15.08■□□□□ 0
SEC13-208ENST00000397109 KIF2AO00139 706 aaPredicted RBP15.08■□□□□ 0
SEC13-208ENST00000397109 EPN2O95208 641 aa15.08■□□□□ 0
SEC13-208ENST00000397109 CCDC172P0C7W6 258 aa15.08■□□□□ 0
SEC13-208ENST00000397109 PABPC1P11940 636 aaKnown RBP15.08■□□□□ 0
SEC13-208ENST00000397109 P2RY2P41231 377 aa15.08■□□□□ 0
SEC13-208ENST00000397109 SGSHP51688 502 aa15.08■□□□□ 0
SEC13-208ENST00000397109 PITX1P78337 314 aaPredicted RBP15.08■□□□□ 0
SEC13-208ENST00000397109 ENPP2Q13822 863 aa15.08■□□□□ 0
SEC13-208ENST00000397109 NAA35Q5VZE5 725 aa15.08■□□□□ 0
SEC13-208ENST00000397109 CHST9Q7L1S5 443 aa15.08■□□□□ 0
SEC13-208ENST00000397109 CHSY1Q86X52 802 aa15.08■□□□□ 0
SEC13-208ENST00000397109 XYLT1Q86Y38 959 aa15.08■□□□□ 0
SEC13-208ENST00000397109 CNGA4Q8IV77 575 aa15.08■□□□□ 0
SEC13-208ENST00000397109 MFN1Q8IWA4 741 aa15.08■□□□□ 0
SEC13-208ENST00000397109 AHI1Q8N157 1196 aa15.08■□□□□ 0
SEC13-208ENST00000397109 FIBINQ8TAL6 211 aa15.08■□□□□ 0
SEC13-208ENST00000397109 CPA5Q8WXQ8 436 aa15.08■□□□□ 0
SEC13-208ENST00000397109 PANX2Q96RD6 677 aa15.08■□□□□ 0
SEC13-208ENST00000397109 NUCKS1Q9H1E3 243 aaKnown RBP15.08■□□□□ 0
SEC13-208ENST00000397109 DUSP15Q9H1R2 295 aaPredicted RBP15.08■□□□□ 0
SEC13-208ENST00000397109 STIM2Q9P246 746 aa15.08■□□□□ 0
SEC13-208ENST00000397109 GGA2Q9UJY4 613 aa15.08■□□□□ 0
SEC13-208ENST00000397109 PLA2G4CQ9UP65 541 aa15.08■□□□□ 0
SEC13-208ENST00000397109 FRYLO94915 3013 aa15.07■□□□□ 0
SEC13-208ENST00000397109 SYNJ2BP-COX16A0A087WUM0 186 aa15.07■□□□□ 0
SEC13-208ENST00000397109 AKR1B15C9JRZ8 316 aaPredicted RBP15.07■□□□□ 0
SEC13-208ENST00000397109 F5H5T6 163 aa15.07■□□□□ 0
SEC13-208ENST00000397109 M0QYT0 321 aa15.07■□□□□ 0
SEC13-208ENST00000397109 DCLK1O15075 740 aa15.07■□□□□ 0
SEC13-208ENST00000397109 ARHGAP6O43182 974 aa15.07■□□□□ 0
SEC13-208ENST00000397109 SYNCRIPO60506 623 aaKnown RBP15.07■□□□□ 0
SEC13-208ENST00000397109 F9P00740 461 aa15.07■□□□□ 0
SEC13-208ENST00000397109 CYP1A1P04798 512 aaPredicted RBP15.07■□□□□ 0
SEC13-208ENST00000397109 ATP5BP06576 529 aaKnown RBP15.07■□□□□ 0
SEC13-208ENST00000397109 GABRG2P18507 467 aa15.07■□□□□ 0
SEC13-208ENST00000397109 TACR2P21452 398 aa15.07■□□□□ 0
SEC13-208ENST00000397109 TGM1P22735 817 aa15.07■□□□□ 0
SEC13-208ENST00000397109 RNASE9P60153 205 aaKnown RBP15.07■□□□□ 0
SEC13-208ENST00000397109 RPS24P62847 133 aaKnown RBP15.07■□□□□ 0
SEC13-208ENST00000397109 FMO1Q01740 532 aa15.07■□□□□ 0
SEC13-208ENST00000397109 LMNB2Q03252 620 aa15.07■□□□□ 0
SEC13-208ENST00000397109 SPEM2Q0P670 501 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms