RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 MS4A13Q5J8X5 152 aa14.45□□□□□ -0.1
SEC13-204ENST00000397099 PPM1JQ5JR12 505 aa14.45□□□□□ -0.1
SEC13-204ENST00000397099 RABGAP1LQ5R372 815 aa14.45□□□□□ -0.1
SEC13-204ENST00000397099 SERPINA13PQ6UXR4 307 aa14.45□□□□□ -0.1
SEC13-204ENST00000397099 FAM183BPQ6ZVS7 135 aa14.45□□□□□ -0.1
SEC13-204ENST00000397099 SND1Q7KZF4 910 aaKnown RBP eCLIP14.45□□□□□ -0.1
SEC13-204ENST00000397099 MFN1Q8IWA4 741 aa14.45□□□□□ -0.1
SEC13-204ENST00000397099 DEFB106AQ8N104 65 aa14.45□□□□□ -0.1
SEC13-204ENST00000397099 KDM1BQ8NB78 822 aa14.45□□□□□ -0.1
SEC13-204ENST00000397099 NEK11Q8NG66 645 aa14.45□□□□□ -0.1
SEC13-204ENST00000397099 EPS8L1Q8TE68 723 aa14.45□□□□□ -0.1
SEC13-204ENST00000397099 RNF34Q969K3 372 aa14.45□□□□□ -0.1
SEC13-204ENST00000397099 ERGIC2Q96RQ1 377 aa14.45□□□□□ -0.1
SEC13-204ENST00000397099 GANQ9H2C0 597 aa14.45□□□□□ -0.1
SEC13-204ENST00000397099 CD248Q9HCU0 757 aa14.45□□□□□ -0.1
SEC13-204ENST00000397099 ABCB8Q9NUT2 735 aa14.45□□□□□ -0.1
SEC13-204ENST00000397099 CACNA2D2Q9NY47 1150 aa14.45□□□□□ -0.1
SEC13-204ENST00000397099 ABCA7Q8IZY2 2146 aa14.44□□□□□ -0.1
SEC13-204ENST00000397099 F5H5T6 163 aa14.44□□□□□ -0.1
SEC13-204ENST00000397099 CAVIN2O95810 425 aa14.44□□□□□ -0.1
SEC13-204ENST00000397099 HLA-FP30511 346 aa14.44□□□□□ -0.1
SEC13-204ENST00000397099 OXTRP30559 389 aa14.44□□□□□ -0.1
SEC13-204ENST00000397099 SOX5P35711 763 aa14.44□□□□□ -0.1
SEC13-204ENST00000397099 POLR2FP61218 127 aaKnown RBP14.44□□□□□ -0.1
SEC13-204ENST00000397099 CDR2Q01850 454 aa14.44□□□□□ -0.1
SEC13-204ENST00000397099 UBXN1Q04323 297 aa14.44□□□□□ -0.1
SEC13-204ENST00000397099 SFSWAPQ12872 951 aaKnown RBP14.44□□□□□ -0.1
SEC13-204ENST00000397099 CDH18Q13634 790 aa14.44□□□□□ -0.1
SEC13-204ENST00000397099 ZNF234Q14588 700 aa14.44□□□□□ -0.1
SEC13-204ENST00000397099 PTPN20Q4JDL3 420 aa14.44□□□□□ -0.1
SEC13-204ENST00000397099 ZC3H12AQ5D1E8 599 aaKnown RBP14.44□□□□□ -0.1
SEC13-204ENST00000397099 BRMS1LQ5PSV4 323 aa14.44□□□□□ -0.1
SEC13-204ENST00000397099 RFWD3Q6PCD5 774 aa14.44□□□□□ -0.1
SEC13-204ENST00000397099 CHST9Q7L1S5 443 aa14.44□□□□□ -0.1
SEC13-204ENST00000397099 CYP2U1Q7Z449 544 aa14.44□□□□□ -0.1
SEC13-204ENST00000397099 ADAM32Q8TC27 787 aa14.44□□□□□ -0.1
SEC13-204ENST00000397099 PGAP3Q96FM1 320 aaPredicted RBP14.44□□□□□ -0.1
SEC13-204ENST00000397099 PCMTD1Q96MG8 357 aaPredicted RBP14.44□□□□□ -0.1
SEC13-204ENST00000397099 ACOX2Q99424 681 aa14.44□□□□□ -0.1
SEC13-204ENST00000397099 FAM207AQ9NSI2 230 aaPredicted RBP14.44□□□□□ -0.1
SEC13-204ENST00000397099 DDIT4Q9NX09 232 aa14.44□□□□□ -0.1
SEC13-204ENST00000397099 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.44□□□□□ -0.1
SEC13-204ENST00000397099 CALCOCO1Q9P1Z2 691 aa14.44□□□□□ -0.1
SEC13-204ENST00000397099 KIAA1522Q9P206 1035 aaPredicted RBP14.44□□□□□ -0.1
SEC13-204ENST00000397099 SUN2Q9UH99 717 aa14.44□□□□□ -0.1
SEC13-204ENST00000397099 SIK3Q9Y2K2 1263 aa14.44□□□□□ -0.1
SEC13-204ENST00000397099 CEP192Q8TEP8 1941 aa14.44□□□□□ -0.1
SEC13-204ENST00000397099 LUC7L3O95232 432 aaKnown RBP14.43□□□□□ -0.1
SEC13-204ENST00000397099 MOCS2O96007 188 aaPredicted RBP14.43□□□□□ -0.1
SEC13-204ENST00000397099 ERBB2P04626 1255 aa14.43□□□□□ -0.1
SEC13-204ENST00000397099 PNMA6AP0CW24 399 aaPredicted RBP14.43□□□□□ -0.1
SEC13-204ENST00000397099 C7P10643 843 aa14.43□□□□□ -0.1
SEC13-204ENST00000397099 NDUFV2P19404 249 aa14.43□□□□□ -0.1
SEC13-204ENST00000397099 BCKDHBP21953 392 aa14.43□□□□□ -0.1
SEC13-204ENST00000397099 SLC6A4P31645 630 aa14.43□□□□□ -0.1
SEC13-204ENST00000397099 IL12RB1P42701 662 aa14.43□□□□□ -0.1
SEC13-204ENST00000397099 WASP42768 502 aa14.43□□□□□ -0.1
SEC13-204ENST00000397099 DHPSP49366 369 aaPredicted RBP14.43□□□□□ -0.1
SEC13-204ENST00000397099 JAM2P57087 298 aa14.43□□□□□ -0.1
SEC13-204ENST00000397099 ST8SIA6P61647 398 aa14.43□□□□□ -0.1
SEC13-204ENST00000397099 ZBTB16Q05516 673 aa14.43□□□□□ -0.1
SEC13-204ENST00000397099 SYCP1Q15431 976 aa14.43□□□□□ -0.1
SEC13-204ENST00000397099 FILIP1LQ4L180 1135 aa14.43□□□□□ -0.1
SEC13-204ENST00000397099 STPG1Q5TH74 334 aa14.43□□□□□ -0.1
SEC13-204ENST00000397099 MBLAC2Q68D91 279 aa14.43□□□□□ -0.1
SEC13-204ENST00000397099 NADSYN1Q6IA69 706 aa14.43□□□□□ -0.1
SEC13-204ENST00000397099 TCEAL6Q6IPX3 200 aa14.43□□□□□ -0.1
SEC13-204ENST00000397099 PPP1R2P3Q6NXS1 205 aa14.43□□□□□ -0.1
SEC13-204ENST00000397099 ADIPOR2Q86V24 386 aa14.43□□□□□ -0.1
SEC13-204ENST00000397099 CHSY1Q86X52 802 aa14.43□□□□□ -0.1
SEC13-204ENST00000397099 CEP76Q8TAP6 659 aa14.43□□□□□ -0.1
SEC13-204ENST00000397099 RLN3Q8WXF3 142 aa14.43□□□□□ -0.1
SEC13-204ENST00000397099 FOXJ1Q92949 421 aa14.43□□□□□ -0.1
SEC13-204ENST00000397099 TCEAL3Q969E4 200 aa14.43□□□□□ -0.1
SEC13-204ENST00000397099 P2RY11Q96G91 374 aa14.43□□□□□ -0.1
SEC13-204ENST00000397099 MRGPRX1Q96LB2 322 aa14.43□□□□□ -0.1
SEC13-204ENST00000397099 PRDM16Q9HAZ2 1276 aa14.43□□□□□ -0.1
SEC13-204ENST00000397099 RXFP3Q9NSD7 469 aa14.43□□□□□ -0.1
SEC13-204ENST00000397099 TMEM63CQ9P1W3 806 aa14.43□□□□□ -0.1
SEC13-204ENST00000397099 MYO6Q9UM54 1294 aa14.43□□□□□ -0.1
SEC13-204ENST00000397099 H0Y626 953 aa14.42□□□□□ -0.1
SEC13-204ENST00000397099 KHNYNO15037 678 aaKnown RBP14.42□□□□□ -0.1
SEC13-204ENST00000397099 EPHX1P07099 455 aa14.42□□□□□ -0.1
SEC13-204ENST00000397099 SRPRAP08240 638 aaKnown RBP14.42□□□□□ -0.1
SEC13-204ENST00000397099 ACADMP11310 421 aa14.42□□□□□ -0.1
SEC13-204ENST00000397099 TACR2P21452 398 aa14.42□□□□□ -0.1
SEC13-204ENST00000397099 TPM4P67936 248 aa14.42□□□□□ -0.1
SEC13-204ENST00000397099 NOMO3P69849 1222 aa14.42□□□□□ -0.1
SEC13-204ENST00000397099 RPL6Q02878 288 aaKnown RBP14.42□□□□□ -0.1
SEC13-204ENST00000397099 SULT2A1Q06520 285 aa14.42□□□□□ -0.1
SEC13-204ENST00000397099 CAMK2GQ13555 558 aaPredicted RBP14.42□□□□□ -0.1
SEC13-204ENST00000397099 ARID5BQ14865 1188 aa14.42□□□□□ -0.1
SEC13-204ENST00000397099 NCAPHQ15003 741 aa14.42□□□□□ -0.1
SEC13-204ENST00000397099 TAF5Q15542 800 aa14.42□□□□□ -0.1
SEC13-204ENST00000397099 KLHL40Q2TBA0 621 aa14.42□□□□□ -0.1
SEC13-204ENST00000397099 SLC25A52Q3SY17 297 aa14.42□□□□□ -0.1
SEC13-204ENST00000397099 FUT11Q495W5 492 aa14.42□□□□□ -0.1
SEC13-204ENST00000397099 ANO6Q4KMQ2 910 aa14.42□□□□□ -0.1
SEC13-204ENST00000397099 FNDC3BQ53EP0 1204 aaKnown RBP14.42□□□□□ -0.1
SEC13-204ENST00000397099 LYSMD4Q5XG99 296 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms