RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 RRN3Q9NYV6 651 aa14.27□□□□□ -0.12
COL4A3-202ENST00000396578 ABCA8O94911 1581 aa14.27□□□□□ -0.13
COL4A3-202ENST00000396578 FBXO21O94952 628 aa14.27□□□□□ -0.13
COL4A3-202ENST00000396578 CYP2F1P24903 491 aa14.27□□□□□ -0.13
COL4A3-202ENST00000396578 CD302Q8IX05 232 aa14.27□□□□□ -0.13
COL4A3-202ENST00000396578 TMC2Q8TDI7 906 aa14.27□□□□□ -0.13
COL4A3-202ENST00000396578 KHDRBS3O75525 346 aaKnown RBP14.27□□□□□ -0.13
COL4A3-202ENST00000396578 EGFRP00533 1210 aa14.27□□□□□ -0.13
COL4A3-202ENST00000396578 GPR15P49685 360 aa14.27□□□□□ -0.13
COL4A3-202ENST00000396578 SCARF1Q14162 830 aa14.27□□□□□ -0.13
COL4A3-202ENST00000396578 PRR5LQ6MZQ0 368 aa14.27□□□□□ -0.13
COL4A3-202ENST00000396578 USP49Q70CQ1 688 aa14.27□□□□□ -0.13
COL4A3-202ENST00000396578 ADGRF2Q8IZF7 708 aa14.27□□□□□ -0.13
COL4A3-202ENST00000396578 BHLHE22Q8NFJ8 381 aaPredicted RBP14.27□□□□□ -0.13
COL4A3-202ENST00000396578 IDH3BO43837 385 aa14.27□□□□□ -0.13
COL4A3-202ENST00000396578 KCNH1O95259 989 aa14.27□□□□□ -0.13
COL4A3-202ENST00000396578 NPY2RP49146 381 aa14.27□□□□□ -0.13
COL4A3-202ENST00000396578 HERVK_113P62684 666 aa14.27□□□□□ -0.13
COL4A3-202ENST00000396578 TEKT5Q96M29 485 aa14.27□□□□□ -0.13
COL4A3-202ENST00000396578 APOL2Q9BQE5 337 aa14.27□□□□□ -0.13
COL4A3-202ENST00000396578 NMRAL1Q9HBL8 299 aa14.27□□□□□ -0.13
COL4A3-202ENST00000396578 DSEQ9UL01 958 aa14.27□□□□□ -0.13
COL4A3-202ENST00000396578 UBE2QL1A1L167 161 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 CYP2R1Q6VVX0 501 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 OR56A4Q8NGH8 313 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 KIF20BQ96Q89 1820 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 DYNC1LI2O43237 492 aaPredicted RBP14.26□□□□□ -0.13
COL4A3-202ENST00000396578 RGS14O43566 566 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 SEC22BO75396 215 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 GSTT1P30711 240 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 NEK3P51956 506 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 ERMARDQ5T6L9 678 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 ZNF222Q9UK12 451 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 UBQLN1Q9UMX0 589 aaKnown RBP14.26□□□□□ -0.13
COL4A3-202ENST00000396578 WWP2O00308 870 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 CDK7P50613 346 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 LPIN1Q14693 890 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 NR1D2Q14995 579 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 CCDC185Q8N715 623 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 SEMA6AQ9H2E6 1030 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 ING4Q9UNL4 249 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 A0A1W2PRG6 482 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 NPR3P17342 541 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 ACO1P21399 889 aaKnown RBP14.26□□□□□ -0.13
COL4A3-202ENST00000396578 CYP24A1Q07973 514 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 DGCR6Q14129 220 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 PDIA6Q15084 440 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 PROSER1Q86XN7 944 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 AMER2Q8N7J2 671 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 AAASQ9NRG9 546 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 NAMPTP43490 491 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 TAF5Q15542 800 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 ZNF276Q8N554 614 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 CDRT15Q96T59 188 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 TMEM138Q9NPI0 162 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 CYP27B1O15528 508 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 FGFR2P21802 821 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 KPNA1P52294 538 aaPredicted RBP14.26□□□□□ -0.13
COL4A3-202ENST00000396578 SNAPC2Q13487 334 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 NANOGNBQ7Z5D8 188 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 TMC3Q7Z5M5 1100 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 CLYBLQ8N0X4 340 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 S100ZQ8WXG8 99 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 NFKBIZQ9BYH8 718 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 NLNQ9BYT8 704 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 NUDT5Q9UKK9 219 aa14.26□□□□□ -0.13
COL4A3-202ENST00000396578 A0A087X1B8 175 aa14.25□□□□□ -0.13
COL4A3-202ENST00000396578 MAPK10P53779 464 aa14.25□□□□□ -0.13
COL4A3-202ENST00000396578 TAF13Q15543 124 aa14.25□□□□□ -0.13
COL4A3-202ENST00000396578 VPS72Q15906 364 aa14.25□□□□□ -0.13
COL4A3-202ENST00000396578 KYAT3Q6YP21 454 aaKnown RBP14.25□□□□□ -0.13
COL4A3-202ENST00000396578 BBS4Q96RK4 519 aa14.25□□□□□ -0.13
COL4A3-202ENST00000396578 OSGEPL1Q9H4B0 414 aa14.25□□□□□ -0.13
COL4A3-202ENST00000396578 GMEB1Q9Y692 573 aa14.25□□□□□ -0.13
COL4A3-202ENST00000396578 DCXO43602 365 aa14.25□□□□□ -0.13
COL4A3-202ENST00000396578 PGAM1P18669 254 aa14.25□□□□□ -0.13
COL4A3-202ENST00000396578 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.25□□□□□ -0.13
COL4A3-202ENST00000396578 PYDC1Q8WXC3 89 aa14.25□□□□□ -0.13
COL4A3-202ENST00000396578 ZNF75CPQ92670 426 aaPredicted RBP14.25□□□□□ -0.13
COL4A3-202ENST00000396578 EPB41L1Q9H4G0 881 aa14.25□□□□□ -0.13
COL4A3-202ENST00000396578 ING3Q9NXR8 418 aa14.25□□□□□ -0.13
COL4A3-202ENST00000396578 INO80Q9ULG1 1556 aaPredicted RBP14.25□□□□□ -0.13
COL4A3-202ENST00000396578 ARF5P84085 180 aa14.25□□□□□ -0.13
COL4A3-202ENST00000396578 TSC22D1Q15714 1073 aa14.25□□□□□ -0.13
COL4A3-202ENST00000396578 CBWD3Q5JTY5 395 aa14.25□□□□□ -0.13
COL4A3-202ENST00000396578 CBWD5Q5RIA9 395 aa14.25□□□□□ -0.13
COL4A3-202ENST00000396578 AP3S1Q92572 193 aa14.25□□□□□ -0.13
COL4A3-202ENST00000396578 IQGAP3Q86VI3 1631 aa14.25□□□□□ -0.13
COL4A3-202ENST00000396578 GLI1P08151 1106 aa14.25□□□□□ -0.13
COL4A3-202ENST00000396578 ACLYP53396 1101 aa14.25□□□□□ -0.13
COL4A3-202ENST00000396578 CDK16Q00536 496 aa14.25□□□□□ -0.13
COL4A3-202ENST00000396578 ORC1Q13415 861 aa14.25□□□□□ -0.13
COL4A3-202ENST00000396578 PYDC2Q56P42 97 aa14.25□□□□□ -0.13
COL4A3-202ENST00000396578 COLEC11Q9BWP8 271 aa14.25□□□□□ -0.13
COL4A3-202ENST00000396578 ELP3Q9H9T3 547 aa14.25□□□□□ -0.13
COL4A3-202ENST00000396578 CLN6Q9NWW5 311 aa14.25□□□□□ -0.13
COL4A3-202ENST00000396578 GUCY1B2O75343 617 aa14.25□□□□□ -0.13
COL4A3-202ENST00000396578 ALDH5A1P51649 535 aaPredicted RBP14.25□□□□□ -0.13
COL4A3-202ENST00000396578 FBXO42Q6P3S6 717 aa14.25□□□□□ -0.13
COL4A3-202ENST00000396578 CYP20A1Q6UW02 462 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms