RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 PAN2Q504Q3 1202 aaKnown RBP5.58□□□□□ -1.52
VPS13C-204ENST00000395898 LENG9Q96B70 501 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 OSBPL10Q9BXB5 764 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 PACSIN1Q9BY11 444 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 MRPS26Q9BYN8 205 aaKnown RBP5.58□□□□□ -1.52
VPS13C-204ENST00000395898 POLR1EQ9GZS1 481 aaKnown RBP5.58□□□□□ -1.52
VPS13C-204ENST00000395898 CYP4F12Q9HCS2 524 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 NAALADL1Q9UQQ1 740 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 SNX13Q9Y5W8 968 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 SESN1Q9Y6P5 492 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 PNMA8CA0A1B0GUJ8 204 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 SMIM22K7EJ46 135 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 RGS14O43566 566 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 ATP6V1B1P15313 513 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 VEGFAP15692 232 aaPredicted RBP5.58□□□□□ -1.52
VPS13C-204ENST00000395898 KLRC2P26717 231 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 GTF2E2P29084 291 aaKnown RBP5.58□□□□□ -1.52
VPS13C-204ENST00000395898 NOS2P35228 1153 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 RAP1GAPP47736 663 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 TBL3Q12788 808 aaKnown RBP5.58□□□□□ -1.52
VPS13C-204ENST00000395898 TMC7Q7Z402 723 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 PALB2Q86YC2 1186 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 SLC44A2Q8IWA5 706 aaPredicted RBP5.58□□□□□ -1.52
VPS13C-204ENST00000395898 FBXO39Q8N4B4 442 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 SVOPQ8N4V2 548 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 KIAA0895Q8NCT3 520 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 APOL4Q9BPW4 351 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 RAD21L1Q9H4I0 556 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 RPRD1BQ9NQG5 326 aaKnown RBP5.58□□□□□ -1.52
VPS13C-204ENST00000395898 ARHGAP20Q9P2F6 1191 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 TFR2Q9UP52 801 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 FRMPD4Q14CM0 1322 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 C15orf38-AP3S2A0A0A6YYH1 394 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 PGAM1P18669 254 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 ATP6V1B2P21281 511 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 NUP62P37198 522 aaPredicted RBP5.58□□□□□ -1.52
VPS13C-204ENST00000395898 BCL2L1Q07817 233 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 INSCQ1MX18 579 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 TRMT11Q7Z4G4 463 aaKnown RBP5.58□□□□□ -1.52
VPS13C-204ENST00000395898 ARPINQ7Z6K5 226 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 LRRC34Q8IZ02 419 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 TMEM237Q96Q45 408 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 PDCD2LQ9BRP1 358 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 POPDC2Q9HBU9 364 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.58□□□□□ -1.52
VPS13C-204ENST00000395898 PCDHGC5Q9Y5F6 944 aa5.58□□□□□ -1.52
VPS13C-204ENST00000395898 ASTN2O75129 1339 aaPredicted RBP5.58□□□□□ -1.52
VPS13C-204ENST00000395898 CCDC189A1A4V9 331 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 CENPXA8MT69 81 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 PDZK1P1A8MUH7 402 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 APOC4-APOC2K7ER74 178 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 NR5A2O00482 541 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 XPO1O14980 1071 aaKnown RBP5.57□□□□□ -1.52
VPS13C-204ENST00000395898 KPNA5O15131 536 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 SGTAO43765 313 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 PCDH8O95206 1070 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 IGSF6O95976 241 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 APOC2P02655 101 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 ANXA6P08133 673 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 CNPP09543 421 aaKnown RBP5.57□□□□□ -1.52
VPS13C-204ENST00000395898 RAG1P15918 1043 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 SARSP49591 514 aaKnown RBP5.57□□□□□ -1.52
VPS13C-204ENST00000395898 PSEN1P49768 467 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 CSHL1Q14406 222 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 AADATQ8N5Z0 425 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 HIC2Q96JB3 615 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 INTS13Q9NVM9 706 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 LZTS1Q9Y250 596 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 SF3B1O75533 1304 aaKnown RBP eCLIP5.57□□□□□ -1.528e-6■■■■■ 107
VPS13C-204ENST00000395898 CNTNAP2Q9UHC6 1331 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 ARHGAP23Q9P227 1491 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 QSOX1O00391 747 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 XYLBO75191 536 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 PAICSP22234 425 aaKnown RBP5.57□□□□□ -1.52
VPS13C-204ENST00000395898 NOS3P29474 1203 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 HPCAL1P37235 193 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 CPA2P48052 419 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 OVGP1Q12889 678 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 ORC1Q13415 861 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 RRP1BQ14684 758 aaKnown RBP5.57□□□□□ -1.52
VPS13C-204ENST00000395898 OLFML2BQ68BL8 750 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 SCUBE3Q8IX30 993 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 FAM163AQ96GL9 167 aaPredicted RBP5.57□□□□□ -1.52
VPS13C-204ENST00000395898 SYT15Q9BQS2 421 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 OSGEPL1Q9H4B0 414 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 DNAJC16Q9Y2G8 782 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 EIF4E1BA6NMX2 242 aaKnown RBP5.57□□□□□ -1.52
VPS13C-204ENST00000395898 H7C0S8 307 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 TRIM16LQ309B1 348 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 SETMARQ53H47 684 aaPredicted RBP5.57□□□□□ -1.52
VPS13C-204ENST00000395898 MTDHQ86UE4 582 aaKnown RBP5.57□□□□□ -1.52
VPS13C-204ENST00000395898 MIER2Q8N344 545 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 ZNF614Q8N883 585 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 OR56A4Q8NGH8 313 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 HASPINQ8TF76 798 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 SGF29Q96ES7 293 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 TMEM134Q9H6X4 195 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 SNX8Q9Y5X2 465 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 E9PBE3 544 aa5.57□□□□□ -1.52
VPS13C-204ENST00000395898 WNT10BO00744 389 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms