RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 LENG9Q96B70 501 aa5.53□□□□□ -1.52
HMGB1P10-201ENST00000395823 SNX18Q96RF0 628 aa5.53□□□□□ -1.52
HMGB1P10-201ENST00000395823 LBHD1Q9BQE6 289 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P10-201ENST00000395823 MLST8Q9BVC4 326 aa5.53□□□□□ -1.52
HMGB1P10-201ENST00000395823 CTDSP1Q9GZU7 261 aa5.53□□□□□ -1.52
HMGB1P10-201ENST00000395823 BRF2Q9HAW0 419 aa5.53□□□□□ -1.52
HMGB1P10-201ENST00000395823 GPR34Q9UPC5 381 aa5.53□□□□□ -1.52
HMGB1P10-201ENST00000395823 CAMK2AQ9UQM7 478 aa5.53□□□□□ -1.52
HMGB1P10-201ENST00000395823 PIAS3Q9Y6X2 628 aa5.53□□□□□ -1.52
HMGB1P10-201ENST00000395823 PIPSLA2A3N6 862 aa5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 SH2D7A6NKC9 451 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 C17orf100A8MU93 164 aa5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 MPPED1O15442 326 aa5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 ANP32CO43423 234 aa5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 FIBPO43427 364 aa5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 ALDOAP04075 364 aaKnown RBP5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 PRPH2P23942 346 aa5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 CHMP24386 653 aa5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 FOLR3P41439 243 aa5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 MVDP53602 400 aa5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 B4GALNT1Q00973 533 aa5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 CCDC15Q0P6D6 951 aa5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 TBL3Q12788 808 aaKnown RBP5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 CAMK1Q14012 370 aa5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 SEC23BQ15437 767 aa5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 RNASE12Q5GAN4 147 aaKnown RBP5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 SPDYAQ5MJ70 313 aa5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 INO80CQ6PI98 192 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 SLC22A25Q6T423 547 aa5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 PARS2Q7L3T8 475 aaKnown RBP5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 PALM2Q8IXS6 379 aa5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 TTC9BQ8N6N2 239 aa5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 LINC01465Q8N7H1 131 aa5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 PDILTQ8N807 584 aa5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 NFKBIDQ8NI38 313 aa5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 C8orf49Q96NF6 230 aa5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 FSD1LQ9BXM9 530 aa5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 ARHGEF3Q9NR81 526 aa5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 SNX15Q9NRS6 342 aa5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 DUSP22Q9NRW4 184 aa5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 KRT84Q9NSB2 600 aa5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 THAP1Q9NVV9 213 aa5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 HDAC6Q9UBN7 1215 aa5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 TESMINQ9Y4I5 508 aa5.52□□□□□ -1.53
HMGB1P10-201ENST00000395823 KDM3AQ9Y4C1 1321 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 C3orf70A6NLC5 250 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 H0YIZ8 118 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 TNFSF14O43557 240 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 AHCYL1O43865 530 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 PEX1O43933 1283 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 TULP3O75386 442 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 PDE8BO95263 885 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 C1RP00736 705 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 CLEC3BP05452 202 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 ELFN1P0C7U0 828 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 APEHP13798 732 aaKnown RBP5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 TNNT1P13805 278 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 ENGP17813 658 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 HOXA5P20719 270 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 DUSP1P28562 367 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 CYP2C18P33260 490 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 STAT1P42224 750 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 HARS2P49590 506 aaKnown RBP5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 AGTR2P50052 363 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 SETQ01105 290 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 ZNF766Q5HY98 468 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 ABHD17BQ5VST6 288 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 LAIR1Q6GTX8 287 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 KIRREL2Q6UWL6 708 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 ZNF551Q7Z340 670 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 DIS3L2Q8IYB7 885 aaKnown RBP5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 ADGRF3Q8IZF5 1079 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 NGEFQ8N5V2 710 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 SNRNP27Q8WVK2 155 aaKnown RBP5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 RUFY2Q8WXA3 655 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 CINPQ9BW66 212 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 HDHD5Q9BXW7 423 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 ITPAQ9BY32 194 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 WDR11Q9BZH6 1224 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 INTS2Q9H0H0 1204 aaKnown RBP5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 LMAN2LQ9H0V9 348 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 GHITMQ9H3K2 345 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 PRKRIP1Q9H875 184 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 USP29Q9HBJ7 922 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 SERTAD4Q9NUC0 356 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 BEX4Q9NWD9 120 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 SEMA5BQ9P283 1151 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 KLQ9UEF7 1012 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 TBC1D29Q9UFV1 150 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 CCNL1Q9UK58 526 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 FZD4Q9ULV1 537 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 B3GNT3Q9Y2A9 372 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 ENTPD2Q9Y5L3 495 aa5.51□□□□□ -1.53
HMGB1P10-201ENST00000395823 PRYO14603 147 aa5.5□□□□□ -1.53
HMGB1P10-201ENST00000395823 TGFB1I1O43294 461 aa5.5□□□□□ -1.53
HMGB1P10-201ENST00000395823 URI1O94763 535 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P10-201ENST00000395823 METTL18O95568 372 aa5.5□□□□□ -1.53
HMGB1P10-201ENST00000395823 DLDP09622 509 aaKnown RBP5.5□□□□□ -1.53
HMGB1P10-201ENST00000395823 SFPQP23246 707 aaKnown RBP eCLIP5.5□□□□□ -1.53
HMGB1P10-201ENST00000395823 RPS6KB1P23443 525 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms