RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 TMEM215Q68D42 235 aa14.25□□□□□ -0.13
CXCL12-205ENST00000395794 MBLAC2Q68D91 279 aa14.25□□□□□ -0.13
CXCL12-205ENST00000395794 NADSYN1Q6IA69 706 aa14.25□□□□□ -0.13
CXCL12-205ENST00000395794 METTL3Q86U44 580 aaKnown RBP14.25□□□□□ -0.13
CXCL12-205ENST00000395794 CHSY1Q86X52 802 aa14.25□□□□□ -0.13
CXCL12-205ENST00000395794 ZDHHC17Q8IUH5 632 aa14.25□□□□□ -0.13
CXCL12-205ENST00000395794 CARNMT1Q8N4J0 409 aa14.25□□□□□ -0.13
CXCL12-205ENST00000395794 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.25□□□□□ -0.13
CXCL12-205ENST00000395794 MSANTD4Q8NCY6 345 aa14.25□□□□□ -0.13
CXCL12-205ENST00000395794 C1orf131Q8NDD1 294 aaKnown RBP14.25□□□□□ -0.13
CXCL12-205ENST00000395794 FIBINQ8TAL6 211 aa14.25□□□□□ -0.13
CXCL12-205ENST00000395794 CYB5D2Q8WUJ1 264 aa14.25□□□□□ -0.13
CXCL12-205ENST00000395794 FOXJ1Q92949 421 aa14.25□□□□□ -0.13
CXCL12-205ENST00000395794 LSM14BQ9BX40 385 aaKnown RBP14.25□□□□□ -0.13
CXCL12-205ENST00000395794 SLC6A17Q9H1V8 727 aa14.25□□□□□ -0.13
CXCL12-205ENST00000395794 TMEM9BQ9NQ34 198 aa14.25□□□□□ -0.13
CXCL12-205ENST00000395794 ANO10Q9NW15 660 aa14.25□□□□□ -0.13
CXCL12-205ENST00000395794 DDIT4Q9NX09 232 aa14.25□□□□□ -0.13
CXCL12-205ENST00000395794 TAB2Q9NYJ8 693 aa14.25□□□□□ -0.13
CXCL12-205ENST00000395794 EVLQ9UI08 416 aaPredicted RBP14.25□□□□□ -0.13
CXCL12-205ENST00000395794 AJAP1Q9UKB5 411 aaPredicted RBP14.25□□□□□ -0.13
CXCL12-205ENST00000395794 DCHS1Q96JQ0 3298 aa14.25□□□□□ -0.13
CXCL12-205ENST00000395794 EML5Q05BV3 1969 aa14.24□□□□□ -0.13
CXCL12-205ENST00000395794 SYNJ2BP-COX16A0A087WUM0 186 aa14.24□□□□□ -0.13
CXCL12-205ENST00000395794 LNP1A1A4G5 178 aa14.24□□□□□ -0.13
CXCL12-205ENST00000395794 PATE3B3GLJ2 98 aa14.24□□□□□ -0.13
CXCL12-205ENST00000395794 F5H5T6 163 aa14.24□□□□□ -0.13
CXCL12-205ENST00000395794 H0Y626 953 aa14.24□□□□□ -0.13
CXCL12-205ENST00000395794 MBD3O95983 291 aa14.24□□□□□ -0.13
CXCL12-205ENST00000395794 CFIP05156 583 aa14.24□□□□□ -0.13
CXCL12-205ENST00000395794 PNMA6AP0CW24 399 aaPredicted RBP14.24□□□□□ -0.13
CXCL12-205ENST00000395794 ITPKAP23677 461 aa14.24□□□□□ -0.13
CXCL12-205ENST00000395794 CD70P32970 193 aa14.24□□□□□ -0.13
CXCL12-205ENST00000395794 ATXN3P54252 364 aaPredicted RBP14.24□□□□□ -0.13
CXCL12-205ENST00000395794 RPS24P62847 133 aaKnown RBP14.24□□□□□ -0.13
CXCL12-205ENST00000395794 IRX4P78413 519 aa14.24□□□□□ -0.13
CXCL12-205ENST00000395794 SLC6A3Q01959 620 aa14.24□□□□□ -0.13
CXCL12-205ENST00000395794 TAF5Q15542 800 aa14.24□□□□□ -0.13
CXCL12-205ENST00000395794 WDR45BQ5MNZ6 344 aa14.24□□□□□ -0.13
CXCL12-205ENST00000395794 FAM183BPQ6ZVS7 135 aa14.24□□□□□ -0.13
CXCL12-205ENST00000395794 KIAA0907Q7Z7F0 614 aaPredicted RBP14.24□□□□□ -0.13
CXCL12-205ENST00000395794 ADIPOR2Q86V24 386 aa14.24□□□□□ -0.13
CXCL12-205ENST00000395794 RGL4Q8IZJ4 473 aa14.24□□□□□ -0.13
CXCL12-205ENST00000395794 LGI2Q8N0V4 545 aa14.24□□□□□ -0.13
CXCL12-205ENST00000395794 DEFB106AQ8N104 65 aa14.24□□□□□ -0.13
CXCL12-205ENST00000395794 CFAP52Q8N1V2 620 aa14.24□□□□□ -0.13
CXCL12-205ENST00000395794 OR2T3Q8NH03 318 aa14.24□□□□□ -0.13
CXCL12-205ENST00000395794 GPT2Q8TD30 523 aa14.24□□□□□ -0.13
CXCL12-205ENST00000395794 HSPA12BQ96MM6 686 aa14.24□□□□□ -0.13
CXCL12-205ENST00000395794 STK33Q9BYT3 514 aa14.24□□□□□ -0.13
CXCL12-205ENST00000395794 MKRN2Q9H000 416 aaKnown RBP14.24□□□□□ -0.13
CXCL12-205ENST00000395794 NUCKS1Q9H1E3 243 aaKnown RBP14.24□□□□□ -0.13
CXCL12-205ENST00000395794 VPS16Q9H269 839 aa14.24□□□□□ -0.13
CXCL12-205ENST00000395794 FBRSQ9HAH7 460 aa14.24□□□□□ -0.13
CXCL12-205ENST00000395794 ITM2CQ9NQX7 267 aa14.24□□□□□ -0.13
CXCL12-205ENST00000395794 COX16Q9P0S2 106 aa14.24□□□□□ -0.13
CXCL12-205ENST00000395794 SUN2Q9UH99 717 aa14.24□□□□□ -0.13
CXCL12-205ENST00000395794 PILRBQ9UKJ0 227 aa14.24□□□□□ -0.13
CXCL12-205ENST00000395794 C4orf47A7E2U8 309 aa14.23□□□□□ -0.13
CXCL12-205ENST00000395794 KCNU1A8MYU2 1149 aa14.23□□□□□ -0.13
CXCL12-205ENST00000395794 GRAP2O75791 330 aa14.23□□□□□ -0.13
CXCL12-205ENST00000395794 LUC7L3O95232 432 aaKnown RBP14.23□□□□□ -0.13
CXCL12-205ENST00000395794 IGLV3-25P01717 112 aa14.23□□□□□ -0.13
CXCL12-205ENST00000395794 ASLP04424 464 aa14.23□□□□□ -0.13
CXCL12-205ENST00000395794 UCHL3P15374 230 aa14.23□□□□□ -0.13
CXCL12-205ENST00000395794 CYP11B1P15538 503 aa14.23□□□□□ -0.13
CXCL12-205ENST00000395794 GNSP15586 552 aa14.23□□□□□ -0.13
CXCL12-205ENST00000395794 TACR2P21452 398 aa14.23□□□□□ -0.13
CXCL12-205ENST00000395794 GFPT1Q06210 699 aaPredicted RBP14.23□□□□□ -0.13
CXCL12-205ENST00000395794 KCNMA1Q12791 1236 aa14.23□□□□□ -0.13
CXCL12-205ENST00000395794 NME3Q13232 169 aa14.23□□□□□ -0.13
CXCL12-205ENST00000395794 STX1AQ16623 288 aa14.23□□□□□ -0.13
CXCL12-205ENST00000395794 DUOXA1Q1HG43 343 aa14.23□□□□□ -0.13
CXCL12-205ENST00000395794 RABGAP1LQ5R372 815 aa14.23□□□□□ -0.13
CXCL12-205ENST00000395794 RNF219Q5W0B1 726 aaPredicted RBP14.23□□□□□ -0.13
CXCL12-205ENST00000395794 RAP1GAP2Q684P5 730 aa14.23□□□□□ -0.13
CXCL12-205ENST00000395794 SND1Q7KZF4 910 aaKnown RBP eCLIP14.23□□□□□ -0.13
CXCL12-205ENST00000395794 TOE1Q96GM8 510 aaKnown RBP14.23□□□□□ -0.13
CXCL12-205ENST00000395794 PCMTD1Q96MG8 357 aaPredicted RBP14.23□□□□□ -0.13
CXCL12-205ENST00000395794 PRICKLE1Q96MT3 831 aaPredicted RBP14.23□□□□□ -0.13
CXCL12-205ENST00000395794 SLC2A13Q96QE2 648 aa14.23□□□□□ -0.13
CXCL12-205ENST00000395794 NUP58Q9BVL2 599 aa14.23□□□□□ -0.13
CXCL12-205ENST00000395794 PLCB1Q9NQ66 1216 aa14.23□□□□□ -0.13
CXCL12-205ENST00000395794 TMEM74BQ9NUR3 256 aa14.23□□□□□ -0.13
CXCL12-205ENST00000395794 RRN3Q9NYV6 651 aa14.23□□□□□ -0.13
CXCL12-205ENST00000395794 KIAA1522Q9P206 1035 aaPredicted RBP14.23□□□□□ -0.13
CXCL12-205ENST00000395794 SUSD2Q9UGT4 822 aa14.23□□□□□ -0.13
CXCL12-205ENST00000395794 SLC6A14Q9UN76 642 aa14.23□□□□□ -0.13
CXCL12-205ENST00000395794 FHOD1Q9Y613 1164 aa14.23□□□□□ -0.13
CXCL12-205ENST00000395794 CEP250Q9BV73 2442 aa14.23□□□□□ -0.13
CXCL12-205ENST00000395794 ATXN2Q99700 1313 aaKnown RBP14.22□□□□□ -0.13
CXCL12-205ENST00000395794 MEI4A8MW99 385 aa14.22□□□□□ -0.13
CXCL12-205ENST00000395794 ERBB2P04626 1255 aa14.22□□□□□ -0.13
CXCL12-205ENST00000395794 HLA-EP13747 358 aa14.22□□□□□ -0.13
CXCL12-205ENST00000395794 CDK11BP21127 795 aaKnown RBP14.22□□□□□ -0.13
CXCL12-205ENST00000395794 NOS2P35228 1153 aa14.22□□□□□ -0.13
CXCL12-205ENST00000395794 TPMTP51580 245 aa14.22□□□□□ -0.13
CXCL12-205ENST00000395794 OXCT1P55809 520 aa14.22□□□□□ -0.13
CXCL12-205ENST00000395794 CAMK2GQ13555 558 aaPredicted RBP14.22□□□□□ -0.13
CXCL12-205ENST00000395794 TTC39BQ5VTQ0 682 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms