RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 SNX10Q9Y5X0 201 aa17.14■□□□□ 0.33
CXCL1-201ENST00000395761 HS3ST4Q9Y661 456 aa17.14■□□□□ 0.33
CXCL1-201ENST00000395761 PRRT4C9JH25 899 aa17.13■□□□□ 0.33
CXCL1-201ENST00000395761 CHRM1P11229 460 aaPredicted RBP17.13■□□□□ 0.33
CXCL1-201ENST00000395761 TNFRSF4P43489 277 aa17.13■□□□□ 0.33
CXCL1-201ENST00000395761 ZNF143P52747 638 aaPredicted RBP17.13■□□□□ 0.33
CXCL1-201ENST00000395761 AUHQ13825 339 aaKnown RBP17.13■□□□□ 0.33
CXCL1-201ENST00000395761 FBXO43Q4G163 708 aa17.13■□□□□ 0.33
CXCL1-201ENST00000395761 C2orf27AQ580R0 203 aa17.13■□□□□ 0.33
CXCL1-201ENST00000395761 BRMS1LQ5PSV4 323 aa17.13■□□□□ 0.33
CXCL1-201ENST00000395761 RNF43Q68DV7 783 aa17.13■□□□□ 0.33
CXCL1-201ENST00000395761 TERB1Q8NA31 727 aa17.13■□□□□ 0.33
CXCL1-201ENST00000395761 HJURPQ8NCD3 748 aaPredicted RBP17.13■□□□□ 0.33
CXCL1-201ENST00000395761 WFDC5Q8TCV5 224 aa17.13■□□□□ 0.33
CXCL1-201ENST00000395761 USP33Q8TEY7 942 aa17.13■□□□□ 0.33
CXCL1-201ENST00000395761 FAM172AQ8WUF8 416 aa17.13■□□□□ 0.33
CXCL1-201ENST00000395761 SIK2Q9H0K1 926 aa17.13■□□□□ 0.33
CXCL1-201ENST00000395761 THAP2Q9H0W7 228 aa17.13■□□□□ 0.33
CXCL1-201ENST00000395761 ZDHHC4Q9NPG8 344 aa17.13■□□□□ 0.33
CXCL1-201ENST00000395761 HCN2Q9UL51 889 aa17.13■□□□□ 0.33
CXCL1-201ENST00000395761 SSU72P8A0A1W2PR75 194 aa17.12■□□□□ 0.33
CXCL1-201ENST00000395761 ANKRD62A6NC57 917 aa17.12■□□□□ 0.33
CXCL1-201ENST00000395761 TMEM191CA6NGB0 347 aa17.12■□□□□ 0.33
CXCL1-201ENST00000395761 F5H5T6 163 aa17.12■□□□□ 0.33
CXCL1-201ENST00000395761 CCP110O43303 1012 aa17.12■□□□□ 0.33
CXCL1-201ENST00000395761 MYBL1P10243 752 aa17.12■□□□□ 0.33
CXCL1-201ENST00000395761 HOXC13P31276 330 aa17.12■□□□□ 0.33
CXCL1-201ENST00000395761 IRAK1P51617 712 aa17.12■□□□□ 0.33
CXCL1-201ENST00000395761 HDAC4P56524 1084 aa17.12■□□□□ 0.33
CXCL1-201ENST00000395761 SATB1Q01826 763 aa17.12■□□□□ 0.33
CXCL1-201ENST00000395761 TCF15Q12870 199 aa17.12■□□□□ 0.33
CXCL1-201ENST00000395761 GEN1Q17RS7 908 aa17.12■□□□□ 0.33
CXCL1-201ENST00000395761 C10orf76Q5T2E6 689 aa17.12■□□□□ 0.33
CXCL1-201ENST00000395761 MPP7Q5T2T1 576 aa17.12■□□□□ 0.33
CXCL1-201ENST00000395761 FBXL22Q6P050 247 aa17.12■□□□□ 0.33
CXCL1-201ENST00000395761 MAMSTRQ6ZN01 415 aa17.12■□□□□ 0.33
CXCL1-201ENST00000395761 STRADAQ7RTN6 431 aa17.12■□□□□ 0.33
CXCL1-201ENST00000395761 LRRC8AQ8IWT6 810 aa17.12■□□□□ 0.33
CXCL1-201ENST00000395761 SPEM1Q8N4L4 309 aa17.12■□□□□ 0.33
CXCL1-201ENST00000395761 RPLP0P6Q8NHW5 317 aa17.12■□□□□ 0.33
CXCL1-201ENST00000395761 IGSF8Q969P0 613 aa17.12■□□□□ 0.33
CXCL1-201ENST00000395761 SLC2A11Q9BYW1 496 aa17.12■□□□□ 0.33
CXCL1-201ENST00000395761 IRX2Q9BZI1 471 aaPredicted RBP17.12■□□□□ 0.33
CXCL1-201ENST00000395761 NHEJ1Q9H9Q4 299 aaPredicted RBP17.12■□□□□ 0.33
CXCL1-201ENST00000395761 SLC27A6Q9Y2P4 619 aa17.12■□□□□ 0.33
CXCL1-201ENST00000395761 KIAA1549LQ6ZVL6 1849 aa17.12■□□□□ 0.33
CXCL1-201ENST00000395761 CHURC1-FNTBB4DL54 471 aa17.11■□□□□ 0.33
CXCL1-201ENST00000395761 AKR1B10O60218 316 aa17.11■□□□□ 0.33
CXCL1-201ENST00000395761 HLA-FP30511 346 aa17.11■□□□□ 0.33
CXCL1-201ENST00000395761 ADRA1BP35368 520 aa17.11■□□□□ 0.33
CXCL1-201ENST00000395761 TIE1P35590 1138 aa17.11■□□□□ 0.33
CXCL1-201ENST00000395761 KIR2DL1P43626 348 aaPredicted RBP17.11■□□□□ 0.33
CXCL1-201ENST00000395761 GALCP54803 685 aa17.11■□□□□ 0.33
CXCL1-201ENST00000395761 ZNF252P-AS1Q0IIN9 211 aa17.11■□□□□ 0.33
CXCL1-201ENST00000395761 ANGPT1Q15389 498 aa17.11■□□□□ 0.33
CXCL1-201ENST00000395761 SLC18A3Q16572 532 aa17.11■□□□□ 0.33
CXCL1-201ENST00000395761 PREPLQ4J6C6 727 aaPredicted RBP17.11■□□□□ 0.33
CXCL1-201ENST00000395761 TSSK4Q6SA08 328 aa17.11■□□□□ 0.33
CXCL1-201ENST00000395761 CIR1Q86X95 450 aaPredicted RBP17.11■□□□□ 0.33
CXCL1-201ENST00000395761 TMTC1Q8IUR5 882 aa17.11■□□□□ 0.33
CXCL1-201ENST00000395761 ZNF683Q8IZ20 524 aa17.11■□□□□ 0.33
CXCL1-201ENST00000395761 CARNMT1Q8N4J0 409 aa17.11■□□□□ 0.33
CXCL1-201ENST00000395761 CCDC33Q8N5R6 958 aa17.11■□□□□ 0.33
CXCL1-201ENST00000395761 CCDC185Q8N715 623 aa17.11■□□□□ 0.33
CXCL1-201ENST00000395761 ARHGEF26Q96DR7 871 aa17.11■□□□□ 0.33
CXCL1-201ENST00000395761 TRIM11Q96F44 468 aa17.11■□□□□ 0.33
CXCL1-201ENST00000395761 CNPY3Q9BT09 278 aa17.11■□□□□ 0.33
CXCL1-201ENST00000395761 PACSIN1Q9BY11 444 aa17.11■□□□□ 0.33
CXCL1-201ENST00000395761 MAGEB5Q9BZ81 275 aa17.11■□□□□ 0.33
CXCL1-201ENST00000395761 DEF6Q9H4E7 631 aa17.11■□□□□ 0.33
CXCL1-201ENST00000395761 TMEM51Q9NW97 253 aa17.11■□□□□ 0.33
CXCL1-201ENST00000395761 VANGL2Q9ULK5 521 aa17.11■□□□□ 0.33
CXCL1-201ENST00000395761 HCN4Q9Y3Q4 1203 aa17.11■□□□□ 0.33
CXCL1-201ENST00000395761 PAXBP1Q9Y5B6 917 aa17.11■□□□□ 0.33
CXCL1-201ENST00000395761 ATG2BQ96BY7 2078 aa17.11■□□□□ 0.33
CXCL1-201ENST00000395761 H0Y858 1186 aa17.1■□□□□ 0.33
CXCL1-201ENST00000395761 LAMTOR5O43504 91 aa17.1■□□□□ 0.33
CXCL1-201ENST00000395761 CYP1A2P05177 515 aa17.1■□□□□ 0.33
CXCL1-201ENST00000395761 PSMA2P25787 234 aa17.1■□□□□ 0.33
CXCL1-201ENST00000395761 CXCL12P48061 93 aa17.1■□□□□ 0.33
CXCL1-201ENST00000395761 MTA1Q13330 715 aa17.1■□□□□ 0.33
CXCL1-201ENST00000395761 FSCBQ5H9T9 825 aa17.1■□□□□ 0.33
CXCL1-201ENST00000395761 ARTNQ5T4W7 220 aa17.1■□□□□ 0.33
CXCL1-201ENST00000395761 TMEM215Q68D42 235 aa17.1■□□□□ 0.33
CXCL1-201ENST00000395761 TMEM139Q8IV31 216 aa17.1■□□□□ 0.33
CXCL1-201ENST00000395761 MFN1Q8IWA4 741 aa17.1■□□□□ 0.33
CXCL1-201ENST00000395761 ALLCQ8N6M5 410 aa17.1■□□□□ 0.33
CXCL1-201ENST00000395761 CCDC42Q96M95 316 aa17.1■□□□□ 0.33
CXCL1-201ENST00000395761 RPRD1AQ96P16 312 aaPredicted RBP17.1■□□□□ 0.33
CXCL1-201ENST00000395761 BAG1Q99933 345 aaPredicted RBP17.1■□□□□ 0.33
CXCL1-201ENST00000395761 IER2Q9BTL4 223 aa17.1■□□□□ 0.33
CXCL1-201ENST00000395761 ABCB8Q9NUT2 735 aa17.1■□□□□ 0.33
CXCL1-201ENST00000395761 SPTLC3Q9NUV7 552 aa17.1■□□□□ 0.33
CXCL1-201ENST00000395761 CACNA1IQ9P0X4 2223 aa17.09■□□□□ 0.33
CXCL1-201ENST00000395761 TYW5A2RUC4 315 aaKnown RBP17.09■□□□□ 0.33
CXCL1-201ENST00000395761 ATG13O75143 517 aa17.09■□□□□ 0.33
CXCL1-201ENST00000395761 LUC7L3O95232 432 aaKnown RBP17.09■□□□□ 0.33
CXCL1-201ENST00000395761 KLF8O95600 359 aaPredicted RBP17.09■□□□□ 0.33
CXCL1-201ENST00000395761 CD70P32970 193 aa17.09■□□□□ 0.33
CXCL1-201ENST00000395761 MRPS21P82921 87 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms